ID EF456746; SV 2; circular; genomic DNA; STD; VRL; 2814 BP. XX AC EF456746; XX DT 02-JUL-2008 (Rel. 96, Created) DT 18-JUN-2009 (Rel. 101, Last updated, Version 3) XX DE Sweet potato leaf curl Lanzarote virus isolate ES:CI:BG27:02, complete DE genome. XX KW . XX OS Sweet potato leaf curl Lanzarote virus OC Viruses; Geminiviridae; Begomovirus; unclassified Begomovirus. XX RN [1] RC Publication Status: Available-Online prior to print RP 1-2814 RX DOI; 10.1099/vir.0.012542-0. RX PUBMED; 19515824. RA Lozano G., Trenado H.P., Valverde R.A., Navas-Castillo J.; RT "Novel begomovirus species of recombinant nature in sweet potato (Ipomoea RT batatas) and Ipomoea indica: taxonomic and phylogenetic implications"; RL J. Gen. Virol. 90(Pt 10):2550-2562(2009). XX RN [2] RP 1-2814 RA Lozano G., Navas-Castillo J.; RT ; RL Submitted (26-FEB-2007) to the INSDC. RL Fruticultura Subtropical y Fitopatologia, Estacion Experimental La Mayora, RL Consejo Superior de Investigaciones Cientificas, Algarrobo-Costa 29750, RL Spain XX RN [3] RC Sequence update by submitter RP 1-2814 RA Lozano G., Navas-Castillo J.; RT ; RL Submitted (16-JUN-2009) to the INSDC. RL Fruticultura Subtropical y Fitopatologia, Estacion Experimental La Mayora, RL Consejo Superior de Investigaciones Cientificas, Algarrobo-Costa 29750, RL Spain XX DR MD5; 03dadf539b1b3a01609f07523ccd394d. XX CC On Jun 17, 2009 this sequence version replaced gi:154543280. XX FH Key Location/Qualifiers FH FT source 1..2814 FT /organism="Sweet potato leaf curl Lanzarote virus" FT /host="Ipomoea batatas" FT /isolate="ES:CI:BG27:02" FT /mol_type="genomic DNA" FT /country="Spain" FT /db_xref="taxon:574890" FT gene 43..441 FT /gene="V2" FT CDS 43..441 FT /codon_start=1 FT /gene="V2" FT /product="V2" FT /db_xref="GOA:I6LI51" FT /db_xref="InterPro:IPR002511" FT /db_xref="UniProtKB/TrEMBL:I6LI51" FT /protein_id="ABS83279.1" FT /translation="MMTLLYKDQSGCRAWRPSMAEMWDPLQNPLPDTLYGFRCMLSVKY FT LQGILKKYEPGTLGFELCTELIRIFRIRQYDRANTRFAEISSLWGETGKTEAELRDSYR FT ALHWECCPNCCPKLCPGFKRRPDEEKEG" FT gene 266..1030 FT /gene="V1" FT CDS 266..1030 FT /codon_start=1 FT /gene="V1" FT /product="CP" FT /note="capsid protein" FT /db_xref="GOA:I6LI52" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:I6LI52" FT /protein_id="ABS83280.2" FT /translation="MTGRIRVSPRFHPYGGRQVRRRLNFETAIVPYTGNAVPIAARSYV FT PVSRGVRMKRRRGDRIPKGCVGPCKVQDYEFKMDVPHTGTFVCVSDFIRGTGLTHRLGK FT RVCIKSMGIDGKVWMDDNVAKRDHTNIITYWLIRDRRPNKDPLNFGQIFTMYDNEPTTA FT KIRMDLRDRMQVLKKFSVTVSGGPYSHKEQALIRKFFKGLYNHVTYNHKEEAKYENQLE FT NALMLYSASSHASNPVYQTLRCRAYFYDSHHN" FT gene complement(1046..1480) FT /gene="C3" FT CDS complement(1046..1480) FT /codon_start=1 FT /gene="C3" FT /product="REn" FT /note="replication enhancer protein" FT /db_xref="GOA:I6LI55" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:I6LI55" FT /protein_id="ABS83283.1" FT /translation="MDSRTGESLSHAQTMRALEFDTNPMSVGRTAPFHLRIMYVHENTQ FT GRTILKFQLRVNHRERRQLGFHKIFLQFRILTTRLTGAIHSWTGILERLKWRICNELAN FT LGLFSLINLVFVIRYLPRVCSWIDEIDTIDCNDDVKVLLY" FT gene complement(1197..1643) FT /gene="C2" FT CDS complement(1197..1643) FT /codon_start=1 FT /gene="C2" FT /product="TrAP" FT /note="transcriptional activator protein" FT /db_xref="GOA:I6LI54" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:I6LI54" FT /protein_id="ABS83282.1" FT /translation="MSNLPSGIKRKCPIQEPLHTEAKKAKRKVPEQRTRIVWKGCGCSA FT FITTTCKYQHGFTHRGITKSCSDYESTRIRHQPHVCGSDCTIPSENHVCPREHTGENHP FT QIPTESQPQGKEAAGIPQDLPPIQDLDDPSNWCYSQLDWYFGTP" FT gene complement(1552..2646) FT /gene="C1" FT CDS complement(1552..2646) FT /codon_start=1 FT /gene="C1" FT /product="Rep" FT /note="replication-associated protein" FT /db_xref="GOA:I6LI53" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:I6LI53" FT /protein_id="ABS83281.1" FT /translation="MPRAGRFNIKAKNYFLTYPQCSLTKEEVLDQLLHLNTPTNKKFIK FT ICRELHENGEPHLHVLLQFEGNYQCTNQRFFDLVSPSRSSHFHPNIQRAKSSSDVKSYV FT DKDGDTIEWGEFQVDGRSARGGQQTANDAAAEALNSGSKEAALQIIREKLPEKFIFQYH FT NLCGNLDRIFSPPPSVYSSPLSSSSFNAVPDIISDWAAENVMDSAARPDRPISIVIEGP FT SRIGKTVWARSLGPHNYLCGHLDLSPKVYSNSAWYNVIDDVNPQYLKHFKEFMGAQKDW FT QSNCKYGKPVQIKGGIPTIFLCNPGEGSSFKLWLDKPEQGALKNWATAYAIFCDVQSPF FT WNQEEVSHSGATAHRGEEGQEESS" FT gene complement(2232..2495) FT /gene="C4" FT CDS complement(2232..2495) FT /codon_start=1 FT /gene="C4" FT /product="C4" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:I6LI56" FT /protein_id="ABS83284.1" FT /translation="MKMGNLISTYCCSSKGTTNARIRDSSTLFPHQGHHTFTLISRELN FT PAPMSSPTSIRTVTQLNGVSSRSTADLLEEASRLLMTQQQRP" XX SQ Sequence 2814 BP; 741 A; 592 C; 677 G; 804 T; 0 other; accggtgccc gccgcgcccc cttttgtggg ccccacaagg aaatgatgac attgctttat 60 aaggaccaat caggttgccg tgcttggcgc ccaagtatgg ctgaaatgtg ggacccgctt 120 cagaacccac taccagatac tttatacggt ttcaggtgta tgctttccgt aaaataccta 180 caaggtattt tgaagaaata cgagccagga accctagggt tcgagctctg tacggagtta 240 atccgtatat tcaggatcag gcaatatgac agggcgaata cgcgtttcgc cgagatttca 300 tccctatggg gggagacagg taagacggag gctgaacttc gagacagcta tcgtgcctta 360 cactgggaat gctgtcccaa ttgctgcccg aagctatgtc ccggtttcaa gaggcgtccg 420 gatgaagaga aggaggggtg accgcatccc gaagggttgt gtgggtccct gtaaggtcca 480 ggactatgag ttcaagatgg acgttcccca cacgggaacg tttgtctgtg tctcggattt 540 tataaggggg actgggctta cccatcgcct gggtaagcgt gtttgtatta agtccatggg 600 tatagatggg aaggtatgga tggatgacaa tgtggccaag agagatcaca ccaatatcat 660 cacgtattgg ttgattcgtg atagaaggcc caataaggat ccgctgaact ttggccagat 720 cttcactatg tacgacaacg agcccactac tgctaagatc cgaatggatc tgagggatag 780 aatgcaagtc ttgaagaagt tctctgttac agtttcaggc ggtccataca gccacaagga 840 acaggcatta attaggaagt tttttaaggg tttgtataat catgttactt ataatcataa 900 ggaagaagct aagtatgaga atcagttaga gaatgctttg atgttgtata gtgctagcag 960 tcatgctagc aatcctgtgt atcagaccct gcgttgcagg gcttattttt atgattcgca 1020 ccataattaa taaactttta ttttattaat acagtaatac ctttacatca tcattgcaat 1080 ctatagtatc tatttcatct atccaagaac atactcttgg aagatatcta ataacaaaaa 1140 ctaaattaat caaactaaat aaccctaaat ttgctaattc gttacaaatg cgccacttaa 1200 ggcgttccaa aataccagtc caactgtgaa tagcaccagt tagacgggtc gtcaagatcc 1260 tgaattggag gaagatcttg tggaatccca gctgcctcct ttccctgtgg ttgactctca 1320 gttggaattt gaggatggtt ctcccctgtg tgttctcgtg gacatacatg attctcagat 1380 ggaatggtgc agtccgaccc acagacatgg ggttggtgtc gaattctagt gctctcatag 1440 tctgagcatg acttagtgat tcccctgtgc gtgaatccat gctgatactt gcaggttgtg 1500 gtgatgaagg ctgaacagcc gcaacccttc cacactattc tcgtcctctg ttcaggaact 1560 ttcctcttgg ccttcttcgc ctctgtgtgc agtggctcct gaatgggaca cttcctcttg 1620 attccagaag ggagattgga catcgcagaa tatagcgtat gctgttgccc aattcttgag 1680 tgctccttgc tctggtttgt ccaaccagag tttaaatgaa gagccctctc ctggattgca 1740 gaggaagata gtgggaattc cacctttaat ttgaactggc ttcccgtact tacagttgga 1800 ttgccagtcc ttctgggccc ccatgaattc cttaaagtgc tttaggtatt gggggttgac 1860 gtcatcaatg acgttatacc aagcactgtt gctgtatact tttgggctta aatctaaatg 1920 cccacataaa tagttatgtg ggcccaaaga cctggcccat actgttttgc cgattctgct 1980 tgggccttca ataactatgg atatgggtct atccggccgc gcagcggaat ccatgacatt 2040 ttcagcggcc cagtcgctta taatgtcagg aacggcattg aaagaagaag aagaaagagg 2100 ggaagaatac acagaaggag gaggagaaaa aatcctatct aaattaccac ataagttgtg 2160 gtattgaaaa ataaatttct cagggagttt ttccctgatg atttgtaagg cagcttcttt 2220 gctgcctgaa tttaaggcct ctgctgctgc gtcattagca gtctgctggc ctcctctagc 2280 agatctgccg tcgacctgga actcacccca ttcaattgtg tcaccgtcct tatcgacgta 2340 ggacttgaca tcggagctgg atttagctct ctggatatta gggtgaaagt gtgatgacct 2400 tgatggggaa acaaggtcga agaatctctg attcgtgcat tggtagttcc cttcgaactg 2460 caacagtacg tggagatgag gttccccatt ttcatgcagc tctctgcata tcttgatgaa 2520 ttttttattg gttggggtgt tgagatgaag aagctgatcg agaacttctt ctttggtaag 2580 agaacattgg ggatatgtaa gaaaatagtt tttggctttt atattaaaac gccctgctct 2640 cggcatgctg aaaagcaaat ggtggaacac aaactcctgt atgaattggt ggaacggtgg 2700 acaatttata tgtgtccacc aaatggcatt ttggtaattt agaagatcct tttaccttta 2760 attcaaattc cgacaactat gggtccacca aaaggcgggc accgtattaa tatt 2814 //