ID   EF457934; SV 1; linear; genomic DNA; STD; VRL; 1528 BP.
XX
AC   EF457934;
XX
DT   23-MAY-2007 (Rel. 91, Created)
DT   23-MAY-2007 (Rel. 91, Last updated, Version 1)
XX
DE   Tomato yellow leaf curl Thailand virus isolate YS1 replication-associated
DE   protein (C1) gene, partial cds; C4 protein (C4) and pre-coat protein (V2)
DE   genes, complete cds; and coat protein (V1) gene, partial cds.
XX
KW   .
XX
OS   Tomato yellow leaf curl Thailand virus
OC   Viruses; Geminiviridae; Begomovirus.
XX
RN   [1]
RP   1-1528
RA   Tsai W.S., Ito H., Kimbara J., Hosoi K., Shih S.L., Lee L.M., Green S.K.;
RT   "First report of Tomato yellow leaf curl Thailand virus in Taiwan";
RL   Unpublished.
XX
RN   [2]
RP   1-1528
RA   Tsai W.S., Ito H., Kimbara J., Hosoi K., Shih S.L., Lee L.M., Green S.K.;
RT   ;
RL   Submitted (26-FEB-2007) to the INSDC.
RL   Virology, AVRDC-The World Vegetable Center, PO Box 42, Shanhua, Tainan,
RL   Taiwan 74199, ROC
XX
DR   MD5; 5090611f3693b97f334ace2c6facd81d.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1528
FT                   /organism="Tomato yellow leaf curl Thailand virus"
FT                   /segment="DNA-A"
FT                   /host="tomato"
FT                   /isolate="YS1"
FT                   /mol_type="genomic DNA"
FT                   /country="Taiwan:Tainan"
FT                   /collection_date="2007"
FT                   /db_xref="taxon:85752"
FT   gene            complement(<1..702)
FT                   /gene="C1"
FT   CDS             complement(<1..702)
FT                   /codon_start=1
FT                   /gene="C1"
FT                   /product="replication-associated protein"
FT                   /db_xref="GOA:A5JHB4"
FT                   /db_xref="InterPro:IPR001191"
FT                   /db_xref="InterPro:IPR001301"
FT                   /db_xref="InterPro:IPR022690"
FT                   /db_xref="InterPro:IPR022692"
FT                   /db_xref="UniProtKB/TrEMBL:A5JHB4"
FT                   /protein_id="ABQ41343.1"
FT                   /translation="MAPPNKFRINAKNYFLTYPHCSLTKEEALSQIQALETPTNKLFIR
FT                   ICRELHEDGTPHLHVLIQFEGKFQCKNQRFFDLTSPTRSAHFHPNIQGAKSSTDVKTYI
FT                   EKDGDVLDHGIFQIDGRSARGGCQSANDAYAEAINSGSKASALTILREKAPKDFVLQFH
FT                   NLNSNLDRIFTPPMEEYISPFSSSSFNQVPEELKEWACNNVVSAAARPLRPIGIVIEGD
FT                   SRTGKTMWACRC"
FT   gene            complement(252..551)
FT                   /gene="C4"
FT   CDS             complement(252..551)
FT                   /codon_start=1
FT                   /gene="C4"
FT                   /product="C4 protein"
FT                   /db_xref="InterPro:IPR002488"
FT                   /db_xref="UniProtKB/TrEMBL:A5JHB5"
FT                   /protein_id="ABQ41344.1"
FT                   /translation="MKMGLLTCMSSSNSKENSNVKIKDSSISHPQPGQHISIRTFRELK
FT                   AQQMLKHTSKKTETCLIMEFSRSMEDRLEEVANLPTTHMPRQSIQGPKLRPSLY"
FT   gene            934..1320
FT                   /gene="V2"
FT   CDS             934..1320
FT                   /codon_start=1
FT                   /gene="V2"
FT                   /product="pre-coat protein"
FT                   /db_xref="GOA:A5JH98"
FT                   /db_xref="InterPro:IPR002511"
FT                   /db_xref="InterPro:IPR005159"
FT                   /db_xref="UniProtKB/TrEMBL:A5JH98"
FT                   /protein_id="ABQ41345.1"
FT                   /translation="MVPYLRLSHQVSAKFKMWDPLLNEFPENVHGFRCMLAVKYLQAVE
FT                   KTYSPDTLGFDLIRDLIGVIRAKNYVEASSRYSHFHARLESTSPSELRQPIQQPCCCPH
FT                   CPRHKRADMEEPTCIQKAQVLQNV"
FT   gene            1142..>1528
FT                   /gene="V1"
FT   CDS             1142..>1528
FT                   /codon_start=1
FT                   /gene="V1"
FT                   /product="coat protein"
FT                   /db_xref="GOA:A5JHB7"
FT                   /db_xref="InterPro:IPR000263"
FT                   /db_xref="InterPro:IPR000650"
FT                   /db_xref="UniProtKB/TrEMBL:A5JHB7"
FT                   /protein_id="ABQ41346.1"
FT                   /translation="MSKRPADILISTPVSKVRRRLNFDSPYNSRAAVPTVRVTKGQIWK
FT                   NRPAYRKPRFYRMYRSPDVPKGCEGPCKVQSFDAKNDIGHMGKVICLPDVTRGIGLTHR
FT                   VGKRFCVKSLYFVGKIWMDDNINCR"
XX
SQ   Sequence 1528 BP; 404 A; 318 C; 346 G; 460 T; 0 other;
     gcatctgcag gcccacatcg ttttacctgt tctgctatca ccctcaatta ctataccaat        60
     gggtctcaat ggccgcgcag cggcactgac aacattatta caagcccatt ctttaagttc       120
     ttctggaact tgattaaaag aagaagaaga aaatggagaa atatattcct ccattggagg       180
     agtaaaaatc ctatctaaat tagaatttaa attatgaaat tgcaaaacaa aatctttagg       240
     ggctttttcc ctcagtatag tgagggccga agctttggac cctgaattga ttgcctcggc       300
     atatgcgtcg ttggcagatt ggcaacctcc tctagccgat cttccatcga tctggaaaat       360
     tccatgatca agcacgtctc cgtctttttc gatgtatgtt ttaacatctg ttgagctttt       420
     agctccctga atgttcggat ggaaatgtgc tgacctggtt ggggatgtga gatcgaagaa       480
     tctttgattt ttacattgga attttccttc gaattggatg aggacatgca ggtgaggagt       540
     cccatcttca tggagttccc tgcagattct gatgaataat ttattagttg gtgtttctag       600
     tgcttgaatt tgggaaagtg cttcctcttt agtcagagaa caatgtgggt atgtcaggaa       660
     atagttcttg gcatttattc tgaatttatt aggaggagcc attgactggt caatcggtgt       720
     ctctcaaact tggctatgca atcggtgtct ggggtcttat ttatacctgg acaccaaatg       780
     gcataattgt aatttagtga atgtgattta aaattcaaaa tccaaaagcg gccatccgta       840
     taatattacc ggatggccgc gatttttttt gaagtggtcc ccttgatgtg atgtttcatc       900
     caattaaaac gctcggccaa agcttaatta tttatggtcc cctatttaag acttagtcac       960
     caagtttcgg cgaaattcaa aatgtgggat ccactcctaa acgaatttcc ggaaaacgtc      1020
     cacggtttcc gttgtatgtt agcggttaag tatctgcaag cggtcgagaa gacgtattca      1080
     cctgataccc tagggtttga tctcatccgt gatctcatcg gtgtaattcg tgcgaagaac      1140
     tatgtcgaag cgtccagcag atattctcat ttccacgccc gtctcgaaag tacgtcgccg      1200
     tctgaacttc gacagcccat acaacagccg tgctgctgtc cccactgtcc gcgtcacaaa      1260
     agggcagata tggaagaacc gacctgcata cagaaagccc aggttctaca gaatgtatag      1320
     aagtcctgat gtccctaagg gatgtgaggg tccatgtaaa gtgcaatctt tcgatgcgaa      1380
     gaacgacatt ggtcatatgg gcaaggtaat ctgtctgcct gacgttaccc gtggtattgg      1440
     gcttactcat cgagttggca agcgtttctg tgtcaagtca ctttattttg tcgggaagat      1500
     ctggatggac gataacatca actgcaga                                         1528
//