ID   EF155981; SV 1; linear; genomic RNA; STD; VRL; 1815 BP.
XX
AC   EF155981;
XX
DT   05-OCT-2010 (Rel. 106, Created)
DT   19-NOV-2010 (Rel. 106, Last updated, Version 2)
XX
DE   Sweet potato feathery mottle virus isolate 65MAS polyprotein gene, partial
DE   cds.
XX
KW   .
XX
OS   Sweet potato feathery mottle virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1815
RX   DOI; 10.1111/j.1365-294X.2010.04682.x.
RX   PUBMED; 20609081.
RA   Tugume A.K., Cuellar W.J., Mukasa S.B., Valkonen J.P.;
RT   "Molecular genetic analysis of virus isolates from wild and cultivated
RT   plants demonstrates that East Africa is a hotspot for the evolution and
RT   diversification of sweet potato feathery mottle virus";
RL   Mol. Ecol. 19(15):3139-3156(2010).
XX
RN   [2]
RP   1-1815
RA   Tugume A.K., Cuellar W.J., Mukasa S.B., Valkonen J.P.T.;
RT   ;
RL   Submitted (30-NOV-2006) to the INSDC.
RL   Department of Applied Biology, University of Helsinki, P.O. Box 27
RL   (Latokartanonkaari 7), Helsinki FIN-00014, Finland
XX
DR   MD5; 956aaa5d8c81e7a8fab4ab861cf275d2.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1815
FT                   /organism="Sweet potato feathery mottle virus"
FT                   /host="Hewittia sublobata"
FT                   /isolate="65MAS"
FT                   /mol_type="genomic RNA"
FT                   /country="Uganda:Masindi"
FT                   /isolation_source="leaf"
FT                   /db_xref="taxon:12844"
FT   CDS             <1..1593
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:E1U274"
FT                   /db_xref="InterPro:IPR001205"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="InterPro:IPR007094"
FT                   /db_xref="UniProtKB/TrEMBL:E1U274"
FT                   /protein_id="ABO92943.1"
FT                   /translation="GNNSGQPSTVVDNTLMVVLAVHYTLLKLGIQESEFDKCCVFFANG
FT                   DDLLLAMRPDTAHLLDQFSECFSELGLNYDFSSRTNKKEDLWFMSHCGVKRDGIFIPKL
FT                   EPERIVSILEWDRSHEPIHRLEAICAAMVESWGYDELLHHIRKFYAWVLDQAPYNELAR
FT                   NGKAPYIAETALKALYTGVQPNASELSVYTRVLKEMYDDSMLQENDLEVYHQSNERTEF
FT                   KDAGANPPAPKPKDIPPPPTITEITDPEDPKQAALKAARAKQPAVTPESYGRDTSKERE
FT                   SIVGTSSKGVRDKDVNVGTVGTFVVPRVKMNANKKRQPMVNGRAIINFQHLSTYEPEQF
FT                   EVANTRSTQEQFQAWYEGVKGDYGVDDTGMGILLNGLMVWCIENGTSPNINGVWTMMDG
FT                   DEQVTYPIKPLLDHAVPTFRQIMTHFSDVAEAYIEMRNRTKAYMPRYGLQRNLTDMSLA
FT                   RYAFDFYELHSTTPARAKEAHLQMKAAALKNARNRLFGLDGNVSTQEEDTERHTTTDVT
FT                   RNIHNLLGMRGVQ"
FT   mat_peptide     <1..645
FT                   /product="nuclear inclusion body protein"
FT                   /note="NIb"
FT   mat_peptide     646..1590
FT                   /product="coat protein"
FT                   /note="CP"
FT   3'UTR           1594..1815
XX
SQ   Sequence 1815 BP; 569 A; 339 C; 430 G; 477 T; 0 other;
     ggcaataata gtgggcagcc atccactgtg gttgataata cacttatggt tgtgttagca        60
     gttcactaca cactactgaa actaggaatc caagaaagtg agtttgataa atgctgtgtc       120
     tttttcgcaa atggtgatga tttattattg gcaatgaggc cagatacagc ccatttattg       180
     gaccagttta gtgaatgttt ttctgaatta ggactcaatt atgacttttc atcacgaaca       240
     aataagaaag aagatctatg gtttatgtca cactgtggcg tgaaacgtga tggaatattc       300
     attccaaagt tggagcctga aaggattgtt tcaattcttg aatgggatcg ttcacacgaa       360
     ccaattcatc ggctggaagc aatatgtgcc gcgatggtag aatcgtgggg ttatgatgaa       420
     cttcttcatc atattagaaa attctatgca tgggttttgg accaagcccc atacaatgaa       480
     ctagcacgaa atggaaaagc accatacata gctgaaactg cactcaaagc actttatact       540
     ggtgttcaac ctaatgcttc tgaattgagt gtgtatacga gagtgctcaa agaaatgtat       600
     gatgacagca tgctccaaga gaatgatttg gaagtatatc atcaatctaa tgagagaact       660
     gaatttaaag atgcaggagc gaaccctcca gcccctaagc ctaaggacat tcctccacca       720
     cccacaataa ctgaaatcac tgatccagag gacccgaagc aggcagcttt gaaagctgca       780
     cgagcaaagc aacccgcagt cactccagaa tcatatggac gagatacgag caaagaaagg       840
     gagtcaatag tggggacatc atcaaagggc gtgagggata aagatgtgaa tgttggcacc       900
     gttggtacgt tcgttgtgcc acgtgtcaag atgaatgcaa acaagaaaag gcaaccaatg       960
     gtcaatggaa gggccattat aaatttccag cacttgtcaa catatgaacc agagcagttt      1020
     gaggttgcaa acacccggtc gactcaagag caattccaag catggtatga gggagttaaa      1080
     ggggattacg gtgttgacga cacaggaatg gggatcttat tgaatggact aatggtttgg      1140
     tgcattgaaa atggcacatc cccaaatata aatggtgtgt ggacaatgat ggacggtgat      1200
     gagcaagtga catacccaat taaaccatta ttggatcatg cagtgcctac ttttaggcag      1260
     atcatgacgc acttcagtga cgttgctgaa gcctatatag aaatgcgaaa ccgtacaaag      1320
     gcgtacatgc caaggtatgg tctacaacgt aatttgactg atatgagtct tgcgcgatat      1380
     gcatttgatt tttacgagct gcattcaact acacctgcac gtgctaaaga agcacattta      1440
     cagatgaagg cagctgcact taagaatgcg cgaaatcggt tgtttggttt ggacggaaac      1500
     gtctccacgc aagaagaaga tacggagagg cacacgacaa ctgatgttac tagaaatata      1560
     cataacctct taggaatgag gggtgtgcaa taggacatcc tctgcactgt agcttatact      1620
     tatgttatct ttagtatgcc tttaatttaa attcgtgtct ttcagtcccg aaggagatgg      1680
     ttgagtgcat aacatggtgg gattatatct cgggttattg catttgagaa gtcacctttc      1740
     tattacgtat cataagggac tcttaaaagt gaggagtacc tcgtaagaaa agcctttttg      1800
     gttcgtgatc gagcc                                                       1815
//