ID EF467923; SV 1; linear; genomic RNA; STD; VRL; 2674 BP. XX AC EF467923; XX DT 01-APR-2008 (Rel. 95, Created) DT 19-JUN-2008 (Rel. 96, Last updated, Version 2) XX DE Pineapple mealybug wilt-associated virus 1 clone pPMW313 helicase and RNA DE dependant RNA polymerase genes, partial cds; unknown protein gene, complete DE cds; and heat shock 70-like protein gene, partial cds. XX KW . XX OS Pineapple mealybug wilt-associated virus 1 OC Viruses; Riboviria; Closteroviridae; Ampelovirus. XX RN [1] RP 1-2674 RA Gambley C.F., Steele V., Geering A.D.W., Thomas J.E.; RT "The genetic diversity of ampeloviruses in Australian pineapples and their RT association with mealybug wilt disease"; RL Australas. Plant Pathol. 37:95-105(2008). XX RN [2] RP 1-2674 RA Gambley C.F., Steele V., Geering A.D.W., Thomas J.E.; RT ; RL Submitted (03-MAR-2007) to the INSDC. RL Department of Primary Industries and Fisheries, 80 Meiers Rd, RL Indooroopilly, Brisbane, QLD 4068, Australia XX DR MD5; f60799a2cedff24af14f8c3909e7e9b4. XX FH Key Location/Qualifiers FH FT source 1..2674 FT /organism="Pineapple mealybug wilt-associated virus 1" FT /host="Ananas comosus F180" FT /isolate="A3" FT /mol_type="genomic RNA" FT /country="Australia" FT /clone="pPMW313" FT /db_xref="taxon:180903" FT CDS <1..303 FT /codon_start=1 FT /product="helicase" FT /note="ORF1a" FT /db_xref="GOA:B2BD47" FT /db_xref="InterPro:IPR027351" FT /db_xref="UniProtKB/TrEMBL:B2BD47" FT /protein_id="ABR68933.1" FT /translation="ISEYMSRGLGTIQDARALIGTVAESQGETYGRVHLVAFKPTDDQV FT FSSMPHRLVALSRHTISLQYFCIPNKMNKGIGEDVQSIIKLEERVAANFVVQQCV" FT CDS <302..1864 FT /codon_start=1 FT /product="RNA dependant RNA polymerase" FT /note="RdRp; ORF1b; presumably translated by a +1 ribosomal FT frameshift" FT /db_xref="GOA:B2BD48" FT /db_xref="InterPro:IPR001788" FT /db_xref="InterPro:IPR007094" FT /db_xref="UniProtKB/TrEMBL:B2BD48" FT /protein_id="ABR68934.1" FT /translation="NIYLPCKDMVIPMPLGLGRPPKAHFEAIQSFLDDTLNGVGSLLFL FT NTEEQFQMTDTVTNITDFSLSDNDVRFKPIKFFSNQPRIRSQMGVRRQNTLKANILAYE FT KRNAGVVKTLWHPDVTDEVMAVVDDFFGSYVDSRKLSEVLVDPVEPNVFDLADWLLSRT FT PMGKKALMMELENPVELGANLNRFKLMVKADVKFKTDLECLSEVPSGQNIVFHDRAICA FT HFSVCFREMVNRLRTVVHKNIVLFNGLSFEEFADQLSAALNDESIDTFNCDEVDISKYD FT KSQSTFTKAVELEIYRRLGLPEKILQTWAASEFFGKAVTNKRSFSAEVYAQRRTGAANT FT WIGNTVINMMLLSQSVDVTSLNAVCFAGDDSLILKKGVPGVNFDVYDLKYEFDVKYFDC FT ASKYFCGKFLIENSGKIKVMPDPFKIFVKLGKERPVSDKILLEQWQSFFDITEAYTSDA FT NISKLVSSFANKWVSSPHAYESFCTINSLRSNPEQFKRLWFDLYTHNHSRFETQGRFND FT KSG" FT CDS 1848..2003 FT /codon_start=1 FT /product="unknown protein" FT /note="ORF2" FT /db_xref="GOA:B2BD49" FT /db_xref="UniProtKB/TrEMBL:B2BD49" FT /protein_id="ABR68935.1" FT /translation="MIRVDNFLWAIYLVTFIALCAIIIVLILLFQRVLWPNSLPPNNPV FT PHGGGY" FT CDS 1987..>2674 FT /codon_start=1 FT /product="heat shock 70-like protein" FT /note="HSP70" FT /db_xref="GOA:B2BD50" FT /db_xref="InterPro:IPR013126" FT /db_xref="InterPro:IPR018181" FT /db_xref="UniProtKB/TrEMBL:B2BD50" FT /protein_id="ABR68936.1" FT /translation="MEVGIDFGTTYSTLCFSPGKGNHGCVVESDTIFIPTVVGYRKDNT FT HAIGLGALLEKDLVVYRDIKRYFGLNKFNKDVYLSKLKPSIEVVIDDWGCSIGPVDGTK FT GKAKSVLTLASDFITGLVQLAIKMTNQQVSVSVCSVPAAYNSYQRSFIFESCKLSSINV FT QAVVNEPTAAGLSAFITTPKASVNYLLVYDFGGGTFDSSLLVVGPAYVGVLDSMGDNYL FT GGRDVDN" XX SQ Sequence 2674 BP; 767 A; 481 C; 642 G; 783 T; 1 other; atctcagaat acatgagcag ggggttaggg actattcaag atgcaagagc tttaatcggt 60 actgtagctg aatcacaagg tgaaacttac gggagagtgc atttagttgc gttcaaacca 120 acggacgatc aagtgttttc ttccatgccg catagattgg tggccttatc cagacatact 180 atcagtttgc agtacttttg tatacccaac aagatgaaca agggtatagg tgaagatgtg 240 cagtctataa tcaagctgga ggaaagagtc gctgcgaatt ttgtagtcca gcagtgcgtt 300 taacatttat cttccgtgta aggatatggt catcccaatg ccgttaggtt tgggaaggcc 360 tccaaaagct cacttcgaag cgattcaaag ttttctcgac gacacactga acggagtcgg 420 gtctttattg ttccttaaca cggaagagca gtttcaaatg acggataccg tcaccaacat 480 cacagatttt tccctgagtg ataacgatgt tcgctttaaa ccgattaagt ttttctctaa 540 tcaaccgcgg atcagatcac agatgggagt acgtagacag aatactttga aagcaaacat 600 cctggcctac gaaaagagga atgcgggagt agttaaaacc ttgtggcatc cggatgtgac 660 agacgaagta atggctgtgg tagacgactt cttcggatca tacgttgatt cccgaaaact 720 gagtgaggtg ttggtggatc ctgtagaacc aaatgtattt gatttagctg actggttgtt 780 gagcaggact ccaatgggaa agaaagcttt aatgatggaa ttagagaatc ctgttgaact 840 aggtgcgaat ttgaataggt tcaaactgat ggttaaggca gacgtaaaat ttaagacaga 900 tttggagtgt ctgtcggaag tgccatctgg tcaraatatt gttttccacg atagagctat 960 atgtgcacac ttctctgtgt gttttagaga aatggtcaat agattgcgga cggtcgtgca 1020 caaaaatatt gtacttttca acggattgag ttttgaggag ttcgctgatc agttgagcgc 1080 ggcacttaac gatgagtcga tcgacacatt caattgcgac gaagtagaca tctccaaata 1140 cgacaaatct caatccacat ttacaaaagc tgtggaattg gaaatctaca ggaggttagg 1200 tttgccagaa aagattcttc aaacctgggc agctagcgaa ttctttggca aagccgttac 1260 taataagaga tcattttctg cggaggtata cgctcaacgt cgcacaggag ccgcgaacac 1320 atggatagga aacactgtga ttaatatgat gttgctttca caaagtgtgg acgtgacatc 1380 attgaatgct gtctgttttg ccggcgacga ttcactgatt ctcaagaaag gtgttcctgg 1440 cgtcaacttc gacgtctacg atttgaagta cgagttcgat gttaaatact tcgattgtgc 1500 ttctaaatat ttttgtggaa aatttttaat tgaaaactca ggaaagatta aagtgatgcc 1560 cgatcctttc aaaatttttg tgaaacttgg taaagaacga cctgtatcag ataagatttt 1620 gctggagcag tggcagtctt ttttcgatat aaccgaagcc tacacgtcag acgccaacat 1680 atctaagttg gtatcaagtt tcgcaaacaa atgggtgtca tctccacatg cttacgaaag 1740 cttttgtacc ataaattctt tacgcagcaa cccagaacag ttcaagaggt tgtggtttga 1800 tttatatact cataaccatt ccaggtttga aacgcaggga aggtttaatg ataagagtgg 1860 ataattttct ttgggcaata tacttggtaa ctttcatagc actttgcgca attatcatcg 1920 ttttgatatt gttgtttcag agggtgcttt ggccgaatag tctaccacca aacaatcctg 1980 taccacatgg aggtgggtat tgattttggt accacttatt ccactctgtg tttctctcct 2040 ggaaaaggaa atcatggctg cgtagtagag agtgacacaa ttttcatacc tactgtcgtt 2100 ggttatagaa aggacaacac tcatgccata ggtttaggag cattgttgga aaaggatttg 2160 gtggtttatc gtgacataaa aaggtatttc gggctcaaca agtttaacaa ggatgtgtac 2220 ctcagtaaat tgaaaccttc aatcgaggta gtgattgatg attggggttg ttctatagga 2280 ccagtggatg gtacaaaagg gaaagccaaa tcggttctca ctttagcctc tgattttata 2340 acgggattgg tacaactagc gatcaagatg acaaatcaac aggtgtctgt gtctgtctgt 2400 tcagtaccag cagcttacaa ttcttatcag aggagtttca tttttgaaag ttgtaagttg 2460 agttctataa atgtgcaggc cgtggtgaac gagccgaccg cagctggatt gagtgctttc 2520 ataactaccc cgaaagcttc tgtgaattat ttgttggtct acgatttcgg aggaggtact 2580 tttgatagtt ccttacttgt ggttgggcct gcgtacgtgg gagtactgga ttcgatggga 2640 gataattatc tgggaggccg agacgtagac aaca 2674 //