ID   EF467920; SV 1; linear; genomic RNA; STD; VRL; 1751 BP.
XX
AC   EF467920;
XX
DT   01-APR-2008 (Rel. 95, Created)
DT   19-JUN-2008 (Rel. 96, Last updated, Version 2)
XX
DE   Pineapple mealybug wilt-associated virus 5 clone pDF1R248 RNA dependant RNA
DE   polymerase gene, partial cds; unknown protein gene, complete cds; and heat
DE   shock 70-like protein gene, partial cds.
XX
KW   .
XX
OS   Pineapple mealybug wilt-associated virus 5
OC   Viruses; Riboviria; Closteroviridae; Ampelovirus; unclassified Ampelovirus.
XX
RN   [1]
RP   1-1751
RA   Gambley C.F., Steele V., Geering A.D.W., Thomas J.E.;
RT   "The genetic diversity of ampeloviruses in Australian pineapples and their
RT   association with mealybug wilt disease";
RL   Australas. Plant Pathol. 37:95-105(2008).
XX
RN   [2]
RP   1-1751
RA   Gambley C.F., Steele V., Geering A.D.W., Thomas J.E.;
RT   ;
RL   Submitted (02-MAR-2007) to the INSDC.
RL   Department of Primary Industries and Fisheries, 80 Meiers Rd,
RL   Indooroopilly, Brisbane, QLD 4068, Australia
XX
DR   MD5; 5061a1108daf3ca148c8bb15d67bf3d8.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1751
FT                   /organism="Pineapple mealybug wilt-associated virus 5"
FT                   /host="Ananas comosus commercial hybrid"
FT                   /isolate="A1"
FT                   /mol_type="genomic RNA"
FT                   /country="Australia"
FT                   /clone="pDF1R248"
FT                   /db_xref="taxon:451381"
FT   CDS             <1..1216
FT                   /codon_start=2
FT                   /product="RNA dependant RNA polymerase"
FT                   /note="RdRp; ORF1b; presumably translated by a +1 ribosomal
FT                   frameshift"
FT                   /db_xref="GOA:B2BD41"
FT                   /db_xref="InterPro:IPR001788"
FT                   /db_xref="InterPro:IPR007094"
FT                   /db_xref="UniProtKB/TrEMBL:B2BD41"
FT                   /protein_id="ABR68927.1"
FT                   /translation="AGVVKSYWHPDVNDEVMCLVDDFFASYVDSRKLQELLSDPVEPNS
FT                   KDLCDWFIGRTPMGKAGLVKELQLPVTLDSNMNRFKLMVKSDVKFKTELECLSELPAGQ
FT                   NIVFHDRAICAHFSVCFKTLVDRLRVCLHPKFILFNGLSFEEFANSLDAALNDVPINHF
FT                   KCDEVDISKYDKSQSTFTKAVELEIYRRLGLSQHVLDVWGSSEFYGRAVTNRRSFSAEL
FT                   YSQRRTGAANTWIGNTLVNMVLLSHACDVNTFDAVAFAGDDSLILKRDVPGVHYDVYDS
FT                   KYEFDVKYYSEATPYFCGKFLLWDGTKTVVMPDPFKIFVKFGRERPPEDEVLKELWRSF
FT                   FDVTRNYDSEHNVRTLSLLLGVKWANSVHAYNACCTINSLRSNPEQFKRLWFNVFKANS
FT                   ASGRL"
FT   CDS             1179..1382
FT                   /codon_start=1
FT                   /product="unknown protein"
FT                   /note="ORF2"
FT                   /db_xref="GOA:B2BD42"
FT                   /db_xref="UniProtKB/TrEMBL:B2BD42"
FT                   /protein_id="ABR68928.1"
FT                   /translation="MCLKLTLLQGDYEIEAMLVIENFAWAIYLLTFITIVAIIIVLGVL
FT                   FQRVFLDTRARNPQPVPHGDRY"
FT   CDS             1366..>1751
FT                   /codon_start=1
FT                   /product="heat shock 70-like protein"
FT                   /note="HSP70"
FT                   /db_xref="UniProtKB/TrEMBL:B2BD43"
FT                   /protein_id="ABR68929.1"
FT                   /translation="MEIGIDFGTTYSTLCFSPGRGVEGCVPESSSIYIPTVVGFRSDGT
FT                   YTVGSGALLEPDLDLYRDIKRFFGVNYLNKDRLLKKLKPSFEVVVDEWGCSIGPSNGKR
FT                   GLTKSVVALASLFISGLVSLAIKMT"
XX
SQ   Sequence 1751 BP; 463 A; 324 C; 424 G; 540 T; 0 other;
     cgccggggtc gttaagagtt actggcaccc ggacgtgaat gatgaagtaa tgtgtctcgt        60
     tgatgacttt ttcgctagtt atgtggattc caggaaactg caggaattat tatctgatcc       120
     agtagaacca aattcgaaag atttatgtga ctggtttata ggtcgaactc cgatggggaa       180
     ggctggattg gtaaaagaac tacaattacc agttacgtta gactcaaata tgaacagatt       240
     caaactcatg gttaagtctg acgtaaagtt taaaacagaa ttggaatgtt tgtctgagtt       300
     gcctgcaggt caaaatattg tgttccatga tagagcaata tgtgctcact tttcagtatg       360
     ttttaaaact ttggtggacc gtttaagagt ttgcttacac cccaagttta ttcttttcaa       420
     cggtctatct ttcgaggagt ttgcgaacag tctggatgcc gccttgaatg atgtgcctat       480
     caatcacttt aaatgtgacg aggtggatat ttctaagtac gacaagtccc aatctacttt       540
     tactaaggca gttgaattgg agatctacag aaggttaggt ctatctcaac atgttttaga       600
     tgtgtggggc tctagtgaat tttatggacg ggctgttacg aataggagat ctttttccgc       660
     tgaactatat tctcaacgaa gaacgggcgc agctaatact tggataggca acacactagt       720
     gaacatggtc ttattgagtc acgcttgcga tgtaaacaca ttcgatgctg tagccttcgc       780
     cggagatgat tcactgatcc ttaaaagaga tgttcctggt gtacactatg atgtttacga       840
     ctccaagtat gaatttgatg tgaaatatta cagtgaagct acgccgtatt tttgtggaaa       900
     gtttctgtta tgggacggta cgaaaactgt cgtgatgccc gaccctttca aaatttttgt       960
     gaagtttggt agggaacggc cacctgagga tgaagttctt aaagagttat ggcgttcatt      1020
     ttttgacgtg acacggaact acgactctga gcacaatgtg agaactcttt ctctactgct      1080
     gggggttaag tgggcaaatt ctgttcatgc gtacaacgct tgttgtacta tcaattcgct      1140
     aagaagcaac ccagagcaat tcaagaggtt gtggttcaat gtgtttaaag ctaactctgc      1200
     ttcagggaga ttatgagatc gaggctatgt tagtaatcga gaattttgcg tgggctatat      1260
     acttacttac cttcatcact attgtcgcaa taataatagt gttgggtgta ctctttcaaa      1320
     gagttttctt ggatactcgt gctcgcaatc cgcaacccgt accccatgga gataggtatt      1380
     gattttggaa ccacatactc gaccttgtgt ttctcacccg gccgaggggt ggagggttgt      1440
     gttccggaaa gtagctccat ttacataccg acggtcgttg gttttcgatc cgacggtact      1500
     tatactgtgg gaagcggggc attgttggaa ccggacctag atctctacag ggatataaaa      1560
     aggtttttcg gggtgaatta cctcaacaaa gacagactac taaagaagct caaaccttcc      1620
     tttgaggtcg tcgtggacga atggggctgt agtattggtc cttcgaacgg aaagagaggt      1680
     ttaactaagt ccgttgtcgc cttagcctct cttttcatct ctggtctggt atctttggct      1740
     ataaagatga c                                                           1751
//