ID EF423572; SV 1; linear; genomic RNA; STD; VRL; 6435 BP. XX AC EF423572; XX DT 13-MAY-2008 (Rel. 95, Created) DT 13-MAY-2008 (Rel. 95, Last updated, Version 1) XX DE Potato virus X isolate FX21, complete genome. XX KW . XX OS Potato virus X OC Viruses; Riboviria; Tymovirales; Alphaflexiviridae; Potexvirus. XX RN [1] RP 1-6435 RX DOI; 10.1111/j.1439-0434.2007.01365.x. RX AGRICOLA; IND44048829. RA Yu X.Q., Wang H.Y., Lan Y.F., Zhu X.P., Li X.D., Fan Z.F., Li H.F., RA Wang Y.Y.; RT "Complete Genome Sequence of a Chinese Isolate of Potato virus X and RT Analysis of Genetic Diversity"; RL J. Phytopathol. 156(6):346-351(2008). XX RN [2] RP 1-6435 RA Yu X., Gao R., Li X.; RT ; RL Submitted (05-FEB-2007) to the INSDC. RL Department of Plant Pathology, Shandong Agricultural University, No. 61, RL Daizong Street, Tai'an, Shandong 271018, China XX DR MD5; 30c59f570a54aaf0cce7369aea831c4f. DR EuropePMC; PMC5377869; 28466060. DR RFAM; RF00184; PVX_3. XX CC Genome sequence lacks part of non-coding region. XX FH Key Location/Qualifiers FH FT source 1..6435 FT /organism="Potato virus X" FT /host="potato" FT /isolate="FX21" FT /mol_type="genomic RNA" FT /country="China" FT /db_xref="taxon:12183" FT 5'UTR <1..84 FT gene 85..4455 FT /gene="RDRP" FT CDS 85..4455 FT /codon_start=1 FT /gene="RDRP" FT /product="RNA dependent RNA polymerase" FT /db_xref="GOA:B2WSF4" FT /db_xref="InterPro:IPR001788" FT /db_xref="InterPro:IPR002588" FT /db_xref="InterPro:IPR007094" FT /db_xref="InterPro:IPR027351" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/TrEMBL:B2WSF4" FT /protein_id="ABP87980.1" FT /translation="MAKVREVYQSFTDSTTKTLIQDEAYRNIRPIMEKHKLANPYAQTV FT EAANDLEGFGIATNPYSIELHTHAAAKTIENKLLEVLGSILPQEPVTFMFLKPRKLNYM FT RRNPRIKDIFHNVAIEPRDVARYPKETIIDKLTEITTDTAYISDTLHFLDPSYIVETFQ FT NCPKLQTLYATLVLPVEAAFKMESTHPNIYSLKYFGDGFQYIPGNHGGGAYHHEFAHLQ FT WLKVGKIKWRDPKDSFLGHLNYTTEQVEMHTVTVQLQESFAANHLYCIRRGDLLTPEVR FT TFGQPDRYVIPPQIFLPKVHNCKKPILKKTMMQLFLYVRTVKVAKNCDIFAKVRQLIKS FT SDLDKYSAVELVYLVSYMEFLADLQATTCFSDTLSGGLLTKTLAPVRAWIQEKKMQLFG FT LEDYAKLVKAVDFHPVDFSFKVETWDFRFHPLQAWKAFRPREVSDVEEMESLFSDGDLL FT DCFTRMPAYAVNAEEDLAAIRKTPEMDVGQEIKEPAGDRNQYSNPAETFLNKLHRKHSR FT EVKHQAVKKAKRLAEIQESMRAEREAEPNEMSGGMGAIPSNTELPSTNDAKQELTLPTT FT KPVPARWEDASFTDSSVEEEQVKLPGKEAVETATQQVIEGLPWKHWIPQLDAVGFKALE FT IQRDRSGTMIMPITEMVSGLEKEDFPEGTPKELARELFAMNRSPATIPLDLLRARDYGS FT DVKNKRIGALTKTQATSWGEYLTGKIESLTERKVAACVIHGAGGSGKSHAIQKALREIG FT KGSDITVVLPTNELRLDWSKKVPNTEPYMFKTYEKALISGTGSIVIFDDYSKLPPGYIE FT ALICFYSKIKLVILTGDSRQSVYHETAEDASIRHLGPATEYFSKYCRYYLNATHRNKKD FT LANMLGVYSERTGVTEISMSAEFLEGIPTLVPSDEKRKLYMGTGRNDTFTYAGCQGLTK FT PKVQIVLDHNTQVCSANVMYTALSRATDRIHFVNTSANSSAFWEKLDSTPYLKTFLSVV FT REQALKEYEPAEVESIREPEPQTHMCVENEESVLEEYKEELLEKFDREIHSESHGHSNC FT VQTEDTTIQLFSHQQAKDETLLWATIDARLKTSNQETNFREFLSKKDIGDVLFLNYQKA FT MGLPKERIPFSQEVWEACAHEVQSKYLSKSKCNLINGTVRQSPDFDENKIMVFLKSQWV FT TKVEKLGLPKIKPGQTIAAFYQQTVMLFGTMARYMRWFRQAFQPKEVFINCETTPEDMS FT AWVLNNWDFGRPSLANDYTAFDQSQDGAMLQFEVLKAKHHCIPEEIIQAYIDIKTNAQI FT FLGTLSIMRLTGEGPTFDANTECNIAYTHTKFDIPAGTAQVYAGDDSALDCVPEVKHSF FT HRLEDKLLLKSKPVITQQKKGSWPEFCGWLITPKGVMKDPIKLHVSLKLAEAKGELKKC FT QDSYEIDLSYAYDHKDSLHDLFDEKQCQAHTLTCRTLIKSGRGTVSLPRLRNFL" FT gene 4486..5166 FT /gene="TGB1" FT CDS 4486..5166 FT /codon_start=1 FT /gene="TGB1" FT /product="triple gene block 1" FT /note="TGBp1" FT /db_xref="GOA:B2WSF5" FT /db_xref="InterPro:IPR027351" FT /db_xref="UniProtKB/TrEMBL:B2WSF5" FT /protein_id="ABP87981.1" FT /translation="MDILIISLKSLGYSRTSKSLDSGPLVVHAVAGAGKSTALRKLILR FT HPTFTVHTLGVPDKVSIRTRGIQKPGPIPEGNFAILDEYTLDNATRNSYQALFADPYQA FT PEFSLEPHFYLETSFRVPRKVADLIAGCGFDFETNSQEEGHLEITGIFKGPLLGKVIAI FT DEESETTLSRHCVEFVKPCQVTGLEFKVVTIVSAAPIEEIGQSTAFYNAVTRSKGLTYV FT RAGT" FT gene 5147..5494 FT /gene="TGB2" FT CDS 5147..5494 FT /codon_start=1 FT /gene="TGB2" FT /product="triple gene block 2" FT /note="TGBp2" FT /db_xref="GOA:Q77RX1" FT /db_xref="InterPro:IPR001896" FT /db_xref="UniProtKB/TrEMBL:Q77RX1" FT /protein_id="ABP87982.1" FT /translation="MSAQGHRLTAPVNSEKVYIVLGLSFALVSITFLLSRNSLPHVGDN FT IHSLPHGGAYRDGTKAILYNSPNLGSRVSLHNGKNAAFAAVLLLTLLIYGSKYISQRNH FT TCACGNNHSSH" FT gene 5427..5639 FT /gene="TGB3" FT CDS 5427..5639 FT /codon_start=1 FT /gene="TGB3" FT /product="triple gene block 3" FT /note="TGBp3" FT /db_xref="GOA:Q77NQ5" FT /db_xref="InterPro:IPR003411" FT /db_xref="UniProtKB/TrEMBL:Q77NQ5" FT /protein_id="ABP87983.1" FT /translation="MEANTYLNAIILVLVVTIIAVISTSLVRTEPCVIKITGESITVLA FT CKLDAETIRAIADLKPLSVERLSFH" FT gene 5650..6363 FT /gene="CP" FT CDS 5650..6363 FT /codon_start=1 FT /gene="CP" FT /product="coat protein" FT /db_xref="GOA:Q77LU0" FT /db_xref="InterPro:IPR000052" FT /db_xref="UniProtKB/TrEMBL:Q77LU0" FT /protein_id="ABP87984.1" FT /translation="MSAPASTTQATGSTTSTTTKTAGATPATASGLFTIPDGDFFSTAR FT AIVASNAVATNEDLSKIEAIWKDMKVPTDTMAQAAWDLVRHCADVGSSAQTEMIDTGPY FT SNGISRARLAAAIKEVCTLRQFCMKYAPVVWNWMLTNNSPPANWQAQGFKPEHKFAAFD FT FFNGVTNPAAIMPKEGLIRPPSEAEMNAAQTAAFVKITKARAQSNDFASLDAAVTRGRI FT TGTTTAEAVVTLPPP" FT 3'UTR 6364..>6435 XX SQ Sequence 6435 BP; 1972 A; 1550 C; 1481 G; 1432 T; 0 other; gaaaactaaa ccaaacacca ccaacacaac caaacccacc acgcccaatt gtcacacacc 60 cgcttggaaa agcaagtctg acaaatggcc aaagtgcgcg aggtttacca atcctttaca 120 gactccacca caaaaactct catccaagat gaggcttata gaaatattcg tcccatcatg 180 gaaaaacata aactagctaa cccgtacgct cagacggtcg aagcggctaa tgatctagag 240 gggtttggca tagccaccaa tccctatagc attgaattgc atacacatgc agccgctaag 300 accatagaga ataaacttct agaggtgctt ggttccatcc taccacaaga acctgttaca 360 tttatgttcc ttaaacccag gaagctaaac tacatgagaa gaaacccgcg gatcaaggac 420 attttccaca atgttgccat cgaaccgaga gacgtagcaa ggtaccctaa ggaaacaata 480 attgacaaac tcacagagat cacaacggac acagcataca ttagtgacac tctgcacttc 540 ttggatccga gctacatagt ggagacattc caaaactgcc caaaactgca gacattgtat 600 gcgaccttag ttctccccgt tgaggcagcc ttcaaaatgg aaagcactca cccgaacata 660 tacagcctca aatacttcgg agatggtttc cagtatatac caggcaacca tggtggtgga 720 gcataccatc atgaatttgc tcatttacaa tggctcaaag tgggaaagat caagtggagg 780 gaccccaagg atagctttct cggacatctc aattacacga ctgagcaggt tgagatgcac 840 acagtgacag tacagttgca ggaatcgttc gcggcaaacc acttgtactg cattaggaga 900 ggagatttgc tcacaccgga ggtgcgcact ttcggccaac ctgacaggta tgtgattcca 960 ccacagatct ttctcccgaa agttcataac tgcaagaagc cgattcttaa gaaaactatg 1020 atgcagctct tcttgtatgt taggacagtt aaggtcgcaa aaaattgtga catttttgcc 1080 aaagtcagac aattaattaa atcatctgac ctggacaaat attctgctgt ggaactggtt 1140 tacttagtaa gctatatgga gttccttgcc gatctacaag ccaccacctg cttctcagac 1200 acactttctg gtggtttgct aacaaagacc cttgcaccgg tgagggcttg gatacaagag 1260 aaaaagatgc agctgtttgg tcttgaggac tacgcgaagt tagtcaaagc agttgatttc 1320 cacccagtgg atttctcttt taaagtggaa acttgggact tcagattcca ccccttgcaa 1380 gcgtggaaag ccttccgacc gagggaagtg tcggatgtag aggaaatgga aagtttgttc 1440 tcagatgggg acctgcttga ctgcttcaca agaatgccag cttacgcagt aaacgcagag 1500 gaagacttag ctgcaatcag gaaaacgccc gagatggatg tcggtcaaga aattaaagaa 1560 cctgcaggag acagaaatca atactcaaac cctgcagaaa ctttcctcaa caagctccat 1620 aggaaacaca gtagggaggt gaaacatcag gccgtaaaga aagctaaacg cctagccgaa 1680 atccaggagt ccatgagagc tgaaagggag gccgaaccaa atgagatgag cgggggcatg 1740 ggggcaatac ctagcaacac cgaacttccc agcacgaatg atgctaaaca agaactcaca 1800 ctcccaacca ctaaacctgt tcctgcaagg tgggaagatg cttcattcac agattctagt 1860 gtggaagagg agcaggtgaa actccctgga aaagaagccg ttgagacagc aacgcaacaa 1920 gtcatagaag gactcccttg gaaacactgg attcctcaac tagatgctgt tggattcaag 1980 gcgctggaaa ttcagaggga taggagtggg acaatgatca tgcccatcac agaaatggtc 2040 tccgggttgg aaaaagagga cttcccggaa ggaactccaa aagagttggc acgagaattg 2100 ttcgctatga acagaagccc tgccaccatc cctttggacc tgcttagagc cagagactac 2160 ggcagtgatg tgaagaacaa gagaattggt gccctcacaa agacacaagc aacaagttgg 2220 ggcgagtacc taacaggaaa gatagaaagc ctgactgaga ggaaagttgc ggcttgtgtc 2280 atccatggag ccggaggctc tgggaaaagt catgccatcc agaaggcatt gagagaaatc 2340 ggcaagggct cagacatcac tgtagtcctg ccgaccaatg aactgcggct agattggagt 2400 aagaaagtgc ccaacactga accatacatg ttcaagacct atgaaaaggc gttaatttcg 2460 ggaacaggta gtatagtcat ctttgacgac tactcaaaac ttcctcccgg ttacatagaa 2520 gccttaatct gtttctactc taagatcaag ctagtcattc taacaggaga tagtagacag 2580 agcgtctacc atgaaactgc tgaggacgca tccatcaggc atttaggacc agcgacagag 2640 tacttctcaa aatactgccg atactatctc aatgctacac accgcaacaa gaaagacctt 2700 gcgaacatgc tcggtgttta cagtgagaga acgggggtca ccgaaatcag catgagcgcc 2760 gagttcttag aaggaatccc aaccttagta ccctcggatg agaagagaaa gctgtacatg 2820 ggcactggga ggaacgacac gttcacatat gctggatgcc aggggctaac caagccgaaa 2880 gtacaaatag tgttggacca caacacccaa gtgtgtagcg cgaatgtgat gtacacggca 2940 ctttctagag ccacagacag gattcacttc gtgaacacaa gtgcaaactc ttcggccttc 3000 tgggaaaagt tagacagcac cccctatctc aagactttcc tatcagtggt gagagaacaa 3060 gcactcaagg agtacgagcc ggcagaggta gagtcaatcc gagagcctga gccccagaca 3120 cacatgtgtg ttgagaatga ggagtccgtg ctagaagagt acaaagagga actcttggaa 3180 aagtttgaca gagagatcca ctctgagtct catggtcatt caaactgtgt ccaaacagaa 3240 gacacaacca ttcagttgtt ttcgcatcaa caagcaaaag atgagaccct cctctgggcg 3300 actatagatg cgcggctcaa gaccagcaat caagagacaa acttccgaga attcttgagc 3360 aagaaggaca ttggggacgt tctgtttttg aactaccaaa aagctatggg tctgcccaaa 3420 gagcgtattc ccttttcaca agaggtctgg gaagcttgtg cccacgaagt acaaagcaag 3480 tacctcagta agtcaaagtg caacttgatc aacgggactg tgagacagag cccagacttt 3540 gacgaaaaca aaattatggt attcctcaag tcgcagtggg tcacaaaggt ggaaaagcta 3600 ggtctaccca agattaagcc gggtcaaacc atagcagctt tctatcagca gactgtgatg 3660 ctttttggaa ccatggctag gtacatgcga tggttcagac aggctttcca gccaaaagaa 3720 gtcttcataa actgtgagac cacgccagaa gacatgtctg catgggtctt gaacaactgg 3780 gatttcggca gacctagctt ggccaatgac tacacagcct tcgaccagtc tcaggatgga 3840 gctatgctgc aatttgaggt gctcaaagca aagcaccact gcataccaga ggaaatcatc 3900 caagcataca tagacattaa gaccaatgca cagattttcc taggcacatt gtcaatcatg 3960 cgcctgactg gtgagggtcc cacttttgat gcaaacactg agtgcaacat agcttacacc 4020 catacaaagt ttgacatccc agcaggaact gctcaagtct atgcaggaga cgactcagca 4080 ctggattgcg tcccagaagt gaagcatagc ttccacaggc ttgaagacaa attactcctc 4140 aagtcaaagc ccgtgatcac gcagcaaaag aaaggcagtt ggcctgagtt ttgtggttgg 4200 ctgattacac caaaaggggt gatgaaagac ccaattaagc tccatgtcag cttaaaattg 4260 gccgaagcta agggcgaact caagaaatgt caagactcct atgaaattga tctgagttat 4320 gcctacgacc ataaagactc tctgcacgac ttgttcgatg agaaacagtg tcaggcacat 4380 acactcactt gcaggacact aatcaagtca gggagaggca ctgtctcact tccccgcctc 4440 agaaactttc tttaaccgtt aagttacctt agagatttga ataagatgga tattctcatc 4500 attagtttga aaagtttagg ttattctagg acctctaaat ctttagattc aggacctttg 4560 gtagtacatg cagtagctgg agccggtaag tccacagccc taaggaagtt gatcctcaga 4620 cacccaacat tcaccgtaca tacactcggt gtccctgaca aggtgagtat cagaactaga 4680 ggcatacaga agccaggacc cattcctgag ggcaatttcg ccatcctcga tgagtatact 4740 ttagacaacg ctacaagaaa ctcataccag gcactttttg ctgaccctta tcaggcacct 4800 gagtttagcc tagagcccca cttctacttg gaaacatcat ttcgagtccc gaggaaagtg 4860 gcagatttaa tagcaggttg tggcttcgat ttcgagacca actcacagga agaagggcac 4920 ttagagatca ctggtatatt caaagggccc ctactcggga aggtgatagc cattgacgag 4980 gagtctgaga caacactgtc caggcattgt gttgagtttg ttaagccctg ccaagtgact 5040 ggacttgagt tcaaagtagt cactattgtg tctgccgcac caatagagga aattggccag 5100 tccacagcct tttacaacgc tgtcaccagg tcaaagggat tgacatatgt ccgcgcaggg 5160 acatagactg accgctccgg tcaattctga aaaagtgtac atagtattag gtctatcatt 5220 tgctttagtt tcaattacct ttctgctttc tagaaatagt ttaccccacg tcggcgacaa 5280 catccacagt ttgccacacg gaggagccta cagagacggc accaaagcga tcttgtacaa 5340 ctccccaaat ctagggtcac gagtgagtct acacaacgga aagaacgcag catttgctgc 5400 cgtcttgcta ctgaccttgc tgatctatgg aagcaaatac atatctcaac gcaatcatac 5460 ttgtgcttgt ggtaacaatc atagcagtca ttagtacttc cttagtgagg actgaacctt 5520 gtgtcatcaa gattactgga gaatcaatca cagtgttggc ctgcaaatta gatgcagaaa 5580 ccatcagagc cattgccgat ctcaaaccac tctccgttga acggttaagt ttccattgat 5640 actcgaaaga tgtcagcacc agctagcaca acacaggcca cagggtcaac tacctcaact 5700 accacgaaaa ctgcaggcgc aactcctgcc acagcttcag gactgttcac catcccggat 5760 ggggatttct ttagtacagc ccgcgccata gtagccagca atgccgtggc aacaaacgag 5820 gacctcagca agattgaggc tatttggaag gacatgaagg tgcccacaga cactatggca 5880 caggctgctt gggacttggt aagacactgt gctgatgtgg gctcatctgc tcaaacagaa 5940 atgatagata caggtcccta ttccaacggc atcagcagag ctaggctggc agctgcaatt 6000 aaagaggtgt gcacacttag gcaattttgc atgaagtatg ccccagtggt atggaactgg 6060 atgttgacca acaacagtcc acctgctaac tggcaagcac aaggtttcaa gcctgagcac 6120 aaattcgctg cattcgactt cttcaatgga gtcaccaacc cagctgccat catgcccaaa 6180 gaggggctca tccggccacc gtccgaagct gaaatgaatg ctgcccaaac tgctgctttt 6240 gtgaagatta cgaaagccag ggcacaatcc aacgactttg ccagcctaga tgcggctgtc 6300 actcgaggtc gtattactgg aacaacaacc gctgaggctg ttgtcactct cccaccacca 6360 taactacgtc tacataaccg acgcctaccc cagtttcata gtattttctg gtttgattgt 6420 atgaataata taaat 6435 //