ID   EF370401; SV 1; linear; genomic RNA; STD; VRL; 1689 BP.
XX
AC   EF370401;
XX
DT   14-FEB-2007 (Rel. 90, Created)
DT   14-FEB-2007 (Rel. 90, Last updated, Version 1)
XX
DE   Tomato ringspot virus isolate N-1 coat protein gene, partial cds.
XX
KW   .
XX
OS   Tomato ringspot virus
OC   Viruses; Riboviria; Picornavirales; Secoviridae; Comovirinae; Nepovirus.
XX
RN   [1]
RP   1-1689
RA   Pinkerton J.N., Kraus J.E., Martin R.R., Schreiner R.P.;
RT   "Epidemiology of Xiphinema americanum and Tomato Ringspot Virus on red
RT   raspberry, Rubus idaeus";
RL   Unpublished.
XX
RN   [2]
RP   1-1689
RA   Kraus J.E., Pinkerton J.N., Martin R.R.;
RT   ;
RL   Submitted (17-JAN-2007) to the INSDC.
RL   USDA/ARS, Horticultural Crops Research Laboratory, 3420 NW Orchard Ave.,
RL   Corvallis, OR 97330-5098, USA
XX
DR   MD5; c88eafe2dc83545536565ed975030b20.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1689
FT                   /organism="Tomato ringspot virus"
FT                   /host="Rubus idaeus"
FT                   /isolate="N-1"
FT                   /mol_type="genomic RNA"
FT                   /country="USA:Clark County, WA"
FT                   /db_xref="taxon:12280"
FT   CDS             <1..1689
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /db_xref="GOA:A3FEN1"
FT                   /db_xref="InterPro:IPR005054"
FT                   /db_xref="InterPro:IPR005305"
FT                   /db_xref="InterPro:IPR005306"
FT                   /db_xref="InterPro:IPR029053"
FT                   /db_xref="UniProtKB/TrEMBL:A3FEN1"
FT                   /protein_id="ABN45884.1"
FT                   /translation="GGSWQEGTEAAFLGKVTCAKDAKGGTLLHTLDIIKECKSQNLLRY
FT                   KEWQRQGFLHGKLRLRCFIPTNIFCGHSMMCSLDAFDRYDSNVLGASFPVKLASLLPTE
FT                   VISLADGPVVTWTFDIGRLCGHGLYYSEGAYARPKIYFLILSDNDVPAEADWQFTYQLL
FT                   FEDHTFSNSFGAVPFITLPHVFNRLDIGYWRGPTEIDLTSTPAPNAYRLLFGLSTVISG
FT                   NMSTLNANQALLRFFQGSNGTLHGRIKKIGTALTTCSLLLSLRYKDASLTLETAYQRPH
FT                   YILADGQGAFSLPISTPHAATSFLEDVLRLEIFAIAGPFSPKDNKAKYQFMCYFDHIEL
FT                   VEGVPRTIAGEQQFNWCSFKNFKIDDWRFEWPARLPDILDDKSEVLLRQHPLSLLISST
FT                   GFFTGRAIFVFQWGLNTAAGNMKGSFSARLAFGKGVEEIEQTSTVQPLVGACEARIPVE
FT                   FKTYTGYTTSGPPGSMEPYIYVRLTQAKLVDRLSVNVILQEGFSFYGPSVKHFKKEVGT
FT                   PSATLGTNNPVGRPPENVDTGGPGGQYAAALQAAQQAGKNPFGRG"
XX
SQ   Sequence 1689 BP; 416 A; 355 C; 405 G; 513 T; 0 other;
     ggcgggtcct ggcaagaagg tactgaagcc gcttttttag gcaaagttac ctgtgcgaag        60
     gacgccaagg gtggaacttt attgcacact ttggatatta taaaagagtg caaatcccaa       120
     aatttattaa ggtataaaga atggcaacgt caaggctttc ttcatggaaa gcttagattg       180
     cgctgcttca tacccactaa cattttttgt gggcattcca tgatgtgttc cttggatgcg       240
     tttgatcgtt atgattcgaa cgtgctaggt gctagttttc cagtgaagtt ggcaagttta       300
     ttgccaacgg aggtgattag tctagctgat ggacccgtgg tcacgtggac gtttgatatt       360
     ggacgtctgt gtggtcatgg tctctattat tctgagggcg cttatgcgag gcccaaaatt       420
     tactttttaa ttctttccga taatgatgtt cctgcagaag cagattggca atttacctat       480
     cagcttttgt ttgaggatca tacattttcg aattcctttg gggcggttcc ttttattacc       540
     ttaccccatg tatttaatag attagatata ggctattggc gcgggccaac agagatagat       600
     ttaacatcaa ctcccgcacc aaacgcctat cgtttacttt ttggcttgtc cactgttatt       660
     agtggtaaca tgtcaacttt gaatgccaat caagccctat tgcgtttttt ccagggctcg       720
     aatggcactt tacatgggcg cattaaaaag atagggacag cacttacaac ctgttccctt       780
     ttactatcgt tgcgctacaa agatgcgagt ctcacattgg agaccgcata tcaaaggccc       840
     cattacattt tggctgacgg gcaaggggct ttttcactac caatttctac cccccatgca       900
     gcaacctcct ttttagagga cgtgttgcgt ctggagattt ttgctattgc tgggcctttt       960
     agtcccaaag ataataaagc aaaataccaa ttcatgtgtt atttcgatca catagaactg      1020
     gttgaggggg tacctagaac tatagcgggc gaacagcagt tcaactggtg tagttttaaa      1080
     aatttcaaaa tcgatgactg gaggtttgag tggccggctc gccttccaga tatacttgat      1140
     gataagtcag aagtgctttt gaggcaacat cctttatctc tgcttatctc atctaccggt      1200
     ttttttacgg gtagagccat ttttgttttc cagtggggtt tgaatactgc tgctgggaat      1260
     atgaaaggct cattttctgc gcgcctggcc tttggcaagg gcgttgagga aattgagcaa      1320
     acgtcaacag tgcaaccact tgttggcgct tgtgaagctc gtatacccgt ggagtttaag      1380
     acttacacgg gttatactac ttcgggtcct cctggatcca tggaaccata catttacgtg      1440
     aggcttacgc aagctaagct tgtggatagg ctttctgtga atgttatttt acaggaggga      1500
     ttttctttct atggacctag cgtcaaacat ttcaagaaag aagtcggcac gcctagtgcc      1560
     accctaggga caaataaccc cgttgggcgc ccacctgaga atgtcgatac agggggtcct      1620
     ggcggccagt atgcagctgc cttacaagca gctcagcaag ctgggaaaaa tcctttcggg      1680
     cgtggttga                                                              1689
//