ID EF456743; SV 2; circular; genomic DNA; STD; VRL; 2779 BP. XX AC EF456743; XX DT 02-JUL-2008 (Rel. 96, Created) DT 18-JUN-2009 (Rel. 101, Last updated, Version 3) XX DE Sweet potato leaf curl Spain virus isolate ES:CI:BG5:02, complete genome. XX KW . XX OS Sweet potato leaf curl Spain virus OC Viruses; Geminiviridae; Begomovirus; unclassified Begomovirus. XX RN [1] RC Publication Status: Available-Online prior to print RP 1-2779 RX DOI; 10.1099/vir.0.012542-0. RX PUBMED; 19515824. RA Lozano G., Trenado H.P., Valverde R.A., Navas-Castillo J.; RT "Novel begomovirus species of recombinant nature in sweet potato (Ipomoea RT batatas) and Ipomoea indica: taxonomic and phylogenetic implications"; RL J. Gen. Virol. 90(Pt 10):2550-2562(2009). XX RN [2] RP 1-2779 RA Lozano G., Navas-Castillo J.; RT ; RL Submitted (26-FEB-2007) to the INSDC. RL Fruticultura Subtropical y Fitopatologia, Estacion Experimental La Mayora, RL Consejo Superior de Investigaciones Cientificas, Algarrobo-Costa 29750, RL Spain XX RN [3] RC Sequence update by submitter RP 1-2779 RA Lozano G., Navas-Castillo J.; RT ; RL Submitted (16-JUN-2009) to the INSDC. RL Fruticultura Subtropical y Fitopatologia, Estacion Experimental La Mayora, RL Consejo Superior de Investigaciones Cientificas, Algarrobo-Costa 29750, RL Spain XX DR MD5; 8fd08c704bcd80ec329b27e9f12d523d. XX CC On Jun 17, 2009 this sequence version replaced gi:154543260. XX FH Key Location/Qualifiers FH FT source 1..2779 FT /organism="Sweet potato leaf curl Spain virus" FT /host="Ipomoea batatas" FT /isolate="ES:CI:BG5:02" FT /mol_type="genomic DNA" FT /country="Spain" FT /db_xref="taxon:652717" FT gene 89..430 FT /gene="V2" FT CDS 89..430 FT /codon_start=1 FT /gene="V2" FT /product="V2" FT /note="pre-coat" FT /db_xref="GOA:I6LI35" FT /db_xref="InterPro:IPR002511" FT /db_xref="UniProtKB/TrEMBL:I6LI35" FT /protein_id="ABS83262.1" FT /translation="MDLWDPLQNPLPETLYGLRCMLSVKYLQSISEKYEPGTLGFELCS FT EIIRILRVRHYDRANARYAEISSVWGDSGKTEAELRDSYRALHWECCPNCCPKLCPDFK FT KRPDEEKEG" FT gene 255..1019 FT /gene="V1" FT CDS 255..1019 FT /codon_start=1 FT /gene="V1" FT /product="CP" FT /note="capsid protein" FT /db_xref="GOA:I6LI36" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:I6LI36" FT /protein_id="ABS83263.1" FT /translation="MTGRMRVTRRFHPYGGTPARRRLNFETAIVPYTGNAVPIAARSYV FT PISRSAQMKRRKGDRIPKGCVGPCKVQDYEFKMDVPHSGTFVCVSDFTRGTGLTHRLGK FT RVCIKSMGIDGKVWMDDNVAKRDHTNIITYWLIRDRRPNKDPLTFSQAFTMYDNEPTTA FT KIRMDLRDRMQVLKKFAVTVSGGPYNHKEQALVRKFFNSLYNHVTYNHKEEAKYENHLE FT NALMLYSASSHASNPVYQTLRCRAYFYDSHKN" FT gene complement(1016..1453) FT /gene="C3" FT CDS complement(1016..1453) FT /codon_start=1 FT /gene="C3" FT /product="REn" FT /note="replication enhancer protein" FT /db_xref="GOA:I6LI39" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:I6LI39" FT /protein_id="ABS83266.1" FT /translation="MDSRTGESLSHAQITRAAEFFNNPMSVGQTAPFHLRLMYVHTNNL FT DSKTIMKVQLQVNHRNRREIGFQKLFLQFRIITTRLIGAIPNWTGISNRLKWRICNSLA FT SLGYFSLLNLVYVIRNLPQQCLWVEEVDVIDCKDDIKVLLY" FT gene complement(1167..1616) FT /gene="C2" FT CDS complement(1167..1616) FT /codon_start=1 FT /gene="C2" FT /product="TrAP" FT /note="transcriptional activator protein" FT /db_xref="UniProtKB/TrEMBL:I6LI38" FT /protein_id="ABS83265.1" FT /translation="MSTAPSGYKRKCPTQEPIHAAAKKSQRKTPEPRTRIVWKGCGCSA FT FITNACKFQHGFTHRGVTKSCTDYESSRILQQSHVCGSDCTIPSTTNVCPYEQPRLKDD FT HESAASSQPPEQEGNWIPETIPPIPDHNNASDWCYSQLDWYFQSP" FT gene complement(1525..2619) FT /gene="C1" FT CDS complement(1525..2619) FT /codon_start=1 FT /gene="C1" FT /product="Rep" FT /note="replication-associated protein" FT /db_xref="GOA:I6LI37" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:I6LI37" FT /protein_id="ABS83264.1" FT /translation="MPRAGRFNINAKNYFLTYPQCSISKEEALAQIQNIPTAVNKKFIK FT ICRELHEDGQPHLHVLLQFEGKFQCTNQRLFDLVSQTRSAHFHPNIQRAKSSSDVKSYV FT DKDGDTLEWGEFQVDGRSARGGQQTANDAAAEALNAGSKDAALQIIREKLPEKFIFQYH FT NLVSNLDRIFSPPPSVYSSPFSISSFNNVPDIISDWAAENVMDAAARPERPISIVIEGP FT SRIGKTVWARSLGPHNYLCGHLDLSPKAYSNSAWYNVIDDVNPQYLKHFKEFMGAQKDW FT QSNCKYGKPVQIKGGIPTIFLCNPGEGSSFKLWLDKPEQEALKNWAVKNAVFCDVDSPF FT WIQEEVSHSGTNTRGGQEEPEENS" FT gene complement(2205..2462) FT /gene="C4" FT CDS complement(2205..2462) FT /codon_start=1 FT /gene="C4" FT /product="C4" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:C5H8H0" FT /protein_id="ABS83267.1" FT /translation="MGNLISTCFCNSKGNSSARTNAYSTWSLKPGQHISILTFKELNPA FT PTSSPTSIRMETHWNGENSRSTADLLEEASRLLTTQQQKH" XX SQ Sequence 2779 BP; 711 A; 570 C; 655 G; 843 T; 0 other; accggtgccc gcgcccgttt ttttgtgggc cccactggtt tgctttaatc atttaaagcg 60 cgtcattgac gagcctttgt ctccaagtat ggatttgtgg gatcctttgc agaacccatt 120 accagagact ttatacggtt tacggtgtat gctttctgtc aaatacttgc agagtatttc 180 tgagaaatac gagccaggaa ccctagggtt cgagctgtgc tccgagataa ttcgcatcct 240 gcgggttcgt cattatgaca gggcgaatgc gcgttacgcg gagatttcat ccgtatgggg 300 ggactccggc aagacggagg ctgaacttcg agacagctat cgtgccttac actgggaatg 360 ctgtcccaat tgctgcccga agctatgtcc cgatttcaag aagcgcccag atgaagagaa 420 ggaagggtga tcgcattccg aagggatgcg tgggtccttg taaggtacag gattacgaat 480 tcaagatgga tgtcccacat agtgggacct ttgtttgtgt ttctgatttt actagaggta 540 ctgggcttac ccatcgtttg ggtaagaggg tgtgtattaa gtccatgggt attgatggta 600 aggtttggat ggatgacaac gtcgccaaga gggaccacac caacatcatt acttactggt 660 tgatccgaga taggaggccc aataaggatc ctttgacgtt ttcacaggcg tttacaatgt 720 atgataacga gcccactact gctaagatcc gaatggatct gagagataga atgcaggtgt 780 tgaagaaatt tgctgttact gtttccggtg gtccgtataa ccacaaagag caggctttgg 840 ttcggaagtt ttttaatagt ttgtataatc atgttactta taatcataag gaagaagcta 900 agtatgagaa tcatttagag aatgcattaa tgttgtattc tgctagcagt catgctagca 960 atcctgtgta tcagaccctg cgttgcaggg catattttta tgattcgcac aaaaattaat 1020 aaagaagtac ttttatatca tctttgcaat ctattacatc gacttcttct acccacaagc 1080 attgttgtgg taaatttcta attacataaa ctaaatttaa caatgaaaaa taacctaaac 1140 tagctaaact attacaaatt cgccatttaa ggcgattgga aataccagtc caattgggaa 1200 tagcaccaat cagacgcgtt gttatgatcc ggaattggag gaatagtttc tggaatccaa 1260 tttccctcct gttccggtgg ttgacttgaa gctgcacttt catgatcgtc tttgagtcta 1320 ggttgttcgt atggacatac attagtcgta gatggaatgg tgcagtctga cccacagaca 1380 tgggattgtt gaagaattct gctgctctcg taatctgtgc atgacttagt gactccccgg 1440 tgcgtgaatc catgctggaa cttgcaggcg ttggtgatga aggctgaaca accgcagccc 1500 ttccacacga tccttgtcct tggctcagga gttttcctct ggctcttctt ggccgccgcg 1560 tgtattggtt cctgagtggg acacttcctc ttgtatccag aaggggctgt cgacatcaca 1620 aaaaactgcg ttttttacag cccagttctt gagtgcttct tgctctggct tgtccagcca 1680 gagtttaaat gaagagcctt ctcctggatt gcagaggaag atagtgggta ttccaccttt 1740 aatttgaact ggctttccgt atttacaatt gctttgccag tccttctggg cccccatgaa 1800 ctctttaaag tgctttaggt attgggggtt gacgtcatca atgacgttat accaagcact 1860 gttgctatac gcctttggac tcaggtccaa atgcccacac agataattat gtgggcctaa 1920 ggatctagcc caaactgttt tacctattct acttgggcct tctataacta tacttatggg 1980 cctctctggc cgcgcagcgg catccatgac attctcagca gcccaatcac tgataatgtc 2040 aggaacatta ttgaaagaag aaatggaaaa aggtgaagaa taaacagaag gaggaggaga 2100 aaatatccta tctaaattgc taactaaatt atgatattga aatataaatt tttcagggag 2160 tttctccctg attatttgta aagcagcgtc cttacttcct gcatttaatg cttctgctgc 2220 tgcgtcgtta gcagtctgct ggcctcctct agcagatctg ccgtcgacct ggaattctcc 2280 ccattccaat gtgtctccat ccttatcgac gtaggacttg acgtcggagc tggatttagc 2340 tctttgaatg ttaggatgga aatgtgctga cctggtttga gagaccaggt cgaataggcg 2400 ttggttcgtg cactggaatt tcccttcgaa ttgcagaagc acgtggagat gaggttgccc 2460 atcctcgtgt agttccctgc agattttaat gaatttttta tttactgcag ttgggatatt 2520 ttggatttgg gctaatgctt cttctttgga gatagagcat tggggatatg taagaaaata 2580 atttttggca tttatattga acctcccggc tctcggcatt ttaaagagca atgggtggac 2640 acacaaactc catatgaatt ggtggaaggg tggacaattt atatgtgtcc acctaatggc 2700 attttggtaa ttagaacacc tttaatttga attcagcaat cctattggtc cgccataaag 2760 cgggcaccgt attaatatt 2779 //