ID   EF175734; SV 1; circular; genomic DNA; STD; VRL; 1358 BP.
XX
AC   EF175734;
XX
DT   01-JAN-2008 (Rel. 94, Created)
DT   07-SEP-2010 (Rel. 106, Last updated, Version 2)
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DE   Radish leaf curl virus satellite DNA beta, complete sequence.
XX
KW   .
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OS   Radish leaf curl betasatellite
OC   Viruses; Tolecusatellitidae; Betasatellite.
XX
RN   [1]
RP   1-1358
RX   DOI; 10.1094/PDIS-91-8-1053B.
RX   AGRICOLA; IND44010631.
RA   Singh A.K., Chattopadhyay B., Pandey P.K., Singh A.K., Chakraborty S.;
RT   "A New Begomovirus Species Causing Leaf Curl Disease of Radish in India";
RL   Plant Dis. 91(8):1053-1053(2007).
XX
RN   [2]
RP   1-1358
RA   Singh A.K., Chattopadhyay B., Pandey P.K., Singh A.K., Chakraborty S.;
RT   ;
RL   Submitted (09-DEC-2006) to the INSDC.
RL   School of Life Sciences, Jawaharlal Nehru University, New Delhi, Delhi 110
RL   067, India
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DR   MD5; 8348e19292c7844185cf94defcc9f626.
DR   EuropePMC; PMC3305473; 22339942.
DR   EuropePMC; PMC4566980; 26113193.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1358
FT                   /organism="Radish leaf curl betasatellite"
FT                   /host="radish cultivar Japanese white"
FT                   /isolate="Varanasi"
FT                   /mol_type="genomic DNA"
FT                   /country="India"
FT                   /isolation_source="plants showing leaf curl symptoms"
FT                   /collected_by="S. Chakraborty"
FT                   /db_xref="taxon:662596"
FT   gene            complement(188..544)
FT                   /gene="C1"
FT   CDS             complement(188..544)
FT                   /codon_start=1
FT                   /gene="C1"
FT                   /product="C1"
FT                   /note="suppressor of RNAi; pathogenecity factor; beta C1;
FT                   Sat C1"
FT                   /db_xref="InterPro:IPR018583"
FT                   /db_xref="UniProtKB/TrEMBL:A9XCM1"
FT                   /protein_id="ABP04010.1"
FT                   /translation="MTIKYKNQKGMEFIIDVRLKEHDSILVQIQIFSTRSPGLATRRFM
FT                   IPYGHSGIIPPFNFNTLEERIHNLLAIMYKESTIGEFKQEDMIEGIDMLMMEEAPVIDI
FT                   NVMDEYDVYTRSSV"
XX
SQ   Sequence 1358 BP; 434 A; 221 C; 274 G; 429 T; 0 other;
     accggtggcg agcggatttt tttgcgtcgt tgtgggaccc acttgttaga tctgcagaat        60
     aaatgggcct ttttatgcta ttgggcctat atttattggg ctttgtataa tatatttaaa       120
     ttgggctttg tagtcatgag aataagataa taaaacagtt tcattgatta tctgtataaa       180
     tacgcattta tacagatgaa cgcgtataca catcgtattc atccattaca ttaatgtcta       240
     ttacaggagc ctcttccatc atcagcatat caattccttc tatcatgtct tcttgcttga       300
     attctcctat agtagactct ttgtacatga ttgctaacag gttgtgtatt ctttcttcca       360
     gagtgttgaa gttgaatggt ggtatgattc cactatgccc gtatggaatc atgaatctcc       420
     ttgttgctag ccccggagat cgtgttgaga atatttgtat ttgcactaga atggagtcat       480
     gttctttcag gcgtacgtct atgatgaatt ccatcccttt ctggtttttg tatttgatcg       540
     tcattgtgtt gtgtgagtgt tcatatatga tgaacactca ttaaatagaa catatatttg       600
     tgatgtatgg ttattattga tatacgtggt ttgtttatgt tcatatatta tgtagtggag       660
     atatttgtta tggatgtgga cgttgatatt atttggtttc gtgagagtga gttttaatga       720
     atcctaatta tgatataatt aggaagaaag aaagaaaaag aaaagaatga aaaaatagaa       780
     aatgaaaaaa atagaaaact acataaacta taaattctat tctatgaaaa tggtcgcgca       840
     gcgaaacaga aaaccgaaac taacaaaaga aataaaaaaa atgaaaaaag aaataaacaa       900
     cagatgaaac gtgagaagag aaaataaaaa caagaaacat cagtggtccc cactgaataa       960
     ataaaaataa aaaaagaaaa agaagaaaat gatttaatcc ttatacttga gttacttact      1020
     gttttaccga acggtaaaat agtaattgat atttacacaa gggtaaatat ctgagtcccc      1080
     gataggtaaa tgtgtcccca atatatcggg gactcaattg gtgacccata ttttgctttc      1140
     ctaaaatacc cttgtctctg tgtctggtag gcgcgtggga gtggactgaa aaagtagaat      1200
     ttctctctcc taaaactcgt cggaactccg attaaggcac ttccggtcac caatttgcga      1260
     cacgcgcggc ggtgcgtacc cctgggaggg tagggtacca ctacgctacg cagcagcctt      1320
     agctacgccg gagcttagct cgccaccgtt ctaatatt                              1358
//