ID EF408037; SV 1; circular; genomic DNA; STD; VRL; 2760 BP. XX AC EF408037; XX DT 23-APR-2007 (Rel. 91, Created) DT 23-APR-2007 (Rel. 91, Last updated, Version 1) XX DE Clerodendron yellow mosaic virus isolate iari, complete genome. XX KW . XX OS Clerodendron yellow mosaic virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2760 RA Sivalingam P.N., Satheesh V., John P., Chandramohan S., Malathi V.G.; RT "A new Begomovirus causing yellow mosaic disease in Clerodendron from RT India"; RL Unpublished. XX RN [2] RP 1-2760 RA Sivalingam P.N., Satheesh V., John P., Chandramohan S., Malathi V.G.; RT ; RL Submitted (29-JAN-2007) to the INSDC. RL Division of Plant Pathology, Indian Agricultural Research Institute, Pusa RL Campus, New Delhi, Delhi 110012, India XX DR MD5; 5cb6c0bb7bdebfa254b8b8df4477c9ce. XX FH Key Location/Qualifiers FH FT source 1..2760 FT /organism="Clerodendron yellow mosaic virus" FT /isolate="iari" FT /mol_type="genomic DNA" FT /country="India" FT /note="causes yellow mosaic disease in Clerodendron" FT /db_xref="taxon:326811" FT gene 121..477 FT /gene="AV2" FT CDS 121..477 FT /codon_start=1 FT /gene="AV2" FT /product="precoat protein" FT /db_xref="GOA:A4ZRZ9" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:A4ZRZ9" FT /protein_id="ABP58639.1" FT /translation="MWDPIVNDLPETVHGFRSMLAIKYLQAVENTYSPDTLGYDLVRDL FT ISVLRARNYVEATRRYHNFHARIKGATTFELRKPICQPCHCPHCGRHKKTGLGQQAHEQ FT EAQMVSNLQKPRCA" FT gene 281..1051 FT /gene="AV1" FT CDS 281..1051 FT /codon_start=1 FT /gene="AV1" FT /product="coat protein" FT /db_xref="GOA:A4ZS00" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:A4ZS00" FT /protein_id="ABP58638.1" FT /translation="MSKRPGDIIISTPASKVRRRLNFESPFANRAIAPIVGVTRRQAWV FT NRPTNRKPKWYRIYKSPDVPRGCEGPCKVQSFESRHDISHIGKVMCVSDVTRGIGLTHR FT VGKRFCVKSVYVLGKIWMDENIKTKNHTNSVMFFLVRDRRPIDKPQDFGDVFNMFDNEP FT STATVKNVNRDRYQVLRKWYRTVTGGQYASKEQALVRRFIRVNNYVVYNQQEAGKYENH FT TENALMLYMACTHASNPVYATLKIRIYFYDSVSN" FT gene complement(1048..1452) FT /gene="AC3" FT CDS complement(1048..1452) FT /codon_start=1 FT /gene="AC3" FT /product="replication enhancer protein" FT /db_xref="GOA:A4ZS01" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:A4ZS01" FT /protein_id="ABP58642.1" FT /translation="MDSRTGESITAAQAMNGVYIWEVPNPLYFRILSHLDRPFFRNHDI FT ITIQIRFNHNLRRALGLHKCWLTFRIWTSLTPQTGRFLRVFRTQVLRYLDNLGVICINN FT VFKAVDHVLYNVINNTIDVEISHEIKFLLY" FT gene complement(1193..1600) FT /gene="AC2" FT CDS complement(1193..1600) FT /codon_start=1 FT /gene="AC2" FT /product="transcriptional activator protein" FT /db_xref="GOA:A4ZS04" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:A4ZS04" FT /protein_id="ABP58641.1" FT /translation="MQNSSPSKSHSSQVPIKVQHRIAKRRAFRRKRVDLNCGCSYYVSL FT NCHNHGFTHRGVHHCSSSNEWRVYLGGSKSPLFQDPKPPGPTILPEPRHNNNPDPVQPQ FT PEESTGTSQMLANLPDLDEFNSSDWAFLTGL" FT gene complement(1494..2588) FT /gene="AC1" FT CDS complement(1494..2588) FT /codon_start=1 FT /gene="AC1" FT /product="replication initiator protein" FT /db_xref="GOA:A4ZS02" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:A4ZS02" FT /protein_id="ABP58640.1" FT /translation="MPRINRFSVSAKNIFLTYSKCPIPKEQMLELIKNISCPSEKLFIR FT VAQEKHRDGSLHLHALIQFKGKAKFRNERHFDVTHPNTSSQFHAHIQGARSSSDVKRYI FT EKDGDYVEWGRFQIDGRSARGGQQTANDAAAEALNSGSAEAALNVIREKLPRDFIFQYH FT NLKSNLDRIFAPPLEVYVSPFLSSSFDRVPEELEEWVSENVKSAAARPYRPNSIVVEGD FT SRTGKTLWARSLGPHNYLCGHLDLSPKIYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPVQIKGGIPTIFLCNPGPNSSYKEFLDEEKNSALKQWAIKNAKFITLQEPL FT FSGTNQGPTQNSQEESIPQKTSGP" FT gene complement(2174..2431) FT /gene="AC4" FT CDS complement(2174..2431) FT /codon_start=1 FT /gene="AC4" FT /product="AC4" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:A4ZS03" FT /protein_id="ABP58643.1" FT /translation="MGLCISMLSYNSRVKPSSEMRDISMSLIPTPPPNSMRTSRELDPA FT LMSRDTSRRTEITSNGVDFRSMEDLLEEVNRQLTMLQLRH" XX SQ Sequence 2760 BP; 751 A; 584 C; 621 G; 804 T; 0 other; accggatggc aacggccccg cgtgtgggac ccaccactaa ccaatgaaaa cgctccctga 60 aagctacgtt atcttgattt ttcgttattt aacacgtgtc gtgtgaatat tggttgcatc 120 atgtgggatc ctatcgtgaa cgatctacct gaaaccgtac atgggtttcg ttctatgctt 180 gcaatcaagt atctacaggc tgtagaaaat acgtattctc cggatacgct gggatacgat 240 cttgtacgtg atttgatatc tgttctacgt gcaagaaatt atgtcgaagc gaccaggaga 300 tatcataatt tccacgcccg catcaaaggt gcgacgacgt ttgaacttcg aaagcccatt 360 tgccaaccgt gccattgccc ccattgtggg cgtcacaaga agacaggcct gggtcaacag 420 gcccacgaac aggaagccca aatggtatcg aatttacaaa agcccagatg tgcctagggg 480 ctgtgaaggc ccatgcaagg tccaatcatt cgagtccaga catgatatat ctcatattgg 540 caaggtgatg tgcgtaagcg atgtcacacg tggcattggt cttactcatc gagttggcaa 600 gagattttgt gtaaaatctg tgtatgtttt gggaaagatc tggatggatg aaaacataaa 660 gactaagaac cacactaata gtgtgatgtt ctttttggtt cgtgatcgga gaccaatcga 720 caagccacaa gattttggtg acgtttttaa tatgtttgat aatgagccca gtacggcaac 780 tgtgaagaac gttaatcgcg atcgatatca ggttttacgt aagtggtatc ggacggtcac 840 tggtggtcag tacgcgtcta aggagcaggc attagttagg agatttatta gggttaataa 900 ttatgttgtt tataatcaac aagaagctgg gaaatacgag aatcatactg agaacgctct 960 tatgttgtat atggcatgca ctcatgcctc taaccccgtg tatgctactc tgaagatacg 1020 gatatatttc tatgattctg tatcaaatta atacaaaaga aattttattt catgagagat 1080 ctcaacatca atcgtgttgt ttattacatt gtacaataca tgatctacag ccttaaacac 1140 gttattaata cagataacac ctaaattatc taaataacgc aaaacttggg tcctaaagac 1200 ccgtaagaaa cgcccagtct gaggagttaa actcgtccag atccggaagg ttagccaaca 1260 tttgtgaagt cccagtgctc tcctcaggtt gtggttgaac cggatctgga ttgttattat 1320 gtcgtggttc cggaagaatg gtcggtccag gtggcttagg atcctgaaat agaggggatt 1380 tggaacctcc cagatataca cgccattcat tgcttgagct gcagtgatgg actcccctgt 1440 gcgtgaatcc atggttgtga cagttgaggc tgacgtaata cgagcagccg cagttaaggt 1500 ccactcgttt tctgcggaat gctctcctct tggctattct gtgttggacc ttgattggta 1560 cctgagaaga gtggctcttg gagggtgatg aattttgcat tcttgatggc ccactgcttg 1620 agtgcagaat tcttttcttc gtccaagaat tctttatagc tggaattggg ccctggattg 1680 cagaggaaga ttgttgggat tccgccttta atttgaactg gctttccgta tttcgtgttt 1740 gattgccaat ccctctgggc ccccatgaat tctttaaagt gtttcaaata atgcggatct 1800 acgtcatcaa tgacgttata ccaagcatcg tttgaataaa ttttagggct taaatccaaa 1860 tgcccacata aataattatg tgggcctaat gatctggccc ataaagtctt ccctgtccga 1920 ctatcgccct cgacgacaat actattaggt ctatatggcc gcgcagcggc actcttcaca 1980 ttctcagaca cccactcttc taactcctca gggactctat caaacgaaga agacaaaaaa 2040 ggactaacat aaacctctaa tggaggtgca aaaatcctat ctaaatttga ttttaaatta 2100 tgatactgga aaataaaatc tcttgggagt ttctccctaa taacatttaa agcagcttca 2160 gcagacccag aatttaatgc ctcagctgca gcatcgttag ctgtctgttg acctcctcta 2220 gcagatcttc catcgatctg aaatcgaccc cattcgacgt aatctccgtc cttctcgatg 2280 tatctcttga catcagagct ggatctagct ccctggatgt gcgcatggaa ttgggaggag 2340 gtgttgggat gagtgacatc gaaatgtctc tcatttcgga acttggcttt acccttgaat 2400 tgtatgagag catggagatg cagagaccca tctctgtgtt tctcttgtgc aaccctaatg 2460 aacagtttct cagatggaca tgaaatgttt ttaatgagct cgagcatctg ttcttttgga 2520 atggggcatt ttgaataagt gaggaaaatg tttttagcgc taactgaaaa cctatttatg 2580 cgaggcatgt ttgaccggaa gtgtccccaa ttgaccaccc tctctaaaac tcagggaatt 2640 ggggacactg gggacgcatt tatactagtg tccccaaatg gcataatcgt aatttttgga 2700 tctgaaattc aaatctggct cgccacgtgg acctcaccgt tgccatccga ttataatatt 2760 //