ID   EF457930; SV 1; linear; genomic DNA; STD; VRL; 1532 BP.
XX
AC   EF457930;
XX
DT   23-MAY-2007 (Rel. 91, Created)
DT   23-MAY-2007 (Rel. 91, Last updated, Version 1)
XX
DE   Tomato yellow leaf curl Thailand virus isolate 5-1 replication-associated
DE   protein (C1) gene, partial cds; nonfunctional C4 protein (C4) gene,
DE   complete sequence; pre-coat protein (V2) gene, complete cds; and coat
DE   protein (V1) gene, partial cds.
XX
KW   .
XX
OS   Tomato yellow leaf curl Thailand virus
OC   Viruses; Geminiviridae; Begomovirus.
XX
RN   [1]
RP   1-1532
RA   Tsai W.S., Ito H., Kimbara J., Hosoi K., Shih S.L., Lee L.M., Green S.K.;
RT   "First report of Tomato yellow leaf curl Thailand virus in Taiwan";
RL   Unpublished.
XX
RN   [2]
RP   1-1532
RA   Tsai W.S., Ito H., Kimbara J., Hosoi K., Shih S.L., Lee L.M., Green S.K.;
RT   ;
RL   Submitted (26-FEB-2007) to the INSDC.
RL   Virology, AVRDC-The World Vegetable Center, PO Box 42, Shanhua, Tainan,
RL   Taiwan 74199, ROC
XX
DR   MD5; aca18c2d7eaa1b5fe898c7f0aecf7e1f.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1532
FT                   /organism="Tomato yellow leaf curl Thailand virus"
FT                   /segment="DNA-A"
FT                   /host="tomato"
FT                   /isolate="5-1"
FT                   /mol_type="genomic DNA"
FT                   /country="Taiwan:Tainan"
FT                   /collection_date="2007"
FT                   /db_xref="taxon:85752"
FT   gene            complement(<1..702)
FT                   /gene="C1"
FT   CDS             complement(<1..702)
FT                   /codon_start=1
FT                   /gene="C1"
FT                   /product="replication-associated protein"
FT                   /db_xref="GOA:A5JHA0"
FT                   /db_xref="InterPro:IPR001191"
FT                   /db_xref="InterPro:IPR001301"
FT                   /db_xref="InterPro:IPR022690"
FT                   /db_xref="InterPro:IPR022692"
FT                   /db_xref="UniProtKB/TrEMBL:A5JHA0"
FT                   /protein_id="ABQ41329.1"
FT                   /translation="MAPPNKFRINAKNYFLTYPHCSLTKEEALSQIQALETPTNKLFIR
FT                   ICRELHEDGTPHLHVLIQFEGKFQCKNQRFFDLTSPTRSAHFHPNIQGAKSSTDVKTYM
FT                   EKDGDVIDHGIFQIDGRSARGGCQSANDAYAEAINSGSKASALTILREKAPKDFVLQFH
FT                   NLNSNLDRIFTPPMEEYISPFSSSSFNQVPEELKEWACNNVLSAAARPLRPIGIVIEGD
FT                   SRTGKTMWACRC"
FT   gene            complement(252..551)
FT                   /gene="C4"
FT   misc_feature    complement(252..551)
FT                   /gene="C4"
FT                   /note="nonfunctional C4 protein due to mutation"
FT   gene            934..1320
FT                   /gene="V2"
FT   CDS             934..1320
FT                   /codon_start=1
FT                   /gene="V2"
FT                   /product="pre-coat protein"
FT                   /db_xref="GOA:A5JHA1"
FT                   /db_xref="InterPro:IPR002511"
FT                   /db_xref="InterPro:IPR005159"
FT                   /db_xref="UniProtKB/TrEMBL:A5JHA1"
FT                   /protein_id="ABQ41330.1"
FT                   /translation="MVPYLRLSHQVSAKFKMWDPLLNEFPENVHGFRCILAVKYLQAVE
FT                   KTYSPDTLGFDLIRDLIGVIRAKNYVEASSRYSHFHARLESTSPSELRQPIQQPCCCPH
FT                   CPRHKRADMEEPTCIQKAQVLQNV"
FT   gene            1142..>1532
FT                   /gene="V1"
FT   CDS             1142..>1532
FT                   /codon_start=1
FT                   /gene="V1"
FT                   /product="coat protein"
FT                   /db_xref="GOA:A5JHA2"
FT                   /db_xref="InterPro:IPR000263"
FT                   /db_xref="InterPro:IPR000650"
FT                   /db_xref="UniProtKB/TrEMBL:A5JHA2"
FT                   /protein_id="ABQ41331.1"
FT                   /translation="MSKRPADILISTPVSKVRRRLNFDSPYNSRAAVPTVRVTKGQIWK
FT                   NRPAYRKPRFYRMYRSPDVPKGCEGPCKVQSFDAKNDIGHMGKVICLSDVTRGIGLTHR
FT                   VGKRFCVKSLYFVGKIWMDDNINCRN"
XX
SQ   Sequence 1532 BP; 404 A; 318 C; 345 G; 465 T; 0 other;
     gcatctgcag gcccacatcg tttttcctgt tctgctatca ccctcaatta ctataccaat        60
     gggtctcaat ggccgcgcag cggcactgag aacattatta caagcccatt ctttaagttc       120
     ttctggaact tgattaaaag aagaagaaga aaatggagaa atatattcct ccattggagg       180
     agtaaaaatc ctatctaaat tagaatttaa attatgaaat tgcaaaacaa aatctttagg       240
     ggctttttcc ctcagtatag tgagggccga agctttggac cctgaattga ttgcctcggc       300
     atatgcgtcg ttggcagatt ggcaacctcc tctagccgat cttccatcga tctggaaaat       360
     tccatgatca atcacgtctc cgtctttttc catgtatgtt ttaacatctg ttgagctttt       420
     agctccctga atgttcggat ggaaatgtgc tgacctggtt ggggatgtga gatcgaagaa       480
     tctttgattt ttacattgga attttccttc gaattggatg aggacatgca ggtgaggagt       540
     cccatcttca tggagttccc tgcagattct gatgaataat ttattagttg gtgtttctag       600
     tgcttgaatt tgggaaagtg cttcctcttt agtgagagaa caatgtgggt atgtcaggaa       660
     atagttcttg gcatttattc tgaatttatt aggaggagcc attgactggt caatcggtgt       720
     ctctcaaact tggctatgca atcggtgtct ggggtcttat ttatacctgg acaccaaatg       780
     gcataattgt aatttagtga atgtgattta caattcaaaa tccaaaagcg gccatccgta       840
     taatattacc ggatggccgc gatttttttt gaagtggtcc cctcgatgtg atgtttcatc       900
     caattaaaac gctcggccaa agcttaatta tttatggtcc cctatttaag acttagtcac       960
     caagtttcgg cgaaattcaa aatgtgggat ccactcctaa acgaatttcc ggaaaacgtc      1020
     cacggtttcc gttgtatttt agcggttaag tatctgcaag cggtcgagaa gacgtattca      1080
     cctgataccc tagggtttga tctcatccgt gatctcatcg gtgtaattcg tgcgaagaac      1140
     tatgtcgaag cgtccagcag atattctcat ttccacgccc gtctcgaaag tacgtcgccg      1200
     tctgaacttc gacagcccat acaacagccg tgctgctgtc cccactgtcc gcgtcacaaa      1260
     agggcagata tggaagaacc gacctgcata cagaaagccc aggttctaca gaatgtatag      1320
     aagtcctgat gtccctaagg gatgtgaggg tccatgtaaa gtgcaatctt tcgatgcgaa      1380
     gaacgacatt ggtcatatgg gcaaggtaat ctgtctgtct gacgttaccc gtggtattgg      1440
     gcttactcat cgagttggca agcgtttctg tgtcaagtca ctttattttg tcgggaagat      1500
     ctggatggac gataatatca actgcagaaa tc                                    1532
//