Dbfetch
ID EF201809; SV 1; circular; genomic DNA; STD; VRL; 2753 BP. XX AC EF201809; XX DT 30-JAN-2007 (Rel. 90, Created) DT 30-JAN-2007 (Rel. 90, Last updated, Version 1) XX DE Watermelon chlorotic stunt virus isolate IL segment DNA A, complete DE sequence. XX KW . XX OS Watermelon chlorotic stunt virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2753 RA Abudy A., Lapidot M.; RT "First report of watermelon chlorotic stunt virus (WmCSV) in Israel"; RL Unpublished. XX RN [2] RP 1-2753 RA Abudy A., Lapidot M.; RT ; RL Submitted (28-DEC-2006) to the INSDC. RL Vegetable Research, Volcani Center, ARO, P.O. Box 6, Beit Dagan 50250, RL Israel XX DR MD5; c00ae3a828213d0ad9bb93932e6cef3b. XX FH Key Location/Qualifiers FH FT source 1..2753 FT /organism="Watermelon chlorotic stunt virus" FT /segment="DNA A" FT /isolate="IL" FT /mol_type="genomic DNA" FT /country="Israel" FT /db_xref="taxon:35341" FT gene 156..515 FT /gene="AV2" FT CDS 156..515 FT /codon_start=1 FT /gene="AV2" FT /product="AV2 protein" FT /db_xref="GOA:A2THD6" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:A2THD6" FT /protein_id="ABM91594.1" FT /translation="MWDPLLNDFPESVHGFRCMLAVKYLQAVESTYEPNTLGHELIRDL FT ILVLRARDYGEANRRYSHFHSRFEGSSKTELRQPLHEPCSCPHCPRHKQASTMGQQAHV FT SKAQDVQDVSKPRCP" FT gene complement(220..987) FT /gene="AC5" FT CDS complement(220..987) FT /codon_start=1 FT /gene="AC5" FT /product="AC5 protein" FT /db_xref="InterPro:IPR006892" FT /db_xref="InterPro:IPR013671" FT /db_xref="UniProtKB/TrEMBL:A2THD7" FT /protein_id="ABM91593.1" FT /translation="MILILRSLLVVVYHMIVHTIEAFYQRLLLHPRGASDHGGMKLSHN FT LETIAKIVLNCRSAGLVVEHIKNLSEVHWTGPIWTTITNKKEHDLIRMILFFYVLIHPD FT LAKNVYRLHTKPFSDTMSDSTPPSNITDPPDDTGVFNVVSLFVRLNFARAFAALRDIWA FT SIHPVHPGLSIHGPVGPLSTLACDEDSGGKSTAHVGAVEVQFSTNLRNGSGNENISCSL FT RHNHGPGGQESDRGSIRGPKYWARRSIQRPAST" FT gene 316..1095 FT /gene="AV1" FT CDS 316..1092 FT /codon_start=1 FT /gene="AV1" FT /product="capsid protein" FT /db_xref="GOA:A2THD8" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:A2THD8" FT /protein_id="ABM91588.1" FT /translation="MAKRTGDILISTPVSKVRRKLNFDSPYMSRALAPTVLVTSKRRQW FT ANRPMYRKPRMYRMYRSPDVPKGCEGPCKVQSYEQRDDVKHTGIVRGVSDVTRGSGITH FT RVGKRFCVKSIYILGKIWMDENIKKQNHTNQVMFFLVRDRRPYGSSPMDFGQVFNMFDN FT EPSTATVKNDLRDRFQVMRKFHATVVGGPSGMKEQALVKRFYRVYNHVVYNHQETAKYE FT NHTENAMLLYMACTHASNPVYATLKIRIYFYDSVTN" FT gene complement(1089..1493) FT /gene="AC3" FT CDS complement(1089..1493) FT /codon_start=1 FT /gene="AC3" FT /product="replication enhancer protein" FT /db_xref="GOA:A2THD9" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:A2THD9" FT /protein_id="ABM91591.1" FT /translation="MDSRTGEYITADQAWNGVFTWKINNPLYFTIIDHHQRPFLCRHDI FT IHMQIRFYHNLRRALGIHKAFLNFRIWTTLRPQTGRFLRVFRTQVLKYLDMLGVISLNL FT VVRAVSHVLENVLVGTIDVQENHVIKFDLY" FT gene complement(1234..1641) FT /gene="AC2" FT CDS complement(1234..1641) FT /codon_start=1 FT /gene="AC2" FT /product="transcription activator protein" FT /db_xref="GOA:A2THE0" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:A2THE0" FT /protein_id="ABM91590.1" FT /translation="MPNSSSSQNLSSQPSIKIRHRLAKKKTIRRRRIDLKCGCSYYLHI FT SCQNHGFSHRGIHYCGSSMEWRVYLEDKQPPIFHDNRSPPTPLSLPSRHNTHANTILPQ FT PSEGVGDSQSFPELPNLDDFTASDWSFLKGI" FT gene complement(1541..2626) FT /gene="AC1" FT CDS complement(1541..2626) FT /codon_start=1 FT /gene="AC1" FT /product="replicase" FT /db_xref="GOA:A2THE1" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:A2THE1" FT /protein_id="ABM91589.1" FT /translation="MRPPRFRIQAKNIFLTYPRCSLSKEELLSFLVGLSLPSNLKYVKV FT CRELHQNGEPHLHVLLQFAGKITITDNRLFDHVHPSRSACFHPNIQSAKSSTDVKSYLD FT KDGDTVEWGKFQIDGRSARGGQQTANDAYATALNMSNKGEAMSVIKELAPKDFVLHYHN FT IKSNLDRIFEEPVAPFVCPFPMSSFTLLPPELVDWASTNVCSSAARPWRPKSIVVEGES FT RTGKTMWARSLGPHNYLCGHLDLSPKIYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDWQ FT SNTKYGKPIQIKGGIPTIFLCNPGPSSSYKEFLEEEKNYALKEWADKNAEFVFLTEPLF FT STEHQDQTQTRQKEDDSTTTH" FT gene complement(2329..2472) FT /gene="AC4" FT CDS complement(2329..2472) FT /codon_start=1 FT /gene="AC4" FT /product="AC4 protein" FT /db_xref="UniProtKB/TrEMBL:A2THE2" FT /protein_id="ABM91592.1" FT /translation="MGNLISMCSCSSPERSPSQTIASSIMYTQAVAPVSTPTYKALSPV FT QT" XX SQ Sequence 2753 BP; 706 A; 625 C; 684 G; 738 T; 0 other; accggatgcc cgcggagccc aaaagatgac cccacaggac acgtgcacca ataaaattgc 60 gtgctttgag gtaagttagc tggaaatggg gttttgaaag cgacaagtca tacgagtcgt 120 atttatactg ctgctgcgga tcaacttttg tcagtatgtg ggatccattg cttaatgact 180 ttcccgagtc ggttcacggc tttcggtgta tgctagctgt caagtacttg caggccgttg 240 aatcgaccta cgagcccaat actttgggcc acgaattgat ccgcgatctg attcttgtcc 300 tccgggcccg tgattatggc gaagcgaaca ggagatattc tcatttccac tcccgtttcg 360 aaggttcgtc gaaaactgaa cttcgacagc ccctacatga gccgtgctct tgcccccact 420 gtcctcgtca caagcaagcg tcgacaatgg gccaacaggc ccatgtatcg aaagcccagg 480 atgtacagga tgtatcgaag cccagatgtc cctaagggct gcgaaggccc gtgcaaagtt 540 cagtcgtacg aacaacgaga cgacgttaaa cacaccggta tcgtccgggg ggtcagtgat 600 gttactaggg ggagtggaat cactcatcgt gtcggaaaaa ggttttgtgt gaagtctata 660 tacattcttg gcaagatctg gatggatgag aacataaaaa aacaaaatca tacgaatcag 720 gtcatgttct ttcttgttcg tgatcgtcgt ccatatgggt ccagtccaat ggacttcgga 780 caggttttta atatgttcga caacgagccc agcactgcga cagttaagaa cgatcttcgc 840 gatcgtttcc aagttatgcg aaagtttcat gccaccgtgg tcggaggccc ctctgggatg 900 aaggagcagg cgctggtaaa acgcttctat cgtgtgtaca atcatgtggt atacaaccac 960 caagagactg cgaagtatga gaatcatact gagaatgcga tgttattgta tatggcgtgt 1020 acacacgcat cgaatcctgt gtatgcaaca ttgaaaattc gtatatactt ttatgactca 1080 gttacgaatt aataaagatc gaattttatt acgtgatttt cttgtacatc gattgtccca 1140 acaaggacat tttccaatac atgacttacg gccctaacaa ccaaatttag actaattaca 1200 cctaacatat cgaggtattt tagaacctgc gttctaaata cccttaagaa acgaccagtc 1260 tgaggccgta aagtcgtcca gattcggaag ttcaggaaag ctttgtgaat ccccaacgcc 1320 ctccgaaggt tgtggtagaa tcgtatttgc atgtgtatta tgtcgtgacg gcaaagaaag 1380 gggcgttggt ggtgatctat tatcgtgaaa tatagggggt tgtttatctt ccaggtaaac 1440 acgccattcc atgcttgatc cgcagtaatg tattccccgg tgcgagaatc catgattctg 1500 gcacgagata tgcaggtaat atgagcaacc gcactttaga tcaatgcgtc gtcgtcgaat 1560 cgtcttcttt ttggcgagtc tgtgtctgat cttgatgctc ggttgagaag agaggttctg 1620 tgaggaagac gaattcggca ttcttgtccg cccactcttt tagtgcatag ttcttctcct 1680 cctctagaaa ctctttatac gaagaagatg ggcccggatt gcaaaggaag atagtgggaa 1740 ttccgccttt aatttgaatc ggctttccgt atttcgtgtt gctttgccaa tcacgctggg 1800 cccccatgaa ctctttgaag tgctttagat aatgcgggtc gacgtcatca atgacgttgt 1860 accacgcatc gttgctgtat atctttggac tcaggtcaag gtgaccacac aggtaattat 1920 gtggtcctaa tgatcgggcc cacatcgtct ttcccgtacg actctcaccc tctaccacga 1980 tactcttagg tctccacggc cgcgcagcgg aagagcaaac gttcgttgat gcccaatcaa 2040 cgagctcagg cggtagcaac gtgaaagacg acatcggaaa aggacaaacg aaaggagcca 2100 caggctcttc gaagattcta tccaaatttg acttgatatt gtggtaatga aggacgaagt 2160 ccttcggtgc gagctccttg atcacagaca tagcctcccc tttattactc atgttaagcg 2220 ccgtggcgta ggcgtcgtta gctgtctgtt gtccacccct tgcagatcga ccgtcgattt 2280 gaaacttgcc ccactcgacg gtgtcgccgt ccttgtccag gtaagacttc acgtctgtac 2340 tggacttagc gctttgtatg ttggggtgga aacaggcgct acggcttggg tgtacatgat 2400 cgaagaggcg attgtctgtg atggtgatct ttccggcgaa ctgcaggagc acatggagat 2460 gaggttcccc attctggtgc agttctctgc acaccttgac gtattttagg ttcgacggaa 2520 gggagaggcc gactaaaaag gaaagtagct cttctttgga tagagagcac ctgggatatg 2580 tgaggaaaat gtttttcgct tgtattctaa aacggggagg cctcatgttg accagtcaat 2640 tggagacacc ccccagatca ctaacccctg tatattggag actggagaca atatatagaa 2700 gtagtaagag gtactactag gattttgaca cgtagcgggc atcctataat att 2753 //