ID EF213023; SV 1; linear; genomic RNA; STD; VRL; 3357 BP. XX AC EF213023; XX DT 05-FEB-2007 (Rel. 90, Created) DT 05-FEB-2007 (Rel. 90, Last updated, Version 1) XX DE Cucumber mosaic virus strain CTL segment RNA1, complete sequence. XX KW . XX OS Cucumber mosaic virus (cucumber mosaic cucumovirus) OC Viruses; Riboviria; Bromoviridae; Cucumovirus. XX RN [1] RP 1-3357 RA Chen Y., Zhang H., Chen J.; RT "The complete nucleotide sequence analysis of cucumber mosaic virus CTL RT strain"; RL Unpublished. XX RN [2] RP 1-3357 RA Chen Y., Zhang H., Chen J.; RT ; RL Submitted (10-JAN-2007) to the INSDC. RL Institute of Bioengineering, Zhejiang Sci-Tech University, Xiasha 2 Road, RL Hangzhou, Zhejiang 310018, China XX DR MD5; 80903405f9d61b6c0dfaf3eaede11243. DR RFAM; RF01084; TLS-PK3. XX CC GenBank Accession Numbers EF213023-EF213025 represent the complete CC genome of Cucumber mosaic virus strain CTL. XX FH Key Location/Qualifiers FH FT source 1..3357 FT /organism="Cucumber mosaic virus" FT /segment="RNA1" FT /host="Brassica chinensis" FT /strain="CTL" FT /serotype="IB" FT /mol_type="genomic RNA" FT /country="China" FT /isolation_source="leaf" FT /db_xref="taxon:12305" FT CDS 95..3076 FT /codon_start=1 FT /product="1a" FT /db_xref="GOA:A2TLI7" FT /db_xref="InterPro:IPR002588" FT /db_xref="InterPro:IPR021002" FT /db_xref="InterPro:IPR022184" FT /db_xref="InterPro:IPR027351" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/TrEMBL:A2TLI7" FT /protein_id="ABN05375.1" FT /translation="MATSSFNISELVASHGDKGLLANALVDKTAHEQLEEQLQHQRRGR FT KVYIRNVLSVKDSEVIRNRYGGKYDLHLTQQEFAPHGLAGALRLCETLDCLDSFPSSGL FT RQDLVLDFGGSWVTHYLRGHNVHCCSPCLGIRDKMRHAERLMNMRKIILNDPQQFDGRQ FT PDFCTHPAADCKVQAHFAISIHGGYDMGFRGLCEAMHAHGTTILKGTMMFDGAMMFDDQ FT GIIPELNCQWRKIRNAFSETEDVTPLSGKIKSTVFTRVRKFKTLVAFDFINESTMSYVH FT DWENIKSFLTDQTYSYKGMTYGIERCVINAGIMTYKIIGVPGMCPPELIRHCIWFPSIK FT DYVGLKIPASQDLVEWKTVRILASTLRETEEIAMRCYNDKKAWMEQFKVILGVLSAKSS FT TIVINGMSMQSGERIDINDYHYTGFAILLHTKMKYEQLGKMYDMWNASSISKWFAALTR FT PLRVFFSSVVHALFPTLRPREEKEFLIKLSTFVTFNEECSFDGGEEWDVISSAAFVATQ FT AVTDGMILAAQKAEKLAEKLAQPVIEVSDSPEAPSPTLDDTADVCGREQEVSELDSLSV FT QTRSPITRIAERATAMLEYAAYEKQLHDTTVSNLKRIWNMAGGDDKKNSLEGNLKFVFD FT TYFTVDPMVNVRFSTGRWMRPVPEGITYSVGYNERGLGPKSDGELYIVNSECVISNSDS FT LSAVTRSLQAPTGTISQVDGVAGCGKTTAIKSIFEPSTDMIVTANKKSAQDVRMALFKS FT SDSKEACTFVRTADSVLLNECPTVSRVLVDEVVLLHFGQLRAVMSKLKAVRAICFGDSE FT QIAFSSRDASFDMRFSKIIPDETSDADTTFRSPQDVVPLVRLMATKALPKGTRSKYTKW FT VSQSKVKRSVTSRAVASVTLVDLDESRFYVTMTQADKASLISRAKEMNLPKTFWNERIK FT TVHESQGISEDHVTLVRLKSTKCDLFKKFSYCLVALTRHKVTFRYEYCGTLNGDLIAEC FT VARV" XX SQ Sequence 3357 BP; 839 A; 732 C; 829 G; 957 T; 0 other; gtttatttac aagagcgtac ggttcaatcc ctgcctcccc tgtaaaacta ccctttgaaa 60 acctctcttt tctaatcttt tctctgtaat tcctatggcg acgtcctcgt tcaacatcag 120 tgaattggta gcctcccacg gcgataaagg actgctcgcg aacgccctcg ttgataagac 180 agctcatgag cagctcgagg agcaattaca gcatcaacgt agaggccgta aggtctacat 240 tcggaatgtt ctgagtgtaa aggattctga ggtcatccgg aatcggtatg gaggaaagta 300 cgacctccat cttacccagc aggagtttgc tccccacggc ctagctggtg ccctccgctt 360 gtgtgaaact ctcgattgtc tagactcttt cccttcatca ggtctgcggc aggacctcgt 420 cttagacttc ggaggaagtt gggtcacaca ttacctccgc ggacataacg tacactgttg 480 ttccccttgt ttgggtatcc gcgacaaaat gcgccacgcg gaacgtttaa tgaacatgcg 540 caagatcatc ttgaacgatc cacaacagtt cgatggtcga cagccggatt tttgcactca 600 tcctgctgct gattgcaaag tacaagccca ctttgctata tctattcatg gaggttatga 660 tatgggcttc agaggattat gtgaagcaat gcatgctcac ggaaccacta ttttgaaggg 720 aacgatgatg ttcgatggtg caatgatgtt tgacgaccaa ggcattatac ctgagcttaa 780 ttgccagtgg aggaagatta ggaatgcttt ctctgaaact gaagacgtca cacctttgtc 840 tggtaaaatt aaatccacag tattcacccg cgtgcgtaag ttcaagactt tggtagcttt 900 tgatttcatt aatgagtcta ccatgtccta tgttcatgat tgggagaata taaaatcgtt 960 tttgacggac cagacgtact cgtataaagg gatgacttat ggcatcgaac gttgtgtcat 1020 taatgcgggt atcatgacgt ataagattat cggtgtgcct gggatgtgcc cacccgaact 1080 cattcgacat tgtatttggt tcccctctat taaggactat gttggtctaa agattcccgc 1140 gtcgcaggac ttggttgagt ggaaaacagt gcgcatttta gcgtcaacat tacgtgagac 1200 tgaagagatt gccatgaggt gttataatga taagaaggct tggatggagc agtttaaggt 1260 tatcttaggt gttctttccg ctaagtcatc caccattgtt atcaatggta tgtccatgca 1320 atctggcgaa cggatcgata tcaatgatta tcattataca gggtttgcca ttcttcttca 1380 cacaaaaatg aagtatgaac agttagggaa gatgtatgat atgtggaatg cttcgagtat 1440 ctcgaaatgg ttcgcagcgt tgactcgtcc gctgcgtgtg ttcttctcta gcgttgttca 1500 cgcgctgttc ccgactttga gaccccgcga ggaaaaagaa ttcctgatta agctctccac 1560 ctttgtgact ttcaacgaag agtgctcgtt tgatggtgga gaggaatggg acgtgatatc 1620 atctgctgca ttcgttgcta cgcaggctgt taccgatggg atgattttgg ccgcacagaa 1680 ggccgagaag cttgctgaga agcttgcgca acccgtgatt gaggtatcgg acagtcctga 1740 agcgccatct ccaacgcttg atgatactgc tgatgtttgt ggaagggagc aagaagtttc 1800 ggaacttgac tccctgtcag ttcagacacg ttcccccatc actagaattg ctgaaagggc 1860 tactgctatg ttagagtatg ccgcttatga gaaacagttg cacgacacca cagtgtctaa 1920 cttgaaacgc atttggaata tggcgggtgg tgatgacaag aaaaattccc tcgaaggcaa 1980 cttgaagttt gtttttgaca cgtattttac cgttgatcct atggtgaatg ttcgtttctc 2040 cacaggtcgg tggatgcgtc ctgtgcctga agggattact tattctgtcg gttacaatga 2100 acgcggttta ggtccgaaat ctgatgggga gctttacatt gtcaatagtg agtgtgtgat 2160 cagtaatagc gattctttgt ctgctgtcac gcgctcacta caagctccga ctggcaccat 2220 tagtcaagtt gatggggtcg ccgggtgcgg gaaaaccacg gcaattaaat caatttttga 2280 gccgtccaca gatatgatcg ttaccgctaa caagaaatcc gcccaagacg tgcgtatggc 2340 actttttaaa tcgtcggact ccaaagaagc ttgcactttc gtccgaacag ccgactctgt 2400 tttgcttaat gaatgtccga ccgtgagtag agttttggtt gatgaggtcg tgttgctgca 2460 ctttggtcaa ttacgtgccg tcatgtccaa actgaaggct gtgagagcca tatgtttcgg 2520 ggattcagag cagattgcct tttcctctcg agatgcctcg tttgacatgc gtttctctaa 2580 aatcattcct gatgaaacta gtgatgcgga caccacattc cgtagcccac aagacgtagt 2640 gccgcttgtg cgtttgatgg ctacgaaggc ccttccgaaa ggaacccgtt caaagtatac 2700 gaagtgggtt tctcaatcta aagtgaagag atctgttaca tctcgggctg ttgcaagtgt 2760 gacgttggtt gatttggatg aatctagatt ttacgtcacg atgacacaag ctgataaagc 2820 ttcactgatt tcaagggcga aagagatgaa cttaccgaag actttctgga atgaaaggat 2880 caaaaccgtg catgaatctc aaggcatttc tgaggatcac gttactttgg taagattaaa 2940 gagcacaaag tgtgacctgt ttaagaagtt ttcttattgt cttgtcgctt taaccaggca 3000 taaggtcacc ttccgctacg agtattgtgg tacattaaac ggcgatttaa tcgccgagtg 3060 tgttgctcgt gtttagcggt cttccctcct tcgggcggga tctgagttgg cggtaatcta 3120 caaaccgtct gaagtcacta aacgctttgc ggtgaacggg ttgtccatcc agcttacggc 3180 taaaatggtc agtcgtggag aaatccacgc cagtagactt acaagtctct gaggtgcctt 3240 tgaaaccatc tcctaggttt cttcggaagg acttcggtcc gtgtaccgct agtacaagat 3300 actagcttta gggtacgggc atccccccat ttaatggggg tctctaaaag gagacca 3357 //