ID EF194765; SV 1; linear; genomic DNA; STD; VRL; 2763 BP. XX AC EF194765; XX DT 01-JAN-2008 (Rel. 94, Created) DT 01-JAN-2008 (Rel. 94, Last updated, Version 1) XX DE Tomato leaf curl Joydebpur virus-[Kalyani] from chili segment DNA-A, DE complete sequence. XX KW . XX OS Tomato leaf curl Joydebpur virus-[Kalyani] OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2763 RA Chattopadhyay B., Singh A.K., Hazra P., Sarin N.B., Chakraborty S.; RT "First report of occurence of Tomato leaf curl Joydevpur virus infecting RT tomato in India"; RL Unpublished. XX RN [2] RP 1-2763 RA Chattopadhyay B., Singh A.K., Hazra P., Sarin N.B., Chakraborty S.; RT ; RL Submitted (21-DEC-2006) to the INSDC. RL School of Life Sciences, Jawaharlal Nehru University, New Delhi, Delhi 110 RL 067, India XX DR MD5; 353bff9308f741b1a7e090c0a087323c. XX FH Key Location/Qualifiers FH FT source 1..2763 FT /organism="Tomato leaf curl Joydebpur virus-[Kalyani]" FT /segment="DNA-A" FT /host="chili" FT /mol_type="genomic DNA" FT /country="India:Kalyani, West Bengal" FT /db_xref="taxon:436289" FT gene 142..507 FT /gene="AV2" FT CDS 142..507 FT /codon_start=1 FT /gene="AV2" FT /product="pre-coat protein" FT /note="may help in viral movement" FT /db_xref="GOA:A9XEJ6" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:A9XEJ6" FT /protein_id="ABP93357.1" FT /translation="MWDPLVNEFPETVHGFRCMLAVKYLQLVEKTYSPDTLGYDLIRDL FT ISVIRARNYVEATSRYNHFHARLEGTPPSQLRQPILQPCFCPHCPRHQSKSMGEQAHEQ FT EAQDVQDVQKPRCAEGM" FT gene complement(280..570) FT /gene="AC5" FT CDS complement(280..570) FT /codon_start=1 FT /gene="AC5" FT /product="AC5" FT /db_xref="GOA:A9XEJ7" FT /db_xref="UniProtKB/TrEMBL:A9XEJ7" FT /protein_id="ABP93359.1" FT /translation="MTLPMCWTSCRDSNDWALHGPSHPLGTSGLLYILYILGFLFMGLF FT AHAFALVTRTMGAEARLEYGLSKLRRRRTFEAGVEMIISAGRFDIISGPDD" FT gene 302..1072 FT /gene="AV1" FT CDS 302..1072 FT /codon_start=1 FT /gene="AV1" FT /product="coat protein" FT /note="required for encapsidation and vector transmission" FT /db_xref="GOA:A9XEJ8" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:A9XEJ8" FT /protein_id="ABP93354.1" FT /translation="MSKRPADIIISTPASKVRRRLNFDSPYSSRASAPIVRVTKAKAWA FT NRPMNRKPRMYRMYRSPDVPRGCEGPCKAQSFESRHDVQHIGKVMCVSDVTRGTGLTHR FT VGKRFCVKSVYVLGKIWMDENIKTKNHTNSVMFFLVRDRRPVDKPQDFGEVFNMFDNEP FT STATVKNVHRDRYQVLRKWHATVTGGQYASKEQALVKKFIRVNNYVVYNQQEAGKYENH FT SENALMLYMACTHASNPVYATLKIRIYFYDSVTN" FT gene complement(1075..1479) FT /gene="AC3" FT CDS complement(1075..1479) FT /codon_start=1 FT /gene="AC3" FT /product="replication enhancer protein" FT /note="enhances efficiency of geminiviral replication; REn" FT /db_xref="GOA:A9XEJ9" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:A9XEJ9" FT /protein_id="ABP93356.1" FT /translation="MDSRTGELITAAQAENGVFIWEITNPLYFKITEHHNRPFLRNRDI FT ITVQIRFNHNLRKALGIHKCFLTFRIWTTLQPQTGHFLRVFRTQVLQFLNNFAVISINN FT VIRAVDHVLWNVIAHTIHVQQWYSIKYNIY" FT gene complement(1220..1624) FT /gene="AC2" FT CDS complement(1220..1624) FT /codon_start=1 FT /gene="AC2" FT /product="transactivator protein" FT /note="suppressor of PTGS; TrAP" FT /db_xref="GOA:A9XEK0" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:A9XEK0" FT /protein_id="ABP93355.1" FT /translation="MRPSSPSKAHSTQVPIKVQHRLAKKGTRRRRVDLDCGCSYFIALR FT CHGYGFTHRGTHHCSSGREWRVYLGDNKSPVFQDNRAPQQAIPEEPRHHHRADTVQSQP FT EESVGDTQMFSNLPNLDDLTASDWSFLKGI" FT gene complement(1527..2612) FT /gene="AC1" FT CDS complement(1527..2612) FT /codon_start=1 FT /gene="AC1" FT /product="replication initiation protein" FT /note="essential for replication; Rep" FT /db_xref="GOA:A9XEK1" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:A9XEK1" FT /protein_id="ABP93353.1" FT /translation="MAPPNKFRINAKNYFLTYPKCSPTKEEALSQLLNLETPVNKLFIR FT VCRELHENGEPHIHVLLQFEGKIPMQNHRFFDLVSPTRSAHFHPNVQGAKSSTDVKAYV FT EKDGDFIDFGVFQIDGRSARGGQQSANDAYAEAINSGSKAAALNILREKAPKDYVLQFH FT NLNSNLDRIFTPPEEVYVSPFSSSSFDQVPDELEEWAAENVVSAAARPLRPVSVVVEGD FT SRTGKTVWARSLGPHNYLCGHLDLSPKVYRNDAWYNVIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPVQIKGGIPAIFLCNPGPNSSYKEFLDEEKNSALKSWALKNATFITLEGPL FT YSGSNQSAAQASQEGDQASSR" FT gene complement(2162..2455) FT /gene="AC4" FT CDS complement(2162..2455) FT /codon_start=1 FT /gene="AC4" FT /product="AC4 protein" FT /note="required for viral pathogenicity and symptom FT determinant; suppressor of PTGS" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:A9XEK2" FT /protein_id="ABP93358.1" FT /translation="MGNLIYTCSSNLREKFQCKITDSSTSFPQPGQHISIRTFRELRAL FT QMSKPMWRKTETSLILEFSKSMADQLEEVSSLPTTHMPRQSIQGPKLRPSIF" XX SQ Sequence 2763 BP; 737 A; 595 C; 644 G; 787 T; 0 other; accggatggc cgcgattttt tttaatgtgg gccccaccac acacgtgttg acaaggacaa 60 ttggaccaat cagaaacgcc gctcaaagct taattgtttc gtggtcccct tataagagaa 120 ggtgggcctt ccctaaatac aatgtgggat ccattagtaa acgagtttcc cgaaaccgtt 180 cacggtttta ggtgtatgct agccgttaaa tatcttcagc tagtagaaaa gacatattct 240 ccagacactc tcgggtacga tttaatccgg gatttaattt cagtcatcag ggccagaaat 300 tatgtcgaag cgaccagcag atataatcat ttccacgccc gcctcgaagg tacgccgccg 360 tctcaacttc gacagcccat actccagccg tgcttctgcc cccattgtcc gcgtcaccaa 420 agcaaaagca tgggcgaaca ggcccatgaa caggaagccc aggatgtaca ggatgtacag 480 aagcccagat gtgccgaggg gatgtgaagg cccatgtaag gcccagtcgt ttgagtctcg 540 acatgatgtc caacacatag gtaaagtcat gtgtgttagt gatgttacac gtggaactgg 600 gcttacccat cgagttggta aaaggttttg tgttaagtcc gtctatgttc tgggcaagat 660 ttggatggat gagaacatca agaccaagaa tcacacgaat agtgttatgt tttttcttgt 720 tagagatcgt aggcccgtag ataagcccca agactttggt gaggtattca acatgtttga 780 taatgagccc agtacggcga ctgtgaagaa cgttcatcgt gacaggtatc aggtgctcag 840 gaagtggcat gcaactgtga ctggtggtca atatgcatcg aaggagcaag cactcgtgaa 900 gaagtttatt agggttaaca attatgttgt gtataaccag caagaggctg gcaagtatga 960 gaatcatagt gagaatgcgt tgatgttgta tatggcgtgt acccacgcct ctaaccctgt 1020 gtatgcgacg ttgaagatac ggatatattt ctacgactct gtaaccaact gaaattaata 1080 aatattatat tttattgaat accattgttg tacatgaatt gtgtgtgcta ttacattcca 1140 taatacatgg tcgaccgctc taattacatt gtttatacta attacagcaa aattatttaa 1200 aaactgcaac acctgggtcc taaataccct taagaaatga ccagtctgag gctgtaaggt 1260 cgtccagatt cggaaggtta gaaaacattt gtgtatcccc aacgctttcc tcaggttgtg 1320 attgaaccgt atctgcacgg tgatgatgtc tcggttcctc aggaatggcc tgttgtggtg 1380 ctcggttatc ttgaaataca ggggatttgt tatctcccag ataaacacgc cattctctgc 1440 ctgagctgca gtgatgagtt cccctgtgcg tgaatccata gccgtggcag cgtaatgcga 1500 tgaaatatga acagccgcag tctaggtcaa cgcgacgacg cctggtcccc ttcttggcta 1560 gcctgtgctg cactttgatt ggaacctgag tagagtgggc cttcgagggt gatgaaggtc 1620 gcattcttca aagcccaact tttgagtgcg ctatttttct cttcatccaa gaactcttta 1680 tagctggagt tgggtcctgg attgcagagg aagatagcgg gaatgccacc tttaatttga 1740 actggctttc cgtattttgt atttgattgc cagtcccttt gggcccccat gaattcctta 1800 aagtgcttta ggtagtgggg atcgacgtca tcaatgacgt tgtaccaggc gtcattacgg 1860 tagaccttag ggctaaggtc tagatgacca cacaaatagt tgtgtggacc caacgaccta 1920 gcccacaccg tctttcccgt tcgactatca ccctctacca ctacacttac gggtcttaat 1980 ggccgcgcag cggcactcac cacgttctcc gcagcccatt cctcaagttc atcgggaact 2040 tgatcaaaag aagaggaaga aaaaggagaa acataaacct cctcaggagg tgtaaaaatc 2100 ctatctaaat tagaatttaa attatgaaat tgtaaaacat aatctttggg agctttctcc 2160 cttaaaatat tgagggccgc agctttggac cctgaattga ttgcctcggc atatgcgtcg 2220 ttggcagact gctgacctcc tctagctgat ctgccatcga tttggaaaac tccaaaatca 2280 atgaagtctc cgtctttctc cacataggct ttgacatctg tagagctctt agctccctga 2340 acgttcggat ggaaatgtgc tgacctggtt ggggaaacga ggtcgaagaa tctgtgattt 2400 tgcattggaa tttttccctc aaattggagg agcacgtgta tatgaggttc cccattttcg 2460 tgtagttctc tgcaaaccct aataaataat ttatttactg gagtttctaa gtttagtaat 2520 tgggaaagtg cctcttcttt agtaggagag cacttgggat atgtgaggaa ataatttttt 2580 gcatttatcc tgaatttatt cggaggagcc attgacttgg tcaatcggtg tccagcaaac 2640 ttggctatgc aattggtgtc tggtgtctta tttatactta gacaccgaat ggcatatctg 2700 taattgtgga aagtacttta attcaaattt caaaatgccc aaagcggcca tccgtctaat 2760 att 2763 //