ID EF213024; SV 1; linear; genomic RNA; STD; VRL; 3047 BP. XX AC EF213024; XX DT 05-FEB-2007 (Rel. 90, Created) DT 05-FEB-2007 (Rel. 90, Last updated, Version 1) XX DE Cucumber mosaic virus strain CTL segment RNA2, complete sequence. XX KW . XX OS Cucumber mosaic virus (cucumber mosaic cucumovirus) OC Viruses; Riboviria; Bromoviridae; Cucumovirus. XX RN [1] RP 1-3047 RA Chen Y., Zhang H., Chen J.; RT "The complete nucleotide sequence analysis of cucumber mosaic virus CTL RT strain"; RL Unpublished. XX RN [2] RP 1-3047 RA Chen Y., Zhang H., Chen J.; RT ; RL Submitted (10-JAN-2007) to the INSDC. RL Institute of Bioengineering, Zhejiang Sci-Tech University, Xiasha 2 Road, RL Hangzhou, Zhejiang 310018, China XX DR MD5; 838b58705ef741ecac8ed27f6ae5238c. DR RFAM; RF01084; TLS-PK3. XX CC GenBank Accession Numbers EF213023-EF213025 represent the complete CC genome of Cucumber mosaic virus strain CTL. XX FH Key Location/Qualifiers FH FT source 1..3047 FT /organism="Cucumber mosaic virus" FT /segment="RNA2" FT /host="Brassica chinensis" FT /strain="CTL" FT /serotype="IB" FT /mol_type="genomic RNA" FT /country="China" FT /isolation_source="leaf" FT /db_xref="taxon:12305" FT CDS 79..2655 FT /codon_start=1 FT /product="2a" FT /db_xref="GOA:A2TLI8" FT /db_xref="InterPro:IPR001788" FT /db_xref="InterPro:IPR007094" FT /db_xref="UniProtKB/TrEMBL:A2TLI8" FT /protein_id="ABN05376.1" FT /translation="MASPAPAFSLANLLNGTYGVDTPEEVERVRSEQREEAAAACRNYK FT PLPAVDVSESVTEDAHSLRIPDGAPSEEVSVEFVTYGAEDYLEKSDDELLVAFETMVKP FT MRIGQLWCPAFNKCSFISSIAMARALLLAPSTSNRTMKCFEDLVAAIYTKSDFYYDDEC FT EADDVQINISSRDVPGYSFEPWSRTSGFEPPPICEACDMIMYQCPCFDFNALKKSCAER FT TFADDYVIEGLDGVVDNATLLSNLGPFLVPVKCQYEKCPTPTVAIPPSLNRATDRVDIN FT LVQSICDSTLPTHSNYDDSFHQVFGESADYSIDLDHVRLRQSDLIAKIPDSGHMIPVLN FT TGSGHKRVGTTKEVLTAIKKRNADVPELGDSVNLSRLSKAVAERFFISYINGNSLATSN FT FVNVVSNFHDYMEKWKSSGLSYDDLPDLHAENLQFYDHMIKSDVKPVVSDTLNIDRPVP FT ATITYHKKGITSQFSPLFTALFERFQRCLRERIILPVGKISSLEMSGFDVKNKHCLEID FT LSKFDKSQGEFHLMIQEHILNGLGCPAPITKWWCDFHRFSYIRDRRAGVGMPISFQRRT FT GDAFTYFGNTIVTMAEFAWCYDTDQFEKLLFSGDDSLGFSVLPPVGDPSKFTTLFNMEA FT KVMEPAVPYICSKFLLSDEFGNTFSVPDPLREVQRLGTKKIPYSDNDEFLFAHFMSFVD FT RLKFLDRMTQSCIDQLSPFFELKYRKSGAEAALMLGAFKKYTANFQSYKELYFSDRRQC FT ELINSFSCVELRIERSSFIKQRKKKDGIERRRNDERRTPTGPHGGGEETETKVSQEEST FT GTMSQKSQREGAFKSQTVPLPTVLSSRWFGTDRDVPSRERGGIVRV" FT CDS 2414..2749 FT /codon_start=1 FT /product="2b" FT /db_xref="InterPro:IPR004946" FT /db_xref="UniProtKB/TrEMBL:A2TLI9" FT /protein_id="ABN05377.1" FT /translation="MELNEGAMTNVELQLARMVEAKRRRRRSHKKNRRERCHKSPSERA FT RSNLRLFRFLPFYQVDGSELIEMYRHESVAGLSESEAPCFTLPAEDDHDFDDTDWFAGN FT EWAEGAF" XX SQ Sequence 3047 BP; 760 A; 684 C; 721 G; 882 T; 0 other; gtttatttac aagagcgtac ggttcaaccc ctgcctcctc tgtaaaactc cctagacttc 60 ctagtttctt tctttcctat ggcttccccc gcccccgctt tctcattggc caatcttttg 120 aatggtactt acggtgtcga cactcccgag gaagtggaac gcgtgcgatc tgagcaacgc 180 gaagaggctg ctgcggcttg tcgtaattac aagcccctac ccgctgtgga tgtcagcgag 240 agtgtcacag aggacgcgca ttccctccga attccagacg gagctccctc tgaagaggtg 300 tctgttgagt ttgttactta tggtgctgaa gattaccttg aaaaatctga tgatgagctc 360 cttgtcgctt ttgagacgat ggtcaaaccc atgcgtatcg gacagttatg gtgccctgcg 420 tttaataaat gttcttttat ttccagcatt gctatggcta gagctttgct tttggcacct 480 agcacatcca accgaaccat gaagtgtttt gaagacctgg tcgcggctat ttacactaaa 540 tctgatttct actacgatga tgagtgtgaa gccgacgatg ttcagataaa tatctcgtct 600 cgcgatgtac ccggttattc tttcgaaccg tggtcccgaa cgtctggatt tgaaccaccg 660 cctatctgtg aggcgtgtga catgatcatg taccagtgcc cgtgttttga ttttaatgct 720 ttaaagaaat cgtgcgctga gaggactttc gctgacgatt atgttattga agggttagat 780 ggtgttgtcg acaatgcaac tttgttgtct aacttaggcc cattcttggt gcctgtgaag 840 tgccagtacg agaaatgtcc aacacccacc gtcgcgattc ctccgagttt aaatcgtgct 900 actgatcgtg ttgatattaa tttagttcaa tccatttgtg attccactct gcccacgcat 960 agcaattatg acgactcttt tcatcaggtg ttcggcgaaa gtgctgatta ctctattgat 1020 ctggatcatg ttagacttcg tcaatccgat ctcattgcga agattccaga ttcagggcat 1080 atgataccgg ttttgaatac cgggagtgga cacaagagag taggtacaac gaaggaggtt 1140 cttacagcaa tcaagaaacg aaatgctgat gttccagagc taggtgattc cgttaatctg 1200 tccaggttga gtaaggctgt agctgagaga tttttcatct cgtacattaa tggcaactct 1260 ctagcaacca gcaactttgt caatgtcgtt agcaacttcc acgattacat ggaaaaatgg 1320 aagtcttcag gcctctcgta tgatgatctc ccagatcttc acgctgagaa tttgcagttt 1380 tatgatcata tgataaaatc tgatgtcaag cctgttgtta gcgacacact gaacattgac 1440 agaccggttc cagctactat aacgtatcat aagaaaggta taacctccca gttctcaccg 1500 ttattcacag ctctgtttga gcgtttccag agatgccttc gagaacgtat tattcttcct 1560 gttggaaaga tttcatccct tgagatgtca ggatttgatg ttaagaacaa acactgtctc 1620 gagatcgact tgtccaaatt cgataagtct caaggtgaat ttcatttgat gattcaggaa 1680 catattttga atggtctagg gtgcccggct ccgataacta agtggtggtg tgatttccac 1740 agattctctt atattagaga ccgtagagcc ggtgttggaa tgcctatcag tttccagaga 1800 cgaactggtg atgcattcac ttatttcggt aacaccattg tcaccatggc tgaattcgca 1860 tggtgttatg acaccgacca attcgaaaag cttttattct caggcgatga ttctctagga 1920 ttttcagtgc ttccccctgt tggtgacccg agtaaattca caactctttt caacatggaa 1980 gctaaggtga tggagccagc agtaccatac atttgttcga aattcctact ctctgacgag 2040 ttcggtaata ctttttccgt tccagatcca ttgcgcgagg ttcagcggtt aggaacaaag 2100 aaaatcccct attctgacaa tgatgaattc ctgtttgctc acttcatgag ctttgttgat 2160 cgattgaagt ttttggaccg aatgactcag tcctgcatcg atcaactctc acccttcttc 2220 gagttgaagt acaggaagtc tggggcagag gctgccttaa tgctaggcgc ctttaagaaa 2280 tataccgcaa atttccagtc ctacaaagaa ctctactttt cggatcgtcg tcagtgcgaa 2340 ttgatcaatt cgtttagttg tgtagagttg aggattgagc gttcgagttt cattaagcag 2400 cgaaagaaga aagatggaat tgaacgaagg cgcaatgacg aacgtcgaac tccaactggc 2460 ccgcatggtg gaggcgaaga gacggagacg aaggtctcac aagaagaatc gacgggaacg 2520 atgtcacaaa agtcccagcg agagggcgcg ttcaaatctc agactgttcc gcttcctacc 2580 gttctatcaa gtagatggtt cggaactgat agagatgtac cgtcacgaga gcgtggcggg 2640 attgtccgag tctgaggccc cttgttttac gttaccagcg gaagatgacc atgattttga 2700 cgatacagat tggttcgctg gtaacgagtg ggcggaagga gcgttctgaa cccctccttc 2760 ctttctccct ccagttttct gaggcgggag ctgagttggc agtattgcta caaactgtct 2820 gaagtcacta aacgttttac ggtgaacggg ttgtccatcc agctaacggc taaaatggtc 2880 agtcgtggag aaatccacgc cggagactta caagtctctg aggtgccttt gaaaccatct 2940 cctaggtttc ttcggaagga cttcggtccg tgtacttcta gcacaagatg ctagttttag 3000 ggtacgggca tccccccact ttggtggggg tctctaaaag gagacca 3047 //