ID EF445397; SV 1; linear; genomic RNA; STD; VRL; 2484 BP. XX AC EF445397; XX DT 21-MAR-2007 (Rel. 91, Created) DT 16-DEC-2008 (Rel. 98, Last updated, Version 2) XX DE Poligonum ringspot tospovirus non-structural protein (NS) and nucleocapsid DE protein (N) genes, complete cds. XX KW . XX OS Orthotospovirus polygonianuli OC Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; OC Ellioviricetes; Bunyavirales; Tospoviridae; Orthotospovirus. XX RN [1] RP 1-2484 RX DOI; 10.1007/s00705-008-0228-1. RX PUBMED; 18953484. RA Ciuffo M., Tavella L., Pacifico D., Masenga V., Turina M.; RT "A member of a new Tospovirus species isolated in Italy from wild buckwheat RT (Polygonum convolvulus)"; RL Arch. Virol. 153(11):2059-2068(2008). XX RN [2] RP 1-2484 RA Ciuffo M., Turina M., Pacifico D.; RT ; RL Submitted (19-FEB-2007) to the INSDC. RL IVV, CNR, Strada Delle Cacce 73, Torino, To 10135, Italy XX DR MD5; 0adb3da7a02e66988372ccc0dceb0e4b. DR EuropePMC; PMC3371012; 22715400. DR EuropePMC; PMC4263035; 25465801. DR EuropePMC; PMC4326804; 25540203. DR EuropePMC; PMC4439075; 25993336. XX FH Key Location/Qualifiers FH FT source 1..2484 FT /organism="Orthotospovirus polygonianuli" FT /host="Poligonum convolvolus" FT /isolate="Plg3" FT /mol_type="genomic RNA" FT /country="Italy" FT /db_xref="taxon:3052582" FT gene 73..1404 FT /gene="NS" FT /note="NSs" FT CDS 73..1404 FT /codon_start=1 FT /gene="NS" FT /product="non-structural protein" FT /note="putative silencing suppressor" FT /db_xref="InterPro:IPR004915" FT /db_xref="UniProtKB/TrEMBL:A4GW60" FT /protein_id="ABO31116.1" FT /translation="MSTVKTTAVDFFLNYGISSDSRSSNDCYRIFSGIGDPIMDIFMHS FT TIGIKPAFSISGLGKNEDIKAHEAEVIEEHHNYDVFNRFGLDINFCNHFLEITVKKPSV FT KNYETKFQMHNQIFQPSRRLINHGMGKISENDFFALTDIAKEDIYPRDWFINEAERKTF FT FMADIAGFSLDYGFSVMGKTTSYWRENLEKTSLISIKQKSAGNPVVPTNRLLSAGTIKA FT VEIASAIASDKTTILAVKQDLDADLRTQFRISLPGEYNEAGLARTFLINQGSKGQYICI FT YARTSLDRPNERTTLIIKVVTQKRPGDYDMMMLPRDHANCRKLVGASFGTVERKLTDPN FT YNKIIAHEMLAVHTSFALKISKILSKPVIVYKVYEKELSPKAVEVDGRTFNYNEDVDGN FT VYFLSKTLEMLPISLSVLVYLDSAAPPCWKEHRGLGHFTVEEVQ" FT gene complement(1588..2412) FT /gene="N" FT CDS complement(1588..2412) FT /codon_start=1 FT /gene="N" FT /product="nucleocapsid protein" FT /db_xref="GOA:A4GW61" FT /db_xref="InterPro:IPR002517" FT /db_xref="UniProtKB/TrEMBL:A4GW61" FT /protein_id="ABO31117.1" FT /translation="MSTTGLSKENVEKLLAGGDADVEIEAEETAGFNFKQFVTDNSKMK FT MTFNNGFTILRNRAAIYKMVKAGHFKFQGKSIVVPSSTSSPGQDDWTFRRLEGFIRAKM FT FMELINMENAVEQQKMYEKLCELPMVNAYGLKPSSKFDPTTARVVLTLGGPLPLMASLD FT KFAAAAFPLAYFQNVKKEALGINKFSTYEQLCKIARVMATKEFTFTGASKAIFEETIKI FT LNDCTPGTAGAASLNKFNEQIKALEAVFGKIVDDNNAGSSKPRPASKKNQGF" XX SQ Sequence 2484 BP; 725 A; 528 C; 535 G; 696 T; 0 other; agagcaatcg aggtataaac aaataaaatc aaaacagctt gaacacagtg agcaagaaat 60 actatctcag ccatgtctac cgtcaagaca acagcagttg actttttcct caactacggc 120 atctccagtg attctcgctc gagtaatgac tgctacagga tattctcagg cataggagat 180 cccatcatgg acatcttcat gcattcaacc ataggcatta aacctgcctt cagcattagt 240 ggcctcggca agaacgagga cattaaagct catgaagctg aagtcattga agagcatcac 300 aattatgacg tcttcaacag atttggtctg gacataaatt tctgcaacca ttttctggag 360 attactgtca agaaaccatc tgtcaaaaat tatgaaacaa agtttcaaat gcacaatcag 420 atatttcagc cttcacggcg actgatcaac catggcatgg gtaaaatatc tgagaatgat 480 ttttttgccc tcacagacat tgctaaagaa gacatctacc cacgtgactg gttcataaat 540 gaagcagaaa ggaagacttt ctttatggct gacattgctg gtttcagcct ggactatggt 600 ttttctgtga tgggcaagac cacatcttat tggagggaga atctggagaa aacatccttg 660 atttctataa agcagaaatc tgcaggcaat cctgtggtgc ctacaaacag gcttttgtct 720 gctggcacta taaaggcagt agagatagct tctgctattg caagcgataa gacaaccatc 780 cttgcagtca agcaggattt ggatgctgat ctgagaactc agttcaggat ctctctgcct 840 ggggagtaca atgaagctgg ccttgccaga acatttttga tcaaccaagg atcaaagggg 900 cagtacatat gtatctatgc caggactagc ctggatagac ccaatgaaag gaccacacta 960 atcattaaag ttgtgaccca gaaaaggcca ggtgattatg acatgatgat gctcccaaga 1020 gatcatgcca actgcaggaa attggttgga gctagcttcg gcactgttga gcggaaattg 1080 acagatccca actacaacaa gatcattgct catgagatgc tggctgtgca caccagcttt 1140 gctctgaaga tatcaaagat cttgagcaag cctgtaattg tgtacaaggt ttatgagaaa 1200 gagctttcac ccaaagcagt ggaggtggat ggaagaacat tcaactacaa tgaggatgtt 1260 gatggaaatg tttattttct gtcgaaaact ttggagatgc tgcccatatc tctttcagtt 1320 cttgtgtatc tggattcagc tgctccacct tgctggaagg agcacagagg actcggccac 1380 ttcactgtgg aggaagtcca gtgattgtgt ctacaacttg ctgctgcaag tttgtgtgag 1440 tgttagtgct gtgctgcagt tatgttaagt taagttattt tagtaattac ttaaggtatt 1500 gttaaataaa ataaataaaa acaaataaaa actaataaaa taaaaacaca aaaaaagata 1560 aagttaaagc aagcattaag aaatcattca aaatccttga ttctttttgg aggcaggcct 1620 tggtttagaa gacccggcat tattgtcatc aacaatcttg ccgaagacgg cttcaagagc 1680 cttgatctgc tcattgaact tgttcaatga agcagcacca gcagttccag gagtgcagtc 1740 attgaggatc tttatggtct cctcaaagat ggcctttgaa gccccagtga aggtaaactc 1800 ctttgttgcc ataactctgg cgatcttgca cagctgttca taagttgaaa acttatttat 1860 gcctaaagcc tccttcttaa cattctggaa gtaggccaat ggaaatgcag ctgcagcaaa 1920 cttatccagg cttgccatca gaggaagtgg accacccaat gtcagcacca ctcttgcggt 1980 ggttgggtca aattttgagc tgggcttcaa gccgtatgca ttcaccatgg gaagctcaca 2040 gagcttttca tacattttct gctgctctac tgcattctcc atgttgatca gctccataaa 2100 catctttgcc ctgatgaagc cttccagcct tctgaaagtc cagtcatcct ggccaggact 2160 tgaagtggag ctagggacca caatagactt tccctggaat ttgaagtgtc ctgctttcac 2220 cattttgtag atggcagctc tgtttctcaa aattgtgaaa ccattgttga aggtcatctt 2280 catcttgctg ttgtctgtga caaactgctt gaagttgaat ccagcagttt cctcagcctc 2340 aatttccaca tctgcatccc cacctgcgag gagcttctca acgttttcct tgctcaaccc 2400 tgtggtagac atggtgtata cttaggaagc agcttactga gtggaagttg ttttagtttg 2460 aatttgttat acctcgattg ctct 2484 //