ID   EF213025; SV 1; linear; genomic RNA; STD; VRL; 2217 BP.
XX
AC   EF213025;
XX
DT   05-FEB-2007 (Rel. 90, Created)
DT   05-FEB-2007 (Rel. 90, Last updated, Version 1)
XX
DE   Cucumber mosaic virus strain CTL segment RNA3, complete sequence.
XX
KW   .
XX
OS   Cucumber mosaic virus (cucumber mosaic cucumovirus)
OC   Viruses; Riboviria; Bromoviridae; Cucumovirus.
XX
RN   [1]
RP   1-2217
RA   Chen Y., Zhang H., Chen J.;
RT   "The complete nucleotide sequence analysis of cucumber mosaic virus CTL
RT   strain";
RL   Unpublished.
XX
RN   [2]
RP   1-2217
RA   Chen Y., Zhang H., Chen J.;
RT   ;
RL   Submitted (10-JAN-2007) to the INSDC.
RL   Institute of Bioengineering, Zhejiang Sci-Tech University, Xiasha 2 Road,
RL   Hangzhou, Zhejiang 310018, China
XX
DR   MD5; 65bf3e810ed9f6161274478a481d6135.
DR   EuropePMC; PMC3550734; 23637513.
DR   EuropePMC; PMC3550809; 23730005.
DR   RFAM; RF01084; TLS-PK3.
XX
CC   GenBank Accession Numbers EF213023-EF213025 represent the complete
CC   genome of Cucumber mosaic virus strain CTL.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2217
FT                   /organism="Cucumber mosaic virus"
FT                   /segment="RNA3"
FT                   /host="Brassica chinensis"
FT                   /strain="CTL"
FT                   /serotype="IB"
FT                   /mol_type="genomic RNA"
FT                   /country="China"
FT                   /isolation_source="leaf"
FT                   /db_xref="taxon:12305"
FT   CDS             122..958
FT                   /codon_start=1
FT                   /product="3a"
FT                   /db_xref="InterPro:IPR000603"
FT                   /db_xref="UniProtKB/TrEMBL:A2TLJ0"
FT                   /protein_id="ABN05378.1"
FT                   /translation="MAFQGTSRTLTQQSSAATSDDLQKILFSPEAIKKMATECDLGRHH
FT                   WMRADNAISVRPLVPEVTHGRIASFFKSGYDAGELCSKGYMSVPQVLCAVTRTVSTDAE
FT                   GSLRIYLADLGDKELSPIDGQCVSLHNHDLPALVSFQPTYDCPMEIVGNRKRCFAVVIE
FT                   RHGYVGHTGATASVCSNWQARFSSKNNNYTHIAAGKTLVLPFNRLAEQTKPSAVARLLK
FT                   SQLNNIESSQYVLTNSKINQNARSESEENVESPPIVIGSSSASRSESFRPQVVNGL"
FT   CDS             1259..1915
FT                   /codon_start=1
FT                   /product="CP"
FT                   /db_xref="GOA:A2TLJ1"
FT                   /db_xref="InterPro:IPR000247"
FT                   /db_xref="InterPro:IPR023800"
FT                   /db_xref="InterPro:IPR037137"
FT                   /db_xref="UniProtKB/TrEMBL:A2TLJ1"
FT                   /protein_id="ABN05379.1"
FT                   /translation="MDKSESTSAGRNRRRRPRRGSRSASSSTDANFRVLSQQLSRLNKT
FT                   LAAGRPTINHPTFVGSERCKPGYTFTSITLKPPKIDRGSYYGKRLLLPDSVTEFDKKLV
FT                   SRIQIRVNPLPKFDSTVWVTVRKVPASSDLSVAAISAMFADGASPVLVYQYAASGVQAN
FT                   NKLLYDLSAMRADIGDMRKYAVLVYSKDDALETDELVLHVDVEHQRIPTSGVLPV"
XX
SQ   Sequence 2217 BP; 510 A; 526 C; 533 G; 648 T; 0 other;
     gtaatcttac cactgtgtgt gtgcgtgtgt gtgtgtgtcg cgtcgtgtcg agtcgtgttg        60
     tccgcacatt tgagtcgtgc tgtccgcaca ttttcttttc agtgtgttag attcccgagg       120
     catggctttc caaggtacca gtaggacttt aactcaacag tcctcagcgg ctacgtctga       180
     cgatcttcaa aagatattat ttagccctga agccattaag aaaatggcta ccgagtgtga       240
     cctaggccgg catcattgga tgcgcgctga taatgctatt tcagtccggc ccctcgttcc       300
     cgaagtaacc cacggtcgta ttgcttcctt ctttaagtct ggatatgatg ctggtgaatt       360
     gtgttctaaa ggatatatga gcgtccccca agtgttatgt gctgttactc gaacagtttc       420
     taccgatgct gaagggtctc tgagaattta cctagctgat ttaggcgaca aggagttatc       480
     tcctatagat gggcaatgcg tttcattaca taaccatgat cttcccgctt tggtgtcttt       540
     ccagccgacg tatgattgtc ctatggaaat tgttgggaat cgcaagcggt gttttgcagt       600
     cgttatcgaa agacatggtt atgttgggca taccggcgcc acagctagcg tgtgtagtaa       660
     ttggcaagca cggttttctt ctaagaataa caactacact catatcgcag ctgggaagac       720
     tctagtactg ccattcaaca gattagctga gcaaacgaaa ccgtcagccg tcgctcgcct       780
     gttgaagtcg caattgaaca acatagaatc ttcgcaatac gttttaacga attcgaagat       840
     caatcaaaat gcgcgcagtg agtccgagga aaatgttgag agccctccta tcgtaatcgg       900
     gagttcttcc gcgtcccgct ccgaatcctt cagaccgcag gtggttaacg gtctttagcg       960
     ctttcgttgc gtattagtat ataagtatgt gtgagtcttt acataatact atatctatag      1020
     tgtcctgtgt gagttgatac agtagacaac tgtgacgcga tgtcgtgttg agaagagagc      1080
     acatctggtt ctagtaaatc cacatcatag ctttgaggtt caattcctct tgctccctgt      1140
     tgggacccct tactttttca tggatgcttc tccacgagat tacgtttcgt ctacttatct      1200
     atagagtatt gtgctgtgtg ttttctcttg tgtgtttagt agacgtttga gtcgagtcat      1260
     ggacaaatcc gaatcaacca gtgccggtcg taaccgtcga cgtcgtccgc gtcgtggttc      1320
     ccgctccgcg tcttcctcca cggatgctaa ctttagagtc ctgtcgcaac agctttcgcg      1380
     acttaataag acgttagcag ctggtcgtcc aaccattaac cacccaacct ttgtgggtag      1440
     tgaacggtgt aaacctgggt acacgttcac atctatcacc ctgaaaccac cgaaaataga      1500
     ccgtgggtct tattatggta aaaggttgct acttcctgat tcggtcacgg agttcgataa      1560
     gaagcttgtt tcgcgcattc aaattcgagt taatcctttg ccgaaatttg attctaccgt      1620
     gtgggtgaca gtccgtaaag ttcctgcctc ctcggactta tccgttgccg ccatctctgc      1680
     tatgttcgcg gacggagcct caccggtact ggtttatcag tacgccgcat ccggagtcca      1740
     agccaataat aaattgttgt acgatctctc ggcgatgcgc gctgatattg gtgacatgcg      1800
     aaagtacgcc gttctcgtgt attcaaaaga cgatgctctt gagacggatg agctggtact      1860
     tcatgtcgac gttgagcacc aacgcattcc cacgtcaggg gtgctcccag tttgaactcg      1920
     tgttttccca gaaccctccc tccgattact gtggcgggag ctgagttggt agtgttacta      1980
     taaactgcct gaagtcacta aacgctttgc ggtgaacggg ttgtccatcc agcttacggc      2040
     taaaatggtc agtcatggag aaatccatgc cagtagactt acaagtctct gaggtgcctt      2100
     tgaaaccatc tcctaggttt cttcggaagg acttcggtcc gtgtaccgct agtacaagat      2160
     actagcttta gggtacgggc atccccccat ttaatggggg tctccaaaag gagacca         2217
//