ID   EF200109; SV 1; linear; genomic RNA; STD; VRL; 840 BP.
XX
AC   EF200109;
XX
DT   15-JAN-2007 (Rel. 90, Created)
DT   15-JAN-2007 (Rel. 90, Last updated, Version 1)
XX
DE   Citrus tristeza virus isolate T3 CP gene, partial cds; P18 gene, complete
DE   cds; and P13 gene, partial cds.
XX
KW   .
XX
OS   Citrus tristeza virus
OC   Viruses; Riboviria; Closteroviridae; Closterovirus.
XX
RN   [1]
RP   1-840
RA   Hilf M.E.;
RT   "Discovery of New Viral Genotypes of Citrus Tristeza Virus with
RT   Overlapping, Degenerate Primers";
RL   Unpublished.
XX
RN   [2]
RP   1-840
RA   Hilf M.E.;
RT   ;
RL   Submitted (27-DEC-2006) to the INSDC.
RL   USDA-ARS-USHRL, 2001 S. Rock Road, Fort Pierce, FL 34945, USA
XX
DR   MD5; 499ee45af238122bd316b632038ab2ca.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..840
FT                   /organism="Citrus tristeza virus"
FT                   /lab_host="sweet orange"
FT                   /isolate="T3"
FT                   /mol_type="genomic RNA"
FT                   /country="USA"
FT                   /db_xref="taxon:12162"
FT   CDS             <1..84
FT                   /codon_start=1
FT                   /product="CP"
FT                   /note="major capsid protein"
FT                   /db_xref="UniProtKB/TrEMBL:A2ID20"
FT                   /protein_id="ABM60777.1"
FT                   /translation="KEQLLKKRGADEVVVTNVRQLGKFNTR"
FT   CDS             50..553
FT                   /codon_start=1
FT                   /product="P18"
FT                   /db_xref="InterPro:IPR008452"
FT                   /db_xref="UniProtKB/TrEMBL:A2ID21"
FT                   /protein_id="ABM60778.1"
FT                   /translation="MSGSLGNLTHVDLLRSDSRFLSGWWSFIVNVGDIIVRFALHVPSE
FT                   DVLNSFSAISNCTIIADGSALLKDNTVVDRLEGLNPLAYLLKLARTTTTICFTMSNKVL
FT                   FCTTKSEPLSCLAVTSDRVLFKVIMGTNVDDSRCGCSIWFYDNGTFQNGLTRCNNLVAL
FT                   FSAT"
FT   CDS             587..>840
FT                   /codon_start=1
FT                   /product="P13"
FT                   /db_xref="InterPro:IPR009692"
FT                   /db_xref="UniProtKB/TrEMBL:A2ID22"
FT                   /protein_id="ABM60779.1"
FT                   /translation="MSIRRVWLKVVAVITVLWYGKEPSISEGYNALMNDDFKFIDTHFS
FT                   NVSYAKKCYELANFDLDFLRIVIIPLSGGTANESRADRT"
XX
SQ   Sequence 840 BP; 213 A; 145 C; 201 G; 281 T; 0 other;
     aaggaacaat tgttgaagaa gcgaggggct gatgaagtcg tagttactaa tgtcaggcag        60
     cttgggaaat ttaacacacg ttgatctatt gcgttctgat tcccggtttc tatcgggatg       120
     gtggagtttc attgttaacg tgggtgacat aatcgtccgg tttgcgttac atgttcctag       180
     tgaagatgtg ctgaatagtt tttcggctat atcgaattgc acaatcatag cagacggtag       240
     tgccttacta aaagacaaca ccgtcgttga ccgtttagaa ggcttgaatc ctttggctta       300
     tttgttaaag ttagcgagaa cgactactac tatttgtttt actatgtcta ataaggttct       360
     tttttgtact actaaatccg aaccacttag ttgtttagct gtcacatcgg atcgagtttt       420
     attcaaagtt attatgggta ctaacgttga tgattctcga tgcggctgca gtatttggtt       480
     ttacgacaat gggacgtttc aaaacgggtt gacccgttgt aacaatctcg tcgctttgtt       540
     tagcgcgact tagacacgaa gtgaccgttc gggtttaaat gctgcaatga gtattcgacg       600
     cgtgtggtta aaggttgtgg ccgtgattac ggtattgtgg tacggtaaag agccttcgat       660
     tagtgaaggt tacaatgctc ttatgaatga tgactttaag tttatcgata cgcatttttc       720
     aaacgtttct tatgctaaga aatgttacga attagctaac ttcgatttag actttctacg       780
     catcgttatc attcccttga gtggtggtac ggcgaatgaa tcgcgtgctg atcgcactaa       840
//