ID EF467919; SV 1; linear; genomic RNA; STD; VRL; 2409 BP. XX AC EF467919; XX DT 01-APR-2008 (Rel. 95, Created) DT 19-JUN-2008 (Rel. 96, Last updated, Version 2) XX DE Pineapple mealybug wilt-associated virus 3 clone pB13P4P37 RNA dependant DE RNA polymerase gene, partial cds; unknown protein gene, complete cds; and DE heat shock 70-like protein gene, partial cds. XX KW . XX OS Pineapple mealybug wilt-associated virus 3 OC Viruses; Riboviria; Closteroviridae; Ampelovirus. XX RN [1] RP 1-2409 RA Gambley C.F., Steele V., Geering A.D.W., Thomas J.E.; RT "The genetic diversity of ampeloviruses in Australian pineapples and their RT association with mealybug wilt disease"; RL Australas. Plant Pathol. 37:95-105(2008). XX RN [2] RP 1-2409 RA Gambley C.F., Steele V., Geering A.D.W., Thomas J.E.; RT ; RL Submitted (02-MAR-2007) to the INSDC. RL Department of Primary Industries and Fisheries, 80 Meiers Rd, RL Indooroopilly, Brisbane, QLD 4068, Australia XX DR MD5; 35b413969a7ac3540fb4b73a0311f510. XX FH Key Location/Qualifiers FH FT source 1..2409 FT /organism="Pineapple mealybug wilt-associated virus 3" FT /host="Ananas comosus commercial hybrid" FT /isolate="A1" FT /mol_type="genomic RNA" FT /country="Australia" FT /clone="pB13P4P37" FT /db_xref="taxon:373861" FT CDS <1..1413 FT /codon_start=1 FT /product="RNA dependant RNA polymerase" FT /note="RdRp; ORF1b; presumably translated by a +1 ribosomal FT frameshift" FT /db_xref="GOA:B2BD38" FT /db_xref="InterPro:IPR001788" FT /db_xref="InterPro:IPR007094" FT /db_xref="UniProtKB/TrEMBL:B2BD38" FT /protein_id="ABR68924.1" FT /translation="FQMSDMVTNITDFSMSDNDVRFKSPKFHVFNPRIRSQIVERRQDT FT FKANVLAYEKRNAGVVKSLWHPDVTDEVMTVVDDFFTSYVDSRKLAEITNDAITPNAFD FT LSEWFQSRVPLGKSGLKKALEQPIMLDNNLNRFKLMVKSEVKFKMDSECLTEVPPGQNI FT VFHDRGVCAHFSVCFREIVNRLRCVVHPNVILFNGLSFSEFGEQLYAALDGLPIDDFEC FT DEVDISKYDKSQSTFTKAVELEIYRRLGLPEDILMRWGASEFYGKAVANKRSFAAEIYA FT QRRTGAANTWVGNTLINMVLLSQSTDVSELQAVCFAGDDSLILRKIKPNIDFKTYDMKY FT EFDVKYFDNAATYFCGKFLVPSEGKVVVMPDPFKIFVKFGKERPADDNVVKELWRSFFD FT ITESYQSEVNIQRLLKQFTKKWGYSRHAYESFCAINSLRSNPEQFKRLWATLYETNHNR FT RQLSQSPYDSCG" FT CDS 1397..1552 FT /codon_start=1 FT /product="unknown protein" FT /note="ORF2" FT /db_xref="GOA:B2BD36" FT /db_xref="UniProtKB/TrEMBL:B2BD36" FT /protein_id="ABR68925.1" FT /translation="MIRVDNFLWAIYLLTFITISAIIVVLVVLIQRLLCPTSLPPNAQV FT PHGGGY" FT CDS 1536..>2409 FT /codon_start=1 FT /product="heat shock 70-like protein" FT /note="HSP70" FT /db_xref="GOA:B2BD40" FT /db_xref="InterPro:IPR013126" FT /db_xref="InterPro:IPR018181" FT /db_xref="UniProtKB/TrEMBL:B2BD40" FT /protein_id="ABR68926.1" FT /translation="MEVGIDFGTTYSTLCFSPGKGVDGCVLESGTIYIPTVVGYRTDGS FT FAVGLGALLEHDMTVYRDIKRYFGLNKFNKDTYTSKLKSEVEVVVDDWTCKIGPVDGSK FT GKARSVIALASDFVTGLCAIATKMTGQPVTLSVCSVPAAYNSYLRSFIYESCKLSSINV FT QAVVNEPTAAGLSAFIDIPKSTVNYLLVYDFGGGTFDCSLLVVGASYVCVLDSAGDNYL FT GGRDVDNKLREVCATKLKVDVTLLDSFSMEALKIDLVNKPNKRVRQVLLKSGDVRTVDF FT SQTEFRKLCE" XX SQ Sequence 2409 BP; 702 A; 436 C; 577 G; 694 T; 0 other; tttcaaatga gtgatatggt tactaacatc actgattttt caatgagtga taacgatgtg 60 aggttcaagt cacccaagtt tcatgtattc aatccgagaa tacgttcaca gatagtggaa 120 cgcagacaag atacattcaa agcgaatgtg ctggcgtatg agaagagaaa tgctggtgtg 180 gtcaaatcac tatggcatcc agatgttact gatgaagtga tgaccgtagt agacgatttc 240 tttacatctt atgtggattc acgcaagcta gccgaaatta caaacgatgc cattactcca 300 aacgcgtttg acttgagtga atggtttcaa agtagggttc cacttggtaa gagtgggttg 360 aagaaggcgc ttgaacaacc tataatgtta gataataacc tcaacaggtt caaattgatg 420 gtaaaatcgg aggtgaaatt caagatggac agtgagtgtc ttacggaagt acctccggga 480 cagaatattg tattccatga tagaggtgtg tgtgcacatt tctcagtgtg tttcagagag 540 atcgtcaaca ggctacgttg tgtagtacac cccaacgtga tactttttaa tggacttagt 600 ttctccgaat tcggagaaca actatacgca gcattggatg gtttaccgat agacgacttt 660 gagtgtgatg aagtggatat ttcgaagtat gataaatctc aatcgacatt cacaaaggcg 720 gtggaactcg aaatataccg tcgtctaggt ctaccggaag atatattaat gcggtggggt 780 gccagcgagt tttacgggaa ggctgtggca aacaaacggt cctttgctgc tgagatatat 840 gctcaacgca gaactggggc agcaaacact tgggtgggaa atactttgat caacatggtc 900 ttgctgagtc agagcactga tgtaagcgag ttacaggcag tttgtttcgc cggagacgac 960 tccctcattt tgcggaaaat taaaccaaac atcgatttca aaacctacga tatgaaatat 1020 gaatttgatg tcaaatattt tgacaatgcg gcaacatact tttgtggaaa atttttagta 1080 ccttcagagg ggaaagtggt agttatgccg gaccccttca agatctttgt taagtttgga 1140 aaagagagac ctgctgatga taacgtagtc aaagaattgt ggcgatcttt cttcgacata 1200 accgagagtt atcagtctga agtaaatata caacgtctgc ttaaacagtt taccaagaaa 1260 tggggttaca gtcgacacgc atacgaaagt ttttgtgcga taaattcttt acgcagcaac 1320 ccagagcagt tcaagaggtt gtgggcgaca ttgtatgaaa cgaatcataa tagacgacag 1380 ttaagtcagt ctccatatga ttcgtgtgga taattttctt tgggcgatat atctattgac 1440 tttcatcacg atcagtgcga ttatagtagt attggttgtt ctgatacagc gtctcctctg 1500 tcccactagc cttcctccaa acgctcaagt gccacatgga ggtgggtatt gacttcggta 1560 ctacttattc tacgttgtgt ttctcccctg gtaaaggggt tgatggatgt gtattggaaa 1620 gtggtacgat atatatacct acggtcgtgg gttacagaac cgacggttct tttgccgttg 1680 gtttaggagc gttactcgag catgacatga cagtttaccg cgacattaaa cggtacttcg 1740 ggttaaacaa attcaataaa gatacctaca cttcaaaact caaatcggaa gtggaggtag 1800 ttgtcgatga ttggacgtgt aaaatcggtc ccgttgatgg atcaaaagga aaggcgcggt 1860 ctgttatagc tctagcctca gactttgtga caggtctttg tgctatagcc actaaaatga 1920 cgggacaacc agtaacactg tccgtgtgtt ctgtacctgc agcttataac tcctatttac 1980 gcagtttcat atacgagagt tgtaagctaa gttcgataaa tgtgcaagca gtggtaaacg 2040 aaccaactgc ggcaggtctt agcgctttta tagatattcc gaaatccaca gtgaactact 2100 tattagtgta cgatttcggt ggaggcacat ttgattgttc tttgttggtg gtaggtgctt 2160 catatgtatg cgtcttagac tcagcgggag ataattacct gggaggtaga gacgtcgata 2220 ataagttaag ggaagtttgt gccactaaac tcaaagttga tgttactcta ctcgactcct 2280 tttctatgga ggcacttaaa attgatttgg taaacaaacc aaacaaacgg gttagacaag 2340 ttcttctgaa atccggtgat gttagaacag tggatttcag tcaaaccgaa ttcaggaaac 2400 tgtgtgaac 2409 //