ID   EF408158; SV 1; linear; genomic RNA; STD; VRL; 646 BP.
XX
AC   EF408158;
XX
DT   31-OCT-2008 (Rel. 97, Created)
DT   29-DEC-2008 (Rel. 98, Last updated, Version 2)
XX
DE   Barley yellow dwarf virus-PAV isolate PAV on21-4 coat protein P3 gene,
DE   partial cds; and movement protein P4 gene, complete cds.
XX
KW   .
XX
OS   Barley yellow dwarf virus PAV
OC   Viruses; Riboviria; Luteoviridae; Luteovirus.
XX
RN   [1]
RP   1-646
RA   Delmiglio C., Pearson M.N.;
RT   "Sequence variation of barley yellow dwarf viruses from New Zealand
RT   grasses";
RL   Unpublished.
XX
RN   [2]
RP   1-646
RA   Delmiglio C., Pearson M.N.;
RT   ;
RL   Submitted (29-JAN-2007) to the INSDC.
RL   School of Biological Sciences, The University of Auckland, 3A Symonds St.,
RL   Private Bag 92019, Auckland 1142, New Zealand
XX
DR   MD5; cbb7911b265226765f2fe0c19be5a4cc.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..646
FT                   /organism="Barley yellow dwarf virus PAV"
FT                   /host="Microlaena stipoides"
FT                   /isolate="PAV on21-4"
FT                   /mol_type="genomic RNA"
FT                   /country="New Zealand:Coromandel"
FT                   /note="serogroup: PAV"
FT                   /db_xref="taxon:2169986"
FT   CDS             51..>646
FT                   /codon_start=1
FT                   /product="coat protein P3"
FT                   /note="ORF3; translated from subgenomic RNA1"
FT                   /db_xref="GOA:B6RCB3"
FT                   /db_xref="InterPro:IPR001517"
FT                   /db_xref="InterPro:IPR029053"
FT                   /db_xref="UniProtKB/TrEMBL:B6RCB3"
FT                   /protein_id="ABR26466.1"
FT                   /translation="MNSVGRRGPRRANQNGTRRRRRRTIRPVVVVQPNRAGLRRRNGRR
FT                   KGRGGANPVFRPTGGAEVFVFSVDNLKANSSGTIKFGPSLSQCPALSDGILKSYHRYKI
FT                   TSIRVEFKSHASATTAGAIFIELDTACKQSALASYINSFTISRTASKVFRAEAINGKEF
FT                   QESTIDQFWLLYKANGTAADTAGQFIITMSVSLMTA"
FT   CDS             94..555
FT                   /codon_start=1
FT                   /product="movement protein P4"
FT                   /note="ORF4; translated via leaky scanning of subgenomic
FT                   RNA1"
FT                   /db_xref="InterPro:IPR001964"
FT                   /db_xref="UniProtKB/TrEMBL:B6RCB4"
FT                   /protein_id="ABR26467.1"
FT                   /translation="MAQEGGAVEQFGQWLWSNPIEQDSDDEMVDAREEEGQILYLDQQA
FT                   GLRYSYSQSTTLKPTLPGQSNSAPVYRNAQRFQTEYLSPTTVTRSQVSVLSLSHTRPQL
FT                   RPALSLLNSTPRANNQPWLATLIPSQSAGPPQRSSEPKRLTGRNSRNQR"
XX
SQ   Sequence 646 BP; 190 A; 161 C; 160 G; 135 T; 0 other;
     gggtacttta tttccaataa aagtttcaga caccactaga gaggtggtga atgaattcag        60
     taggccgtag aggacctaga cgcgcaaatc aaaatggcac aagaaggagg cgccgtagaa       120
     caattcggcc agtggttgtg gtccaaccca atcgagcagg actcagacga cgaaatggtc       180
     gacgcaaggg aagaggaggg gcaaatcctg tatttagacc aacaggcggg gctgaggtat       240
     tcgtattctc agtcgacaac cttaaagcca actcttccgg gacaatcaaa ttcggcccca       300
     gtctatcgca atgcccagcg ctttcagacg gaatacttaa gtcctaccac cgttacaaga       360
     tcacaagtat ccgtgttgag tttaagtcac acgcgtccgc aactacggcc ggcgctatct       420
     ttattgaact cgacaccgcg tgcaaacaat cagccttggc tagctacatt aattccttca       480
     caatcagcag gaccgcctca aaggtcttca gagccgaagc gattaacggg aaggaattcc       540
     aggaatcaac gatagaccag ttctggttgc tctacaaggc caatggaaca gccgctgaca       600
     cagcaggaca gttcattatc acgatgagtg tcagtttgat gacggc                      646
//