ID   EF423674; SV 1; linear; genomic DNA; STD; VRL; 835 BP.
XX
AC   EF423674;
XX
DT   23-JUL-2007 (Rel. 92, Created)
DT   23-JUL-2007 (Rel. 92, Last updated, Version 1)
XX
DE   Tomato yellow leaf curl virus isolate recombinant Ty-1S-C.117 400dpi type
DE   VI REn and TrAP genes, complete cds; and nonfunctional Rep gene, partial
DE   sequence.
XX
KW   .
XX
OS   Tomato yellow leaf curl virus
OC   Viruses; Geminiviridae; Begomovirus.
XX
RN   [1]
RP   1-835
RX   DOI; 10.1016/j.virol.2007.03.045.
RX   PUBMED; 17467025.
RA   Garcia-Andres S., Tomas D.M., Sanchez-Campos S., Navas-Castillo J.,
RA   Moriones E.;
RT   "Frequent occurrence of recombinants in mixed infections of tomato yellow
RT   leaf curl disease-associated begomoviruses";
RL   Virology 365(1):210-219(2007).
XX
RN   [2]
RP   1-835
RA   Garcia-Andres S., Tomas D.M., Sanchez-Campos S., Navas-Castillo J.,
RA   Moriones E.;
RT   ;
RL   Submitted (02-FEB-2007) to the INSDC.
RL   Fruticultura Subtropical y Fitopatologia, Estacion Experimental La Mayora,
RL   CSIC, Algarrobo-Costa, Malaga 29750, Spain
XX
DR   MD5; 8b7ed4bc58ed0560b8e99d3991d03355.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..835
FT                   /organism="Tomato yellow leaf curl virus"
FT                   /isolate="recombinant Ty-1S-C.117 400dpi type VI"
FT                   /mol_type="genomic DNA"
FT                   /country="Spain:Malaga"
FT                   /note="TYLCSV/TYLCV recombinant"
FT                   /db_xref="taxon:10832"
FT   CDS             complement(61..465)
FT                   /codon_start=1
FT                   /product="REn"
FT                   /db_xref="GOA:A7KI46"
FT                   /db_xref="InterPro:IPR000657"
FT                   /db_xref="UniProtKB/TrEMBL:A7KI46"
FT                   /protein_id="ABS29951.1"
FT                   /translation="MDSRTGELITAHQATSGVYTFEINNPLYFKITEHSQRPFLMNHDI
FT                   ISIQIRFNHNLRKALGIHKCFLNFRIWTTLQSPTGHFLRVFRYQVYKYLNNIGVISLNN
FT                   VIRAVDYVLFDVFENTIDVIEQHEIKYNLY"
FT   CDS             complement(206..613)
FT                   /codon_start=1
FT                   /product="TrAP"
FT                   /db_xref="GOA:A7KI47"
FT                   /db_xref="InterPro:IPR000942"
FT                   /db_xref="UniProtKB/TrEMBL:A7KI47"
FT                   /protein_id="ABS29952.1"
FT                   /translation="MQPSSPSTSHCSQVSIKVQHKIAKKRQVRRRRVDLDCGCSYYQHL
FT                   NCNNHGFTHRGTHHCASSNEWRLYLRDKQSPLFQDNRTQPEAISNEPRHHFHSDKIQPQ
FT                   LEEGTGDSQMFSQLPHLDDLTVSDWSFFKSL"
FT   misc_feature    complement(522..>835)
FT                   /note="nonfunctional Rep due to mutation"
XX
SQ   Sequence 835 BP; 214 A; 160 C; 179 G; 282 T; 0 other;
     ttctaaccca gtgtatgcta cgttgaaaat acgtatctat ttttatgatg ctgtaacaaa        60
     ttaataaaga ttgtatttta tttcatgttg ttcaattaca tctattgtgt tctcaaatac       120
     atcgaataag acataatcaa ctgctctaat aacattgttt aatgaaatta cacctatatt       180
     attcaaatac ttatacactt gatacctaaa gactcttaaa aaatgaccag tcggagactg       240
     taaggtcgtc cagatgcgga agttgagaaa acatttgtga atccccagtg ccttcctcaa       300
     gttgtggttg aatcttatct gaatggaaat gatgtcgtgg ttcattagaa atggcctctg       360
     gctgtgttct gttatcttga aatagagggg attgtttatc tcgaaggtat aaacgccact       420
     cgttgcttga tgcgcagtga tgagttcccc tgtgcgtgaa tccatgattg ttgcagttga       480
     ggtgttggta gtatgagcag ccacagtcca gatctaccct tctacgcctc acttgtctct       540
     tcttggctat cttgtgttgg accttgattg atacttgcga acagtggctc gtagagggtg       600
     acgaaggttg cattcttgag agccccattt ttccaggata tgtttttttc ttcgctagat       660
     attccctata tgaggagtag gtcctggatt gcagaggaag ataggggaat ccccccttta       720
     atttgaatgg gcttcccgaa ctttgtgttg ctttgccagt ccctctgggc ccccatgaat       780
     tctttgaagt gctttaaata atgcgggtct acgtcatcaa tgacgttgta ccatg            835
//