ID   EF200110; SV 1; linear; genomic RNA; STD; VRL; 840 BP.
XX
AC   EF200110;
XX
DT   15-JAN-2007 (Rel. 90, Created)
DT   15-JAN-2007 (Rel. 90, Last updated, Version 1)
XX
DE   Citrus tristeza virus isolate NS25 CP gene, partial cds; P18 gene, complete
DE   cds; and P13 gene, partial cds.
XX
KW   .
XX
OS   Citrus tristeza virus
OC   Viruses; Riboviria; Closteroviridae; Closterovirus.
XX
RN   [1]
RP   1-840
RA   Hilf M.E.;
RT   "Discovery of New Viral Genotypes of Citrus Tristeza Virus with
RT   Overlapping, Degenerate Primers";
RL   Unpublished.
XX
RN   [2]
RP   1-840
RA   Hilf M.E.;
RT   ;
RL   Submitted (27-DEC-2006) to the INSDC.
RL   USDA-ARS-USHRL, 2001 S. Rock Road, Fort Pierce, FL 34945, USA
XX
DR   MD5; 9041450a9946bf63a3b93c1fb6add65e.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..840
FT                   /organism="Citrus tristeza virus"
FT                   /lab_host="sweet orange"
FT                   /isolate="NS25"
FT                   /mol_type="genomic RNA"
FT                   /country="New Zealand"
FT                   /db_xref="taxon:12162"
FT   CDS             <1..84
FT                   /codon_start=1
FT                   /product="CP"
FT                   /note="major capsid protein"
FT                   /db_xref="UniProtKB/TrEMBL:A2ID23"
FT                   /protein_id="ABM60780.1"
FT                   /translation="KEQLLKKRGADEVVVTNVRQLGKFNTR"
FT   CDS             50..553
FT                   /codon_start=1
FT                   /product="P18"
FT                   /db_xref="InterPro:IPR008452"
FT                   /db_xref="UniProtKB/TrEMBL:A2ID24"
FT                   /protein_id="ABM60781.1"
FT                   /translation="MSGSLGNLTHVDLLRSDSRFVSGWWSFIVNVGDIIVRFALHVPSE
FT                   DVLNSFSAISNCTIIADGSALLKDNTVVDRLESMNPLAYLLKLAKTTTTICFTMSNKVL
FT                   FGTTKSEPLICLAITSDRVLFKVIMGTNVDDSRCGCSIWFYNNGMFQNGLTRCNNLVAL
FT                   FSAT"
FT   CDS             587..>840
FT                   /codon_start=1
FT                   /product="P13"
FT                   /db_xref="InterPro:IPR009692"
FT                   /db_xref="UniProtKB/TrEMBL:A2ID25"
FT                   /protein_id="ABM60782.1"
FT                   /translation="MSIRRVWLKVMAVITVLWYGKEPSISEGYNALMNDDFKFIDTHFS
FT                   NVSYAKKCYELANFDLDFLRIVVIPLSGGAVNESRADRA"
XX
SQ   Sequence 840 BP; 218 A; 140 C; 200 G; 282 T; 0 other;
     aaagaacaat tgttgaagaa gcgaggggct gatgaagtcg tagttactaa tgtcaggcag        60
     cttgggaaat ttaacacacg ttgatctatt gcgttctgat tcccggtttg tatcgggatg       120
     gtggagtttc atcgtgaacg tgggtgatat aatcgttcgg tttgcgttac acgttcctag       180
     tgaagatgtg ctgaacagct tttcagctat atcgaattgt acgatcatag cggacggtag       240
     tgctttacta aaagacaaca ccgtggttga ccgtttagag agcatgaacc ctttggctta       300
     tttgttaaaa ttagcgaaaa cgactactac tatttgtttt actatgtcta ataaggttct       360
     ttttggtact actaaatccg aaccgcttat ttgtttagct attacatcgg accgagtttt       420
     attcaaagtt attatgggta ctaacgttga tgattctcga tgtggctgca gtatttggtt       480
     ttacaacaat gggatgtttc aaaatgggtt gacccgttgt aataatctcg tcgctttgtt       540
     tagcgcgact tagacacgaa gtgaccgttc gggtttaatt gctgcaatga gtattcgacg       600
     tgtgtggtta aaggtaatgg ctgtaattac ggtattgtgg tatggtaaag aaccttccat       660
     tagcgaaggt tacaacgctc ttatgaatga tgactttaag tttatcgata cgcatttttc       720
     aaacgtctct tatgctaaga aatgttacga attggctaat ttcgatttag actttctacg       780
     catcgttgtc attcccctaa gtggtggtgc ggtgaatgaa tcgcgtgcag atcgcgctaa       840
//