ID   EF423702; SV 1; linear; genomic DNA; STD; VRL; 837 BP.
XX
AC   EF423702;
XX
DT   23-JUL-2007 (Rel. 92, Created)
DT   23-JUL-2007 (Rel. 92, Last updated, Version 1)
XX
DE   Tomato yellow leaf curl virus isolate recombinant Ty-1S-C.10 400dpi type IX
DE   REn and TrAP genes, complete cds; and nonfunctional Rep gene, partial
DE   sequence.
XX
KW   .
XX
OS   Tomato yellow leaf curl virus
OC   Viruses; Geminiviridae; Begomovirus.
XX
RN   [1]
RP   1-837
RX   DOI; 10.1016/j.virol.2007.03.045.
RX   PUBMED; 17467025.
RA   Garcia-Andres S., Tomas D.M., Sanchez-Campos S., Navas-Castillo J.,
RA   Moriones E.;
RT   "Frequent occurrence of recombinants in mixed infections of tomato yellow
RT   leaf curl disease-associated begomoviruses";
RL   Virology 365(1):210-219(2007).
XX
RN   [2]
RP   1-837
RA   Garcia-Andres S., Tomas D.M., Sanchez-Campos S., Navas-Castillo J.,
RA   Moriones E.;
RT   ;
RL   Submitted (02-FEB-2007) to the INSDC.
RL   Fruticultura Subtropical y Fitopatologia, Estacion Experimental La Mayora,
RL   CSIC, Algarrobo-Costa, Malaga 29750, Spain
XX
DR   MD5; 0ba098c77e04ce9c5b8c9b896a9bffcc.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..837
FT                   /organism="Tomato yellow leaf curl virus"
FT                   /isolate="recombinant Ty-1S-C.10 400dpi type IX"
FT                   /mol_type="genomic DNA"
FT                   /country="Spain:Malaga"
FT                   /note="TYLCSV/TYLCV recombinant"
FT                   /db_xref="taxon:10832"
FT   CDS             complement(61..465)
FT                   /codon_start=1
FT                   /product="REn"
FT                   /db_xref="GOA:A7KI58"
FT                   /db_xref="InterPro:IPR000657"
FT                   /db_xref="UniProtKB/TrEMBL:A7KI58"
FT                   /protein_id="ABS29964.1"
FT                   /translation="MDSRTGEYITAHQATSGVYTFEITNPLYFTITRHNQQPFNSKYNF
FT                   LTFQIRFNHNLRKALGIHKCFLNFRIWTTLQSPTGHFLRVFRYQVYKYLNNIGVISLNN
FT                   VIRAVDYVLFDVFENTIDVIEQHEIKYNLY"
FT   CDS             complement(206..613)
FT                   /codon_start=1
FT                   /product="TrAP"
FT                   /db_xref="GOA:A7KI59"
FT                   /db_xref="InterPro:IPR000942"
FT                   /db_xref="UniProtKB/TrEMBL:A7KI59"
FT                   /protein_id="ABS29963.1"
FT                   /translation="MQPSSPSTSHCSQVSIKVQHKIAKKKPIRRKRIDLDCGCSYYQHL
FT                   NCNNHGFTHRGVHHCASSNEWRLYLRDNKSPIFHDNQTQPTTIQQQIQFPNISNQVQPQ
FT                   LEEGTGDSQMFSQLPHLDDLTVSDWSFFKSL"
FT   misc_feature    complement(522..>837)
FT                   /note="nonfunctional Rep due to mutation"
XX
SQ   Sequence 837 BP; 213 A; 147 C; 184 G; 293 T; 0 other;
     ttctaaccca gtgtatgcta cgttgaaaat acgtatctat ttttatgatg ctgtaacaaa        60
     ttaataaaga ttgtatttta tttcatgttg ttcaattaca tctattgtgt tctcaaatac       120
     atcgaataag acataatcaa ctgctctaat aacattgttt aatgaaatta cacctatatt       180
     attcaaatac ttatacactt gatacctaaa gactcttaaa aaatgaccag tcggagactg       240
     taaggtcgtc cagatgcgga agttgagaaa acatttgtga atccccagtg ccttcctcaa       300
     gttgtggttg aacctgattt gaaatgttag gaaattgtat ttgctgttga atggttgttg       360
     gttgtgtctg gttatcgtga aatatagggg atttgttatc tcgaaggtat aaacgccact       420
     cgttgcttga tgcgcagtga tgtactcccc tgtgcgtgaa tccatgattg ttgcagttga       480
     ggtgttggta gtatgagcag ccacagtcta ggtctatacg cttacgcctt attggtttct       540
     tcttggctat cttgtgttgg accttgattg atacttgcga acagtggctc gtagagggtg       600
     acgaaggttg cattcttgag agcccaattt ttcaaggata tgtttttttc ttcgtctaga       660
     tattccctat atgaggaggt aggtcctgga ttgcagagga agatagtggg aattccccct       720
     ttaatttgat gggcttcccg tactttgtgt tgctttgcca gtccctctgg gcccccatga       780
     attctttgaa gtgctttaaa taatgcgggt ctacgtcatc aatgacgttg taccatg          837
//