ID EF194760; SV 1; circular; genomic DNA; STD; VRL; 2762 BP. XX AC EF194760; XX DT 24-JAN-2007 (Rel. 90, Created) DT 24-JAN-2007 (Rel. 90, Last updated, Version 1) XX DE Tomato leaf curl Arusha virus isolate AFTT23 segment DNA-A, complete DE sequence. XX KW . XX OS Tomato leaf curl Arusha virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2762 RA Shih S.L., Tsai W.S., Green S.K., Lee L.M.; RT "Molecular diversity of tomato leaf curl virus in Tanzania"; RL Unpublished. XX RN [2] RP 1-2762 RA Shih S.L., Tsai W.S., Green S.K., Lee L.M.; RT ; RL Submitted (21-DEC-2006) to the INSDC. RL Virology Unit, AVRDC-The World Vegetable Center, P. O. Box 42, Tainan, RL Taiwan, Republic of China XX DR MD5; ec6ab426793ba37a1270c1d92cac8e42. XX FH Key Location/Qualifiers FH FT source 1..2762 FT /organism="Tomato leaf curl Arusha virus" FT /segment="DNA-A" FT /host="tomato" FT /isolate="AFTT23" FT /mol_type="genomic DNA" FT /country="Tanzania:Kilimanjaro" FT /db_xref="taxon:392761" FT gene 136..480 FT /gene="V2" FT CDS 136..480 FT /codon_start=1 FT /gene="V2" FT /product="pre-coat protein" FT /db_xref="GOA:A2ICQ0" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:A2ICQ0" FT /protein_id="ABM73375.1" FT /translation="MWDPLVNEFPESVHGFHCMLAIKYLQAVEESYEPNTLGHDLIRDL FT ISVVRARDYVEATRRYNHFHARLEGSSKAELRQPLFQPCCCPHCPRHKQTQVMDVQAHV FT SQAQNVSHVP" FT gene 296..1072 FT /gene="V1" FT CDS 296..1072 FT /codon_start=1 FT /gene="V1" FT /product="coat protein" FT /db_xref="GOA:A2ICQ1" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:A2ICQ1" FT /protein_id="ABM73371.1" FT /translation="MSKRPADIIISTPASKVRRRLNFDSPYSSRAAVPIVPGTSKRRSW FT TYRPMYRKPRMYRMFRSPDVPRGCEGPCKVQSYEQRDDVKHTGIVRCVSDVTRGNGITH FT GVGKRFCIKSIYILGKIWMDENIKKQNHTNQVMFFLVRDRRPYGPSPMDFGQVFNMFDN FT EPSTATVKNDLRDRYQVLRKFHATVVGVPSGMKEQALLKRFFRINNHVVYNHQETAKYE FT NHTENALLLYMACTHASNPVYATLKIRIYFYDSVGN" FT gene complement(1069..1473) FT /gene="C3" FT CDS complement(1069..1473) FT /codon_start=1 FT /gene="C3" FT /product="replication enhancement protein" FT /db_xref="GOA:A2ICQ2" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:A2ICQ2" FT /protein_id="ABM73373.1" FT /translation="MDLRTGELITVHQAQSGVYTWEIANPLYFSITEHSKRPFNYNHDI FT ITVQIRFNHNLRKELGIHKCFMAFKIWTTLQPQTGLFLRVFKTQVRKYLDNLGVISINN FT VIRAIEYVLFDVINGTLWVEQNYDIKFKLY" FT gene complement(1214..1621) FT /gene="C2" FT CDS complement(1214..1621) FT /codon_start=1 FT /gene="C2" FT /product="transcriptional activation protein" FT /db_xref="GOA:A2ICQ3" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:A2ICQ3" FT /protein_id="ABM73372.1" FT /translation="MRSSSPSNSHCTQVPIKVQHRAAKQRLQRRKRIDLNCGCSYYLSL FT NCRNHGFTHRGTHHCASGTEWRLYLGNRQSPIFQHHGTLKETVQLQPRHHHSTNPIQPQ FT PKEGTGDSQVFHGLQDLDNLTASDWSFLKSL" FT gene complement(1515..2609) FT /gene="C1" FT CDS complement(1515..2609) FT /codon_start=1 FT /gene="C1" FT /product="replication-associated protein" FT /db_xref="GOA:A2ICQ4" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:A2ICQ4" FT /protein_id="ABM73370.1" FT /translation="MPPPKRFQINSKNYFLTYPKCSLNKEEALSQLLNTDTPTNKKFIK FT ICRELHEDGEPHLHVLIQFEGKFNCKNNRFFDLVSPTRSTHFHPNIQGAKSSSDVKSYI FT DKDGDALEWGEFQIDGRSARGGCHNANDACAEALNAGSAEAALAIIREKLPKDFIFQYH FT NLKSNLDRIFTPPLEEYVSPFLCSSFDQVPEELEEWAAQNVVTAAARPLRPMSIVIEGD FT SRTGKTMWARSLGPHNYLCGHLDLSPKVYSNNAWYNVIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPIQIKGGIPAIFLCNPGPTSSYKEYLDEEKNAPLKAWAIKNAVFFTIQQPL FT YSSSHQGPTQSSQTEASAEEEDRP" FT gene complement(2195..2452) FT /gene="C4" FT CDS complement(2195..2452) FT /codon_start=1 FT /gene="C4" FT /product="C4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:A2ICQ5" FT /protein_id="ABM73374.1" FT /translation="MGSLISTCLFSSKENSTAKITDSSTWYPQPGQHISIRTFRELNQA FT PTSSPTSTRMETHSNGGNSRSTAEVLEEAAIMLTTHAPRH" XX SQ Sequence 2762 BP; 719 A; 556 C; 628 G; 859 T; 0 other; accggatggc cgcgcccccg aaaaagcatg gacccccttg aaatatacgg agccaatcag 60 attgcagcct caatgcttag ttaatttttt ttttgtcttt atatacttgg ctgttaagta 120 ttaaacgccg tcattatgtg ggatccgttg gtaaatgagt ttccggagtc tgttcacggg 180 tttcattgta tgcttgccat aaaatatttg caggccgttg aagagtctta cgagcccaat 240 acattgggcc acgatttaat tagagattta atctctgtag ttagagcccg ggattatgtc 300 gaagcgaccc gccgatataa tcatttccac gcccgcctcg aaggttcgtc gaaggctgaa 360 cttcgacagc ccttattcca gccgtgctgc tgtccccatt gtcccaggca caagcaaacg 420 caggtcatgg acgtacaggc ccatgtatcg caagcccaga atgtatcgca tgttccgtag 480 tccagatgtt cctcggggat gtgagggtcc ctgtaaggtt cagtcttatg agcagaggga 540 tgatgtgaag cacaccggta ttgttcgttg tgttagtgat gtaactagag gtaatggaat 600 tactcatgga gtaggaaaac ggttctgcat taagtccata tacattttag gaaaaatatg 660 gatggatgag aatatcaaga agcagaatca tactaatcag gtcatgtttt ttttggtccg 720 tgatagaagg ccctatggcc caagcccaat ggattttggg caggtgttta acatgtttga 780 taatgagccc agtacagcca ctgtgaagaa tgatctccga gacagatatc aagttttgcg 840 gaaatttcat gcaactgttg tcggtgtccc ctctgggatg aaagagcagg cgttacttaa 900 aagatttttt agaattaata atcatgtagt ttataatcat caggagactg ctaagtatga 960 gaatcatact gagaatgctc tgttgttgta tatggcatgt actcatgcct ctaaccctgt 1020 gtatgctacg ttgaaaatac gtatctattt ctatgattca gttgggaatt aataaagttt 1080 gaattttata tcataatttt gttccaccca taaagtgcca ttgattacat caaacaatac 1140 atattctatt gctctaatta cattattaat tgaaattaca ccaagattgt ctaaatattt 1200 cctaacttga gtcttaaaga ctcttaagaa aagaccagtc tgaggctgta aggttgtcca 1260 gatcttgaag gccatgaaac acttgtgaat ccccagttcc ttccttaggt tgtggttgaa 1320 tcggatttgt actgtgatga tgtcgtggtt gtagttgaac ggtctctttg agtgttccgt 1380 gatgctgaaa tataggggat tggcgatttc ccaggtatag acgccactct gtgcctgatg 1440 cacagtgatg agttccccgg tgcgtaaatc catggttgcg acagttgagc gacaagtagt 1500 acgagcaccc gcaattaagg tctatcctct tcctccgctg aagcctctgt ttggctgctc 1560 tgtgttggac cttgatggga acttgagtac aatggctgtt ggatggtgaa gaagaccgca 1620 tttttaattg cccaggcctt taatggtgcg ttcttttcct catccaagta ctctttatat 1680 gatgaagtgg gtcctggatt gcagaggaag attgccggga tacctccttt aatttgaatt 1740 ggtttcccgt actttgtgtt gctttgccag tccctttgtg cgcccatgaa ttctttaaag 1800 tgctttagat aatgaggatc gacgtcatca atgacgttgt accaagcatt attactgtac 1860 acctttggac tgaggtcaag atgaccacac aaataattgt gtggtcctaa tgacctagcc 1920 cacattgtct tgccggtacg actatcccct tcaatcacaa tactcatggg tctcaatggc 1980 cgcgcagcgg cagtgacaac attctgtgcc gcccactctt caagttcctc tggaacttga 2040 tcgaacgaag aacataagaa aggtgaaaca tattcctcca acggaggtgt aaaaatccta 2100 tctaaattac ttttcaaatt atgatactga aaaataaaat ctttagggag tttctcccta 2160 ataatagcca gagcggcttc agcggaccct gcgtttaatg cctcggcgca tgcgtcgtta 2220 gcattatggc agcctcctct agcacttctg ccgtcgatct ggaattcccc ccattcgagt 2280 gcgtctccat ccttgtcgat gtaggacttg acgtcggagc ttgatttagc tccctgaatg 2340 ttcggatgga aatgtgttga cctggttggg gataccaggt cgaagaatct gttatttttg 2400 cagttgaatt ttccttcgaa ctgaataagc acgtggagat gaggctcccc atcttcgtgt 2460 agttctctgc aaattttgat gaatttttta tttgttggag tatcagtatt taataattga 2520 gatagtgctt cttctttatt tagagagcat ttgggataag tgaggaaata atttttggaa 2580 tttatttgga aacgcttagg aggaggcatg ttggtcaatg ggtaccgatt gactcacttg 2640 gaatgcttct cctggtatat cggtacccaa tatatagtgg gtaccgaatg ccagtattgt 2700 aataacaaaa agttactcta cccttattgt caaattgtta aagcggtcat ccgtctaata 2760 tt 2762 //