ID EF155993; SV 1; linear; genomic RNA; STD; VRL; 4223 BP. XX AC EF155993; XX DT 05-OCT-2010 (Rel. 106, Created) DT 19-NOV-2010 (Rel. 106, Last updated, Version 2) XX DE Sweet potato feathery mottle virus isolate 37MBL polyprotein gene, partial DE cds. XX KW . XX OS Sweet potato feathery mottle virus OC Viruses; Riboviria; Potyviridae; Potyvirus. XX RN [1] RP 1-4223 RX DOI; 10.1111/j.1365-294X.2010.04682.x. RX PUBMED; 20609081. RA Tugume A.K., Cuellar W.J., Mukasa S.B., Valkonen J.P.; RT "Molecular genetic analysis of virus isolates from wild and cultivated RT plants demonstrates that East Africa is a hotspot for the evolution and RT diversification of sweet potato feathery mottle virus"; RL Mol. Ecol. 19(15):3139-3156(2010). XX RN [2] RP 1-4223 RA Tugume A.K., Cuellar W.J., Mukasa S.B., Valkonen J.P.T.; RT ; RL Submitted (30-NOV-2006) to the INSDC. RL Department of Applied Biology, University of Helsinki, P.O. Box 27 RL (Latokartanonkaari 7), Helsinki FIN-00014, Finland XX DR MD5; c0b563e7d0e94558452af72286a4b778. XX FH Key Location/Qualifiers FH FT source 1..4223 FT /organism="Sweet potato feathery mottle virus" FT /host="Lepistemon owariensis" FT /isolate="37MBL" FT /mol_type="genomic RNA" FT /country="Uganda:Mbale" FT /isolation_source="leaf" FT /db_xref="taxon:12844" FT CDS <1..4002 FT /codon_start=1 FT /product="polyprotein" FT /db_xref="GOA:E1U286" FT /db_xref="InterPro:IPR001205" FT /db_xref="InterPro:IPR001592" FT /db_xref="InterPro:IPR001730" FT /db_xref="InterPro:IPR007094" FT /db_xref="InterPro:IPR009003" FT /db_xref="UniProtKB/TrEMBL:E1U286" FT /protein_id="ABO92955.1" FT /translation="GATSCVLHQTKDALSKHLRLKGVWNKSVITQDLFILAGVFAGGLW FT MIMAGLKESFDQTVLHQGKEKRQMQKLKFRKARDNKLGFEVHADDGTIEHFFGSAYTKK FT GKQKGKVTGMGSKNRKFINMYGFDPTEYSFVRFVDPLTGAVIDDSPYTDIFLVQEKIGE FT ARLNAIKEDELSREKVAQNPGIHAYYINEITNAALKVDLTPHNPLLACERHSTIAGHPE FT YEGVLRQTGPPIKMTFNDVPVSPEEASLVGHESKSLFRGLRDYNPIASVICHLMNEADG FT RTSDCFGIGYGGLIITNRHLFKRNNGTLTIKSRHGEFVIKNTTQLGMKPCADRDILIIR FT MPKDIPPFPQRIKFRVPKENERICLVGSNFQDKSITSTISETSVTCHVPNSHFWKHWID FT TKDGHCGLPLVSTTDGALLGVHSLSNLTNTQNFFASFPENFEAEYLRTPEAMDWIKKWS FT YNPDEICWGTLELKTGQPATPFKVSKLITDLEGIQVYAQTRSDRWVQDRLYGNLKAVGQ FT CPAQLVTKHVVKGKCMLFDLYLQQDQSEREYFKPLMGAYGKSRLNKEAYNKDLFKYATQ FT IQAGDVQVDTFELAERSVVSMLTSKGFEKCNYITDPEEILKALNMKAAVGAMYSGKKKD FT YFEGMSDHDVEDHLFHSCRRLFMGHKGLWNGSLKAELRPMEKVELNKTRTFTAAPLDTL FT LGGKVCVDDFNNMFYNHHLKCPWTVGITKFYQGWDRLLTSLPEGWVYCDADGSQFDSSL FT SPYLINSVLNIRREFMEDWDVGDQMLRNLYTEIVYTPILTPDGTIVKKFKGNNSGQPST FT VVDNTLMVVLAVHYTLLKLGIQESEFDKCCVFFANGDDLLLAMRPDTAHLLDKFGECFS FT ELGLNYDFSSRTNKKEDLWFMSHCGVKRDGIFIPKLEPERIVSILEWDRSHEPIHRLEA FT ICAAMVESWGYDELLHHIRKFYAWVLDQAPYNELARNGKAPYIAETALKALYTGVQPNA FT SELSVYTRVLKEMYDDSMLQENDLEVYHQSNESNEFKDAGADPPTPKPKNVPPPPTITE FT ITDPEDPKQAALKAARAKQPAVIPESYGRDTSKERESIMGASSKSMRDKDVNVGTVGTF FT VVPRVKMNANKKRQPMVNGRAIINFQHLSTYEPEQFEVANTRSTQEQFQAWYEGVKGDY FT GVDDTGMGILLNGLMVWCIENGTSPNINGVWTMMDGDEQVTYPIKPLLDHAVPTFRQIM FT THFSDVAEAYIEMRNRTKAYMPRYGLQRNLTDMSLARYAFDFYELHSTTPARAKEAHLQ FT MKAAALKNARNRLFGLDGNVSTQEEDTERHTTTDVTRNIHNLLGMRGVQ" FT mat_peptide <1..27 FT /product="cytoplasmic inclusion protein" FT /note="CI" FT mat_peptide 28..186 FT /product="6K2 protein" FT mat_peptide 187..762 FT /product="VPg protein" FT mat_peptide 763..1491 FT /product="NIa-Pro protein" FT mat_peptide 1492..3054 FT /product="nuclear inclusion body protein" FT /note="NIb" FT mat_peptide 3055..3999 FT /product="coat protein" FT /note="CP" FT 3'UTR 4003..4223 XX SQ Sequence 4223 BP; 1365 A; 785 C; 981 G; 1092 T; 0 other; ggagccacct cttgtgtgct tcatcaaaca aaagatgcac tctcaaagca ccttcgtctg 60 aaaggagtgt ggaataaatc agtcatcaca caggatttgt tcattttagc aggggtattt 120 gctggtggtt tgtggatgat aatggcgggg ctaaaggaat cattcgatca aactgtgtta 180 caccaaggaa aagaaaagcg acaaatgcaa aagcttaagt ttaggaaagc acgagataat 240 aaacttggat tcgaagtgca tgctgatgat ggaactattg aacacttctt tggtagtgca 300 tacaccaaga aagggaaaca aaaaggaaag gtcactggaa tgggatcaaa gaacagaaaa 360 tttataaaca tgtacggatt tgatcccact gaatattcct ttgtccgatt tgttgaccca 420 ttaactggag ctgtgataga tgattcccca tacacagata tttttcttgt tcaggagaaa 480 attggtgagg ctcgtttgaa tgccatcaaa gaagatgaac tttcaagaga gaaagttgca 540 caaaatccag gaattcatgc atactatatc aatgaaatca caaatgctgc actcaaagtt 600 gatcttacac cgcacaaccc actacttgca tgtgagagac atagcactat tgctggtcat 660 cctgaatatg aaggagtttt gagacaaacc ggacccccaa ttaagatgac atttaatgac 720 gtgccagtga gtcctgaaga ggcaagttta gttgggcatg agagtaagtc attattcaga 780 ggcctacggg attacaaccc aatagcaagt gttatatgtc acctaatgaa tgaagcggat 840 gggagaacaa gcgattgttt tggaatcgga tacggtggtc tcattataac aaataggcat 900 cttttcaaaa ggaacaatgg tacattaaca attaaatctc gacatggaga gtttgttatc 960 aagaacacaa cccaacttgg gatgaaacct tgcgctgaca gagacatact catcattagg 1020 atgcctaagg atatacctcc gtttccacaa cgaatcaaat ttagggtccc aaaagagaac 1080 gaaagaattt gcttggttgg gtcaaatttt caagacaaat caattacaag cacgatctct 1140 gaaactagtg tcacatgtca cgtgccaaac tcacattttt ggaagcactg gattgacacg 1200 aaggatgggc attgtggcct ccccttagtg agtactactg atggtgctct gttgggagta 1260 cacagcttgt caaatttgac aaacacccaa aacttctttg cctcgtttcc tgagaatttt 1320 gaagcggagt acttgaggac tcctgaggca atggactgga taaagaaatg gagctataac 1380 ccagacgaga tttgttgggg aacattggaa ttgaagacag gacaacctgc caccccattc 1440 aaagtgtcca aactgatcac ggatctagaa ggaatacaag tgtatgccca gacaaggtca 1500 gacagatggg tccaggatag attgtatggc aatctcaaag cagttggtca atgccctgca 1560 cagttagtga ctaaacatgt tgtaaaaggt aaatgcatgc tattcgacct ctacttgcaa 1620 caagaccaat ctgaaaggga atacttcaaa cctctcatgg gagcatatgg gaaaagtagg 1680 cttaataagg aagcttacaa taaggatcta tttaagtacg caacacaaat tcaggcagga 1740 gatgtgcaag tggatacgtt cgaattggcg gaaagatctg tcgtttccat gctcacgtca 1800 aaaggatttg aaaagtgcaa ctacatcaca gatccagagg aaattctgaa agcactgaat 1860 atgaaggctg cagtcggtgc gatgtacagt ggaaagaaga aggattactt tgaaggaatg 1920 agcgaccacg atgtagaaga ccatctcttt cacagttgca ggcgtttgtt catgggacac 1980 aaaggtcttt ggaacggatc cttaaaagct gagttgagac ctatggaaaa agtggaactt 2040 aacaaaacaa gaaccttcac agcggctcct cttgacacgc tacttggtgg taaggtgtgt 2100 gtagacgatt tcaacaacat gttttacaac caccatttaa aatgtccatg gacggtagga 2160 ataaccaaat tctaccaagg atgggatagg cttctcacat ctctacctga gggatgggtt 2220 tattgtgacg ctgatggttc acaatttgat agttctctct ctccatattt gattaattca 2280 gttcttaata taagaaggga atttatggaa gattgggatg ttggtgatca aatgcttcgg 2340 aatttataca cagaaatagt gtatacacca atactgacac cagatggaac catagtgaag 2400 aagttcaaag gtaacaacag tggacagcca tccactgtgg ttgataatac acttatggtt 2460 gtgttagcag ttcactacac actgctgaaa ctaggaatcc aagaaagcga gtttgataaa 2520 tgctgtgtct ttttcgcaaa tggtgatgac ttattgttgg caatgaggcc agatacagcc 2580 catttactgg ataagtttgg tgaatgtttt tctgaattag gactcaatta tgacttttca 2640 tcacgaacaa ataagaaaga agatctatgg tttatgtcac actgtggcgt gaaacgtgat 2700 ggaatattta tcccgaagtt ggagcctgaa aggattgttt caattcttga atgggatcgt 2760 tcacacgagc caattcatcg actggaagca atatgtgccg cgatggtgga atcatggggt 2820 tatgatgaac ttcttcatca tattaggaaa ttctatgcat gggttctgga ccaagcccca 2880 tacaatgaac tagcacgaaa tgggaaagca ccatacatag ctgaaactgc actcaaagca 2940 ctctatactg gtgttcaacc taatgcttct gaattgagtg tgtatacgag agtgctcaaa 3000 gaaatgtatg atgacagtat gctccaagag aatgatttgg aagtgtatca tcaatctaat 3060 gagagcaatg aatttaaaga tgcaggggcg gaccctccaa cccctaagcc taagaacgtt 3120 cctccaccac ccacaataac tgaaattact gatccagagg acccaaagca ggcagctttg 3180 aaagctgcac gagcaaagca acccgcagtc attccagaat catatggacg agacacgagc 3240 aaagaaaggg agtcaataat gggggcatca tcaaagagta tgagggataa agatgtgaat 3300 gttggcaccg ttggtacatt tgttgtgcca cgtgtcaaga tgaatgcaaa caagaagagg 3360 caaccaatgg tcaatggaag ggccattata aatttccagc acttgtcaac gtatgaacca 3420 gagcagtttg aggttgcaaa cacccggtcg actcaagaac agttccaagc atggtatgaa 3480 ggagtaaaag gggattatgg tgttgacgac acaggaatgg ggatcttatt gaatggacta 3540 atggtttggt gtattgaaaa tggcacatcc ccaaatataa atggtgtgtg gacaatgatg 3600 gatggtgatg agcaagtgac atatccaatt aaaccattac tggaccatgc agtgcctact 3660 tttaggcaga ttatgacgca cttcagtgac gttgctgaag cttacataga gatgcgaaac 3720 cgtacaaagg cgtacatgcc aagatatggt ctacaacgta atttgactga tatgagtctt 3780 gcgcgatatg catttgattt ctacgagctg cattcaacta cacctgcacg tgctaaagaa 3840 gcacatttac agatgaaggc agccgcactt aagaatgcgc gaaatcggtt gtttggtttg 3900 gacggaaacg tctccacgca agaagaagat acggagaggc acacgacaac tgatgttact 3960 agaaatatac ataacctctt aggaatgagg ggtgtgcaat aggacatcct ctgcactgta 4020 gcttatactt atgttatctt tagtatgcct ttaatttaaa ttcgtgtctt tcagtcccga 4080 aggagatggt tgaatgcata acatggtggg attatatctc ggttattgca tttgagaagt 4140 cacctttcta ttacgtatca taagggactc ttaaaagtga ggagtacctc gtaagaaaag 4200 cctttttggt tcgtgatcga gcc 4223 //