ID EF417915; SV 1; circular; genomic DNA; STD; VRL; 2561 BP. XX AC EF417915; XX DT 03-MAR-2007 (Rel. 90, Created) DT 01-JAN-2010 (Rel. 103, Last updated, Version 2) XX DE Tomato yellow vein streak virus isolate Ba-3 segment DNA-A, complete DE sequence. XX KW . XX OS Tomato yellow vein streak virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2561 RX DOI; 10.1111/j.1365-3059.2006.01432.x. RX AGRICOLA; IND43821656. RA Ribeiro S.G., Inoue-Nagata A.K., Daniels J., Avila A.C.; RT "Potato deforming mosaic disease is caused by an isolate of Tomato yellow RT vein streak virus"; RL Plant Pathol. 55(4):569-569(2006). XX RN [2] RC Publication Status: Available-Online prior to print RP 1-2561 RX PUBMED; 19937269. RA Albuquerque L.C., Martin D.P., Avila A.C., Inoue-Nagata A.K.; RT "Characterization of tomato yellow vein streak virus, a begomovirus from RT Brazil"; RL Virus Genes 0:0(2009). XX RN [3] RP 1-2561 RA Albuquerque L.C., Fernandes-Carrijo F.R., Avila A.C., Ribeiro S.G., RA Inoue-Nagata A.K.; RT ; RL Submitted (01-FEB-2007) to the INSDC. RL Virology, Embrapa Vegetables, Km 09, BR060, Cx. Postal 218, Brasilia, DF RL 70359-970, Brazil XX DR MD5; 558167bdf760d7fdd8152b9b0a5eb775. DR EuropePMC; PMC3095596; 21603653. DR EuropePMC; PMC3485178; 23082767. XX FH Key Location/Qualifiers FH FT source 1..2561 FT /organism="Tomato yellow vein streak virus" FT /segment="DNA-A" FT /host="potato" FT /lab_host="tomato" FT /isolate="Ba-3" FT /mol_type="genomic DNA" FT /country="Brazil" FT /collected_by="Julio Daniels" FT /collection_date="1983" FT /db_xref="taxon:55216" FT gene 156..899 FT /gene="CP" FT CDS 156..899 FT /codon_start=1 FT /gene="CP" FT /product="AV1" FT /db_xref="GOA:A3RJ06" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:A3RJ06" FT /protein_id="ABN80220.1" FT /translation="MPKRDAPWRIMAGTTKVSRSSNYSPRGGISKRDAWVNRPMYRKPR FT IYRTLRGPDVPKGCEGPCKVQSYEQRHDISHLGKVMCISDITRGNCITHRVGKRFCVKS FT VYILGKIWMDENIKLKNHTNSVIFWLVRDRRPYGTPMDFGQVFNMFDNEPSTATVKNDL FT RDRFQVMHRFNAKVTGGQYASNEQALVRRFWKVNNHVVYNHQEAGKYENHTENALLLYM FT ACTHASNPLYATLKIRIYFYDSITN" FT gene complement(896..1294) FT /gene="REn" FT CDS complement(896..1294) FT /codon_start=1 FT /gene="REn" FT /product="AC3" FT /db_xref="GOA:A3RJ07" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:A3RJ07" FT /protein_id="ABN80223.1" FT /translation="MDSRTGELITAPQAANGVFIWEITNPLYFKIINVEDPLYTTTRIY FT HLQIRFNHNLRKALDLHKAFLNFQVWTTSLRASGMTYLSRFKYLVLLYLNQLGVISVNN FT VIRAVRFATDKSYVNYVLENHSIKFRLY" FT gene complement(1041..1430) FT /gene="TrAP" FT CDS complement(1041..1430) FT /codon_start=1 FT /gene="TrAP" FT /product="AC2" FT /db_xref="GOA:A3RJ08" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:A3RJ08" FT /protein_id="ABN80222.1" FT /translation="MLNTSSSTPPSIKPRHRAAKRKVIRRRRIDLNCGCSIYIHLNCRN FT NGFTHRGTHHCASSSEWRLYLGDYQSPLFQDNQRRGPPLHNDTDIPSTDTFQPQPAESV FT GSPQGFSQFPSLDDIPESFWDDIFK" FT gene complement(1342..2427) FT /gene="Rep" FT CDS complement(1342..2427) FT /codon_start=1 FT /gene="Rep" FT /product="AC1" FT /db_xref="GOA:A3RJ09" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:A3RJ09" FT /protein_id="ABN80221.1" FT /translation="MPLPKRFLVNAKNFFLTYPHCSLTKDEALSQLQALQTPTNKKFIR FT VTRELHEDGEPHLHVLIQFEGKFKCHNQRFFDLVSPTRSAHFHPNIQGAKSSSDVKTYM FT EKDGDFIDFGTFQIDGRSARGGCQSANDTYAKVLNADNPTTALNILKEEQPRDYVLHLD FT KIRTHVQRIFAKAPEPWVSPFQLSSFTNVPDEMQEWADEYFGRGAAARPERPISIIIEG FT DSRTGKTMWARALGPHNYLSGHLDFNSRVYSNEVHYNVIDDVTPQYLKLKHWKELIGAQ FT RDWQSNCKYGKPVQIKGGIPSIVLCNPGEGASYKDFLDKHENISLKTWTLHNAKYIFLN FT SPLYQTTTQSSQTEGNSPKTH" FT gene complement(1977..2270) FT /gene="AC4" FT CDS complement(1977..2270) FT /codon_start=1 FT /gene="AC4" FT /product="AC4" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:A3RJ10" FT /protein_id="ABN80224.1" FT /translation="MGNLISTCLYSSKANSNATINDSSIWYPQPDQHISIQTFRELKAR FT QTSRPTWRKTETSLILELSRSMEDQLEEVANLQTTLMPRFSTQIIQPRHSIY" XX SQ Sequence 2561 BP; 682 A; 487 C; 595 G; 797 T; 0 other; accggatggc cgcgcgattt tttttagtgg tccccctttg aatggccaat cagattttat 60 cctgaactct taattatttt gaaattctta ggcgctaagt tgttaaagtt atatatattg 120 gacattcatt agtggtcgac atactttaat tcaaaatgcc aaagcgggat gccccatggc 180 gtataatggc ggggaccact aaagtgtccc gctcttccaa ttattcacct cgtggaggta 240 tttccaagcg ggatgcttgg gttaacaggc ccatgtacag gaagcccagg atttatcgaa 300 cgttgagagg ccctgatgtt cctaaagggt gtgaaggccc atgtaaggtc cagtcctacg 360 agcagcgtca tgacatttct catcttggca aggtgatgtg tatctctgat atcacacgtg 420 gtaattgtat tacacaccgt gtcggtaagc gtttctgtgt taagtccgta tacattttag 480 ggaagatatg gatggacgaa aatattaaat tgaaaaacca cacgaacagc gtcatcttct 540 ggttggtaag ggatcggaga ccgtatggga cacctatgga ttttggccaa gtgtttaata 600 tgtttgataa tgagcctagt actgctactg tgaagaacga tcttcgtgat cggtttcaag 660 tcatgcatag gtttaatgct aaggttacgg gtggacagta tgctagcaac gagcaagctc 720 ttgtgcggcg tttctggaag gtcaacaatc atgtggtcta caaccatcag gaagcaggga 780 aatatgagaa tcacacggag aacgctttgt tattgtatat ggcatgtaca catgcttcta 840 acccactgta tgcaactttg aaaattcgga tctattttta tgattcgatt acaaattaat 900 aaagtctaaa ttttattgaa tgattttcaa gtacataatt tacataagat ttgtctgttg 960 cgaaacgaac agctctgatt acattattaa cggaaataac acctaattgg tttaaataca 1020 ataagactaa atacttaaat ctacttaaat atgtcatccc agaagctctc agggatgtcg 1080 tccagacttg gaaattgaga aaagccttgt ggagatccaa cgctttccgc aggttgtggt 1140 tgaaacgtat ctgtagatgg tatatccgtg tcgttgtgta gagggggtcc tctacgttga 1200 ttatcttgaa atagagggga ttggtaatct cccaaataaa gacgccattc gctgcttgag 1260 gcgcagtgat gagttccccg gtgcgtgaat ccattgttgc gacagttgag atggatgtaa 1320 atggagcagc cgcagtttag gtcaatgcgt cttcggcgaa ttaccttccg tttggctgct 1380 ctgtgtcgtg gtttgataga ggggggagtt gaggaagatg tatttagcat tatgcagtgt 1440 ccacgttttt aaagatatat tttcatgttt gtctaggaag tctttataac tagccccctc 1500 tcctggattg cagagcacga ttgatgggat tcctccttta atttgaactg gcttcccgta 1560 tttgcagttg ctttgccagt cacgttgggc cccaatgagc tctttccaat gttttagctt 1620 taggtattgc ggagtgacat catcaatgac gttataatgc acctcatttg aataaaccct 1680 agaattaaaa tctagatgtc cactcagata attatgtggg cctaatgcac gagcccacat 1740 cgtctttcct gtacgactat caccctcaat tataatacta ataggtctct ccggccgcgc 1800 agcggcaccc cttccgaaat attcgtcagc ccactcttgc atctcgtcag gaacattagt 1860 gaaggaggaa agttgaaacg gagaaaccca tggctctgga gcctttgcaa atattctctg 1920 gacatgtgtt cttattttat ccagatgtag aacataatct cgaggttgct cttcttttaa 1980 tatattgagt gccgtggttg gattatctgc gttgagaacc ttggcataag tgtcgtttgc 2040 agattggcaa cctcctctag ctgatcttcc atcgatctgg aaagttccaa aatcaatgaa 2100 gtctccgtct ttctccatgt aggtcttgac gtctgacgag cttttagctc cctgaatgtt 2160 tggatggaaa tgtgctgatc tggttgggga taccaaatcg aagaatcgtt gattgtggca 2220 tttgaatttg ccttcgaact gtataagcac gtggagatga ggttccccat cttcgtgaag 2280 ttctctggtt acgcgaataa atttcttgtt ggtaggtgtt tgaagtgcct gtaattgtga 2340 aagagcttcg tctttagtta atgaacaatg aggatatgta aggaagaaat tttttgcatt 2400 tactaagaaa cgctttggaa ggggcatttt agtaatataa agagttgctc cccgattgag 2460 ctccttcaaa cttggcaaat gaattgggga aagggtctca atatatagta gagtccatta 2520 tagaatatat ttgccacgtg gcggccatcc gttataatat t 2561 //