ID   EF362621; SV 1; linear; genomic RNA; STD; VRL; 1605 BP.
XX
AC   EF362621;
XX
DT   14-FEB-2007 (Rel. 90, Created)
DT   14-FEB-2007 (Rel. 90, Last updated, Version 1)
XX
DE   Nerine yellow stripe virus polyprotein gene, partial cds.
XX
KW   .
XX
OS   Nerine yellow stripe virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1605
RA   Pham K.T.K., Blom-Barnhoorn G.J., van Leeuwen P., Derks A.F.L.M.;
RT   "Molecular characterization of potyviruses causing mosaic disease of
RT   Hymenocallis in the Netherlands";
RL   Unpublished.
XX
RN   [2]
RP   1-1605
RA   Pham K.T.K., Blom-Barnhoorn G.J., van Leeuwen P., Derks A.F.L.M.;
RT   ;
RL   Submitted (15-JAN-2007) to the INSDC.
RL   Applied Plant Research, Section Flower Bulbs and Nursery Stocks, Wageningen
RL   UR, Postbus 85, 2160 AB, Lisse, The Netherlands
XX
DR   MD5; 6b865c1dbeca46be93ba9464f6947315.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1605
FT                   /organism="Nerine yellow stripe virus"
FT                   /host="Nerine hybrid Ne800"
FT                   /mol_type="genomic RNA"
FT                   /country="Netherlands"
FT                   /isolation_source="diseased plant material"
FT                   /db_xref="taxon:424679"
FT   CDS             <1..1425
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /note="contains NIb and coat proteins"
FT                   /db_xref="GOA:A3F8Z5"
FT                   /db_xref="InterPro:IPR001205"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="InterPro:IPR007094"
FT                   /db_xref="UniProtKB/TrEMBL:A3F8Z5"
FT                   /protein_id="ABN45757.1"
FT                   /translation="GNNSGQPSTVVDNTLMVVIAMQYSLLLNGIELEQQDSVCKYFANG
FT                   DDLLIAIEPTYATRLFDSFECNFKQLGLNYDFSNRVLNKEELIFMSHKGVLVDGLYIPK
FT                   LERERIVSILEWDKSSEPEQRLEAICASMIEAWGYKDLLYEIRKFYAWVLEQAPYSELA
FT                   RNGKAPYLAETALRHLYTNSEIRDDELLNYIEAFQSDISFDEEMVDVIFQSQETFNAGT
FT                   ELARSQQAQMPVTPSQDVNVGTSGQTALIQSKMFSKKLRVVKAKGKTTLNLEHLLHYKP
FT                   IQEDLFNTKSSQQQFDNWHMKVQEAYDVDDKQMEILMNGLIVWCIENGTSSELKGTWRM
FT                   DFGDQQVEYDIQPLIQHSQPTFRQIMRHFSKIAEAYIAMRNQEERYMPRYALQRGLTDI
FT                   SLARYGFDFFDTTAATPQRAREAVMQMKAAAVRGKETRLFSLDGNISVNTENTERHTVE
FT                   DVTQDMHSLLGVRGIK"
FT   3'UTR           1426..1605
XX
SQ   Sequence 1605 BP; 514 A; 260 C; 362 G; 469 T; 0 other;
     ggtaataata gtggtcagcc ttcaacggtg gtagacaaca cacttatggt tgttatagcc        60
     atgcagtatt ctttactgtt gaatggtatt gagctagagc agcaagactc tgtttgtaaa       120
     tatttcgcta atggtgatga tttgctcata gctatagaac caacatatgc aactagattg       180
     tttgatagtt ttgagtgtaa tttcaaacag ttaggtttga actatgattt ttcaaataga       240
     gttttgaata aagaggagtt gatttttatg tctcacaaag gtgtattagt tgacggcttg       300
     tatataccaa aacttgaacg cgagcgaatt gtctcaattc ttgaatggga taaaagttca       360
     gaacccgaac aacgattgga agccatttgt gcttccatga ttgaggcatg gggttataag       420
     gatttgttgt acgaaattag aaagttctat gcttgggttc ttgaacaggc cccatattct       480
     gagctggcac gcaatggaaa ggcaccttat ctggctgaaa ccgctctaag gcatttatat       540
     acaaattctg agataaggga tgatgagtta ttaaactata tcgaggcttt ccaatctgat       600
     attagttttg acgaggaaat ggtcgatgtg atttttcaat ctcaagaaac ttttaatgcc       660
     ggaactgaat tagctagatc gcagcaagca caaatgccag tgactccaag tcaggatgtg       720
     aatgtaggga cttccggaca gactgcacta atacaatcaa aaatgttttc aaagaaactg       780
     cgagttgtga aagctaaagg aaaaacaaca cttaatcttg aacatctctt gcattataaa       840
     ccaattcaag aagacttgtt caatacaaaa tctagtcaac agcaatttga taattggcac       900
     atgaaagtgc aagaagcata tgatgttgac gataagcaaa tggaaattct tatgaatgga       960
     ttgattgttt ggtgcattga aaacggaact tcttcggaac tgaaaggaac atggaggatg      1020
     gattttggag atcagcaagt cgaatatgat attcaacctt tgatacaaca cagtcagcca      1080
     acttttcgcc aaataatgag acattttagt aagatagctg aagcgtatat agctatgcga      1140
     aaccaagaag aacgctatat gccaaggtat gcgcttcaga ggggcctcac tgatattagt      1200
     ctagcacgat atggttttga tttctttgac acaacagcag ctactccgca acgggcacgg      1260
     gaggccgtta tgcaaatgaa agcagctgct gtgcgtggga aggaaacaag attattctca      1320
     cttgatggca atattagtgt aaacacagaa aacactgagc gacacactgt tgaggatgtc      1380
     actcaggata tgcactcact tcttggtgtg aggggtataa agtgagtaag tggggagctt      1440
     cttgtatctt atagataaat taaggtttta ttttatctat ctgtatccag gaatcctgta      1500
     ggattggcta cccgtgtggt tttgtcggtt gaagtgtgat tgtatcacct caaacaacgg      1560
     atttaattac acattcggta gggaattcta taaggagaca aaaaa                      1605
//