ID   EF159702; SV 1; linear; genomic RNA; STD; VRL; 1006 BP.
XX
AC   EF159702;
XX
DT   13-JAN-2007 (Rel. 90, Created)
DT   13-JAN-2007 (Rel. 90, Last updated, Version 1)
XX
DE   Tobacco streak virus strain APKu coat protein gene, complete cds.
XX
KW   .
XX
OS   Tobacco streak virus
OC   Viruses; Riboviria; Bromoviridae; Ilarvirus.
XX
RN   [1]
RP   1-1006
RA   Sarovar B., Sreenivasulu M., Sai Gopal D.V.R.;
RT   "Molecular diversity of RNA3 in Tobacco streak virus strains from South
RT   India";
RL   Unpublished.
XX
RN   [2]
RP   1-1006
RA   Sarovar B., Sreenivasulu M., Sai Gopal D.V.R.;
RT   ;
RL   Submitted (06-DEC-2006) to the INSDC.
RL   Department of Virology, Sri Venkateswara University, S.V. University,
RL   Tirupati, Andhra Pradesh 517502, India
XX
DR   MD5; b6c2759d4cb3d861c732a305c3501e1a.
DR   EuropePMC; PMC3550807; 23730009.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1006
FT                   /organism="Tobacco streak virus"
FT                   /segment="RNA 3"
FT                   /host="gherkin"
FT                   /strain="APKu"
FT                   /mol_type="genomic RNA"
FT                   /country="India:Kuppam"
FT                   /isolation_source="infected leaf material"
FT                   /db_xref="taxon:12317"
FT   CDS             1..717
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /db_xref="GOA:A1Z1Q4"
FT                   /db_xref="InterPro:IPR002681"
FT                   /db_xref="InterPro:IPR016405"
FT                   /db_xref="UniProtKB/TrEMBL:A1Z1Q4"
FT                   /protein_id="ABM53866.1"
FT                   /translation="MNNLIQSPDHPSNAMSSRTNNRFNNNSRCPTCFDELDAVARGCPA
FT                   HAPANTVSRRQRRNAARAAAFRNANARMTAPIPVVPVSRPQAKTSLKLPNNQVWVTRKA
FT                   SEWSAKTIDTNDAIPFKTIVEGIPEINSETKFYRLLIGFVAVSDGTFGMVDGVTGDVIP
FT                   DPPVVGRLGFKKNTYRSRDFDLGGKLLNQLDDRAIVWCLDERRRDAKRVQLAGYWIAIS
FT                   KPAPLMPPEDFLVNQD"
FT   3'UTR           718..1006
XX
SQ   Sequence 1006 BP; 249 A; 252 C; 254 G; 251 T; 0 other;
     atgaataatt tgatccaaag tccagaccat ccatccaacg ccatgtcttc ccgtactaac        60
     aaccgcttta acaacaacag cagatgccca acttgtttcg acgagttgga tgcagtagcg       120
     aggggttgcc ccgctcatgc tcccgcgaac actgtttcgc gacgtcagcg gcgaaatgcc       180
     gctagagctg ccgcgtttag gaacgcgaat gctcgaatga ccgcaccaat tcctgtggtg       240
     ccggtttccc gccctcaagc gaagacatcg ttgaagctac ccaacaatca agtttgggta       300
     actcgcaaag cgagtgaatg gtctgcaaag accattgata ccaacgatgc tatccccttc       360
     aagaccatag tcgaggggat tcccgaaatc aattcggaga cgaagtttta ccgtctccta       420
     attggttttg tcgccgtctc tgatgggacg tttgggatgg ttgatggagt gacgggagac       480
     gtcattccgg acccaccggt cgttggacgg ttgggtttca agaagaatac ctaccgcagc       540
     cgagattttg atctcggcgg taagcttctc aaccaactag acgatagagc tatcgtctgg       600
     tgcctcgacg aaaggcgtcg agatgccaag agggttcagc tggcgggata ttggattgcc       660
     atatccaaac cagctccctt gatgccacca gaagattttc tggtgaatca agattgacta       720
     gatggtcacc tcggtaggac cgagttgccg tacattagag gtaattcctg tgtacgatgt       780
     gggtttacac caccacgtat tgtagatcaa tacgtttggt cgtgtaactt ttgttcctat       840
     gaacaacatg catagctgcc gcgcatccgg gcgtgagtct atgacccatg cgagcattcc       900
     gaatcggacg atttccgtgg aaaaccatga gaccttaagg tcgatgcttg cgtttggtgc       960
     cagtagtata tatatatact actgatgcct cctttatacc agatgc                     1006
//