ID EF373060; SV 1; circular; genomic DNA; STD; VRL; 2728 BP. XX AC EF373060; XX DT 18-FEB-2007 (Rel. 90, Created) DT 19-MAR-2008 (Rel. 95, Last updated, Version 3) XX DE Mesta yellow vein mosaic virus isolate Barackpore segment DNA-A, complete DE sequence. XX KW . XX OS Mesta yellow vein mosaic virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2728 RX DOI; 10.1007/s00705-007-1029-7. RX PUBMED; 17619113. RA Chatterjee A., Ghosh S.K.; RT "A new monopartite begomovirus isolated from Hibiscus cannabinus L. in RT India"; RL Arch. Virol. 152(11):2113-2118(2007). XX RN [2] RP 1-2728 RA Chatterjee A., Ghosh S.K.; RT "Molecular characterization of Geminivirus associated with yellow vein RT mosaic disease of mesta"; RL Unpublished. XX RN [3] RP 1-2728 RA Chatterjee A., Ghosh S.K.; RT ; RL Submitted (19-JAN-2007) to the INSDC. RL Crop Protection, Central Research Institute for Jute and Allied Fibres, RL Barrackpore, West Bengal 700120, India XX DR MD5; 334e9ff1b3ae75fde25d0d5835e5eec5. DR EuropePMC; PMC3001556; 20215875. DR EuropePMC; PMC3142377; 21412047. XX FH Key Location/Qualifiers FH FT source 1..2728 FT /organism="Mesta yellow vein mosaic virus" FT /segment="DNA-A" FT /host="Hibiscus cannabinus L." FT /isolate="Barackpore" FT /mol_type="genomic DNA" FT /country="India" FT /db_xref="taxon:360579" FT CDS 132..479 FT /codon_start=1 FT /product="pre-coat protein" FT /db_xref="GOA:A3FF32" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:A3FF32" FT /protein_id="ABN48857.1" FT /translation="MWDPLLNEFPETVHGFRCMLAIKYLQQLSEEYSPDTVGYDLIRDL FT ISILRSRNYVEASCRYRHFYPRVEGASSTELRQPLCNPCSCPHCPRHKVSYVGEQAHVS FT EAQNVQDVQKP" FT CDS 292..996 FT /codon_start=1 FT /product="coat protein" FT /db_xref="GOA:A3FF33" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:A3FF33" FT /protein_id="ABN48858.1" FT /translation="MSKRPADIVISTPASKVRRRLNFDSPYATRAVAPTVRVTKSRMWA FT NRPMYRKPRMYRMYRSPDVPKGCEGPCKVQSFDAKNDIGHMGKVICLSDVTRGIGLTHR FT VGKRFCVKSLYFVGKIWMDENIKTKNHTNTVMFWIVRDRRPSGTPNDFQQVFNVYDNEP FT STATVKNDQRDRFQVLRRFQATVTGGQYAAKEQAIIRKFYRVNNYVVYNHQEAGKYENH FT TVLMPLTLCMLL" FT CDS complement(1037..1441) FT /codon_start=1 FT /product="replication initiator protein" FT /db_xref="GOA:A3FF34" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:A3FF34" FT /protein_id="ABN48859.1" FT /translation="MDLRTGEPITAAQAWSGAYIWEVPNPLYFKILSHEDRPYSSNMDI FT ITVRIQFNYNLRRALGVRKCFLTFRIWTTLHPPTGLFLRVFKTQVLKYLKNLGVISLNA FT IIRAVDHVLYNKLEQTMYVDQYSEIKFDLY" FT CDS complement(1134..1586) FT /codon_start=1 FT /product="transcription activator protein" FT /db_xref="GOA:A3FF35" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:A3FF35" FT /protein_id="ABN48860.1" FT /translation="MRSSSPLKDHCTQVPIKVQHREAKRRNRRKRVDLECGCSYYLSIN FT CFNHGFTHRGTHHCSSSMEWRLYLGSSKSPLFQNPQPRGPSLFEQHGHNNSQDPIQLQP FT SESSGSAQVFSDLPNLDDLTPSDWSFLKGIQNPSAQVSQKSGCNLT" FT CDS complement(1483..2574) FT /codon_start=1 FT /product="replication enhancer protein" FT /db_xref="GOA:A3FF36" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:A3FF36" FT /protein_id="ABN48861.1" FT /translation="MPPRRNGIYSKNYFITYPKCSLTKEETLSQLLNLQTPTSKKIYIK FT ICRELHEDGTPHLHVLIQFEGKFKCQNMRFFDLVSPNRSAHFHPNIQGAKSSSDVKSYI FT DKDGDILEWGQFQIDGRSARGGQQTANDAYAAALNAGSKSEALRVIKELAPKDFVLQFH FT NLNANLDRIFQEPPAPYVSPFSSSSFNQVPEELEEWASENVVDAAARPLRPQSIVIEGD FT SRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHFLKHFKEFMGAQRDW FT QSNTKYGKPVQIKGGIPTIFLCNPGPISSYKEFLEEEKNTALKNWAVKNAIFVTLEGSL FT YSGTNQSTAQGSEETQQEEESRS" FT CDS complement(2115..2417) FT /codon_start=1 FT /product="transcriptional regulator protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:A3FF37" FT /protein_id="ABN48862.1" FT /translation="MGLLTCMFSSSSRGNSSARICDSSTWSPQTDQHISIRTYRELNPA FT PTSSPTSTRTGTFSNGANFRSTEGQQEEGSRQPTTLTPQHLTREVSQRLLESLRN" XX SQ Sequence 2728 BP; 702 A; 571 C; 625 G; 830 T; 0 other; accggatggc cgcgcgattt ttttgtgggc ccctccacta actcttgtcg gccaatcata 60 tgacgcgctc aaagcttaaa taaatttcct gcctattata agtacttcgt cgctaagttc 120 ttgtttgaaa aatgtgggat ccacttttaa acgagtttcc cgagacggtt cacgggtttc 180 gttgcatgct tgctatcaaa tatcttcaac aattgtctga ggaatactcc cctgatacgg 240 ttgggtacga tctaattcgc gatttaattt ctatcttacg ttctaggaat tatgtcgaag 300 cgtcctgccg atatcgtcat ttctaccccc gcgtcgaagg tgcgtcgtcg actgaacttc 360 gacagcccct atgcaacccg tgcagttgcc cccactgtcc gcgtcacaaa gtctcgtatg 420 tgggcgaaca ggcccatgta tcggaagccc agaatgtaca ggatgtacag aagccctgat 480 gttcctaagg gatgtgaagg cccatgtaag gtgcagtctt ttgatgcgaa gaatgatatt 540 ggtcacatgg gtaaggttat ttgtctttct gatgttacta ggggtattgg gctgacccat 600 cgagtaggga aacgtttctg cgtgaagtca ttgtattttg ttggcaaaat ttggatggac 660 gagaacatca agaccaagaa ccatacgaat actgttatgt tttggattgt tagagatagg 720 cgtccttcag gaaccccaaa cgatttccag caagtgttca atgtttatga taacgagccc 780 tctacggcta ctgtgaagaa cgaccagcgt gatcgttttc aggtgttgag gaggtttcaa 840 gcaacagtca caggtggtca atatgctgct aaggaacaag ctataattag gaaattctat 900 cgtgttaaca attatgtggt gtataatcac caggaagctg ggaagtacga aaaccacact 960 gtactcatgc ctctaaccct gtgtatgcta ctttgaaagt taggagttac ttctacgatt 1020 ctgtaacaaa ttaatattaa taaagatcga attttatttc tgaatattga tctacataca 1080 tagtttgttc caatttatta tacaatacat gatctactgc tctaataatt gcgttaagtg 1140 agattacacc cagatttttg agatacttga gcacttgggt tttgaatacc cttaagaaaa 1200 gaccagtcgg agggtgtaag gtcgtccaga ttcggaaggt cagaaaacac ttgcgcactc 1260 ccagagctct ccgaaggttg tagttgaatt ggatcctgac tgttattatg tccatgttgc 1320 tcgaataagg acggtcctcg tggctgagga ttttgaaata gaggggattt ggaacttccc 1380 agatataggc gccactccat gcttgagctg cagtgatggg ttcccctgtg cgtaaatcca 1440 tggttgaagc agttaatgga tagataataa gaacacccgc attcaagatc tactctcttc 1500 ctcctgttgc gtctcttcgc ttccctgtgc tgtactttga ttggtacctg agtacagtga 1560 tccttcaagg gtgacgaaga tcgcattctt cactgcccag tttttgagtg cggtgttctt 1620 ttcctcctct agaaattctt tataactgct gatgggacca ggattgcaga ggaagattgt 1680 tggtattccg cctttaattt gaactggctt cccgtacttg gtattggatt gccagtccct 1740 ttgggccccc atgaactctt taaagtgctt gaggaagtgc ggatctacgt catcaatgac 1800 gttataccat gcgtcgttac tgtacacctt tggactaaga tctaagtgcc cacacagata 1860 gttatgtggg cctaaagacc tagcccacat tgtcttccca gtacgactat ctccctcaat 1920 tactatactt tgaggtctca ggggccgcgc agcggcgtcg acaacatttt ccgacgccca 1980 ctcttcaagt tcttctggaa cttgattgaa agaagaagag gaaaaaggag aaacataagg 2040 agctggtggc tcctgaaata tcctgtctag atttgcattt aaattatgaa attgtagtac 2100 aaaatcttta ggagctagtt ccttaatgac tctaagagcc tctgacttac ttcccgcgtt 2160 aagtgctgcg gcgtaagcgt cgttggctgt ctgctgccct cctcttgctg accttccgtc 2220 gatctgaaat tggccccatt cgagaatgtc cccgtccttg tcgatgtagg acttgacgtc 2280 ggagctggat ttagctccct gtatgttcgg atggaaatgt gctgatctgt ttggggagac 2340 caagtcgaag aatcgcatat tctggcactt gaatttcccc tcgaactgga tgagaacatg 2400 caagtgagga gtcccatctt catgaagctc tctgcagatt ttaatatata ttttttttga 2460 agttggggtt tggagattta ataattggga aagtgtttcc tctttggtga gagaacattt 2520 gggataagtg atgaaatagt ttttggaata aataccgtta cgccttggag gcatgttgac 2580 tagaattgat caccgattga ccgctcttgc aactctctcc tgtatatcgg tgatcaatat 2640 atagtgatcg ccaaatggca taatggtaat aaaacaactt ttatttgaaa ttcggaaaaa 2700 aaatttttgc ggccatccgc ttaatatt 2728 //