ID EF155979; SV 1; linear; genomic RNA; STD; VRL; 4331 BP. XX AC EF155979; XX DT 05-OCT-2010 (Rel. 106, Created) DT 19-NOV-2010 (Rel. 106, Last updated, Version 2) XX DE Sweet potato feathery mottle virus isolate 6MBL polyprotein gene, partial DE cds. XX KW . XX OS Sweet potato feathery mottle virus OC Viruses; Riboviria; Potyviridae; Potyvirus. XX RN [1] RP 1-4331 RX DOI; 10.1111/j.1365-294X.2010.04682.x. RX PUBMED; 20609081. RA Tugume A.K., Cuellar W.J., Mukasa S.B., Valkonen J.P.; RT "Molecular genetic analysis of virus isolates from wild and cultivated RT plants demonstrates that East Africa is a hotspot for the evolution and RT diversification of sweet potato feathery mottle virus"; RL Mol. Ecol. 19(15):3139-3156(2010). XX RN [2] RP 1-4331 RA Tugume A.K., Cuellar W.J., Mukasa S.B., Valkonen J.P.T.; RT ; RL Submitted (30-NOV-2006) to the INSDC. RL Department of Applied Biology, University of Helsinki, P.O. Box 27 RL (Latokartanonkaari 7), Helsinki FIN-00014, Finland XX DR MD5; 54f3ade24b10c4c2a39315b79c6716a3. XX FH Key Location/Qualifiers FH FT source 1..4331 FT /organism="Sweet potato feathery mottle virus" FT /host="Ipomoea indica (Ipomoea acuminata)" FT /isolate="6MBL" FT /mol_type="genomic RNA" FT /country="Uganda:Mbale" FT /isolation_source="leaf" FT /db_xref="taxon:12844" FT CDS <1..4110 FT /codon_start=1 FT /product="polyprotein" FT /db_xref="GOA:E1U272" FT /db_xref="InterPro:IPR001205" FT /db_xref="InterPro:IPR001592" FT /db_xref="InterPro:IPR001730" FT /db_xref="InterPro:IPR007094" FT /db_xref="InterPro:IPR009003" FT /db_xref="UniProtKB/TrEMBL:E1U272" FT /protein_id="ABO92941.1" FT /translation="IAVLSSARAQLLEFDNLSMDASYNEMSKGVLETYVRENGATICVL FT HQTKSDLAKHLRLKGIWNKSVITQDLLVLAGVFAGGIWMVFSGAKESFEQTVKHQGKEK FT RQRQKLKFRQARDRKLGFEVHADDGTIEHYFGSAYTAKGKQKGKVTGMGAKNRKFINMY FT GFDPTEYSFVRFVDPLTGLVFDDSPYTDIQLVQEKIGDARHKAILEDKLSRERVSYNPG FT VSAYYINEITNAALKVDLTPHNPLLACERHSTIAGHPDHEGELRQTGSAVKIDIRDVPE FT NPEEASLVGHESKSLFRGLRDYNPIASVICHLVNEADGRTSDSYGIGYGGLIITNRHLF FT KRNNGTLTIRSRHGEFVIKNTTQLGMKPCAERDILIIKMPKDIPPFPQRLQFRVPKENE FT RICLVGSNFQDKSITSTVSETSVTCHVSNSHFWKHWIDTKDGHCGLPLVSTVDGAILGV FT HSLSNLTNTQNFFAAVPANFEIDYLKTPEATEWIKKWSYNPSEICWGTLELKTGQPVSP FT FKVTKLITDLDSVQVYAQARSDKWVLDRLYGNLKAVGQCPAQLVTKHVVKGKCMLFDLY FT LQQDHDVRSFFKPLMGAYGKSRLNKEAYNKDLFKYATPINAGDVCHKTFEQAELAVVEM FT LKANGFHKCNYITDPEEIVKALNMKAAVGAMYSGKKKDYFDGMSDKDIENLLFHSCKRL FT YMGQKGLWNGSLKAELRPMAKVELNKTRTFTAAPLDTLLGGKTCVDDFNNMFYNNHLKC FT PWTVGITKFYQGWDRLLTSLPENWIYCDADGSQFDSSLSPYLINAVLNIRREFMEEWDI FT GDQMLRNLYTEIVYTPILTPDGTIVKKFKGNNSGQPSTVVDNTLMVVLAVYYTLLKLGV FT SEFEISERCVFFANGDDLLIAMRPDTAHLLDSFGECFAELGLNYDFSSRTTKKEELWFM FT SHCGIKRDGMYIPKLEPERIVSILEWDRSHEPVHRLEAICAAMVEAWGYDELLHQIRKF FT YAWVLGQAPYSELARTGKAPYIAETALKSLYTGVQPSTDDLSEYTRVLNEMYDDSLLQD FT NDLSVYHQSGNPPEFKDAGANPPAPKPKGAYTAPEITEVTEPEDPKQAALREARQKQPA FT VIPESYGRDTGEKSMRSVSPQRVKDKDVNVGTTGTFVVPRVKLHTSKMRQPRVNGISVV FT NLQHLATYEPEQHNIGNTRSTQEQFRAWYEGVKGDYGVDDAGMAILLNGLMVWCIENGT FT SPNINGVWTMMDGDEQVTYPIKPLLDHAVPTFRQIMTHFSDVAEAYIEMRNRTKAYMPR FT YGLQRNLTDMSLARYAFDFYELHSTTPARAKEAHMQMKAAALKNAHNRLFGLDGNVSTQ FT EEDTERHTATDVTRNIHNLLGMRGVQ" FT mat_peptide <1..141 FT /product="cytoplasmic inclusion protein" FT /note="CI" FT mat_peptide 142..300 FT /product="6K2 protein" FT mat_peptide 301..876 FT /product="VPg protein" FT mat_peptide 877..1605 FT /product="NIa-Pro protein" FT mat_peptide 1606..3168 FT /product="nuclear inclusion body protein" FT /note="NIb" FT mat_peptide 3169..4107 FT /product="coat protein" FT /note="CP" FT 3'UTR 4111..4331 XX SQ Sequence 4331 BP; 1353 A; 819 C; 1042 G; 1117 T; 0 other; atagctgtac tatcatcagc cagagcgcaa ctcctcgaat ttgacaactt aagtatggat 60 gcctcataca acgaaatgag caaaggagta cttgaaacgt atgtgcgtga aaatggtgcc 120 accatttgtg tattgcacca aacaaaaagt gatctcgcga agcatctacg gcttaagggc 180 atttggaata aatccgtgat aacacaggac cttctagtgc tagcaggagt ttttgctggt 240 ggtatatgga tggtgttttc gggtgcaaaa gaatcttttg agcagacagt taaacaccaa 300 ggaaaagaga aaagacaaag gcaaaagttg aagttccggc aagctcgtga taggaaacta 360 ggttttgagg ttcacgcaga tgatggtaca attgaacatt actttggaag tgcctatacc 420 gcgaaaggaa aacagaaagg aaaggttacg ggtatggggg cgaagaacag gaagttcata 480 aatatgtatg gcttcgaccc gactgagtat tcttttgtga gatttgtgga tccgttgaca 540 ggattggtgt ttgatgactc accatacaca gatattcaac tggtccaaga aaagattggt 600 gatgcgaggc ataaggcaat acttgaggat aagctttccc gagagagggt atcatacaat 660 cccggagtta gtgcatatta tatcaatgag attacaaatg cggcactgaa ggtagatctc 720 acaccacata acccattact tgcatgtgag agacatagca caatagctgg gcatccagat 780 catgagggtg agttacgaca aactggctct gctgttaaga ttgatattag agacgtgccg 840 gagaacccag aagaagcatc acttgtggga catgagagca aatccctttt caggggtttg 900 agggactaca atccaattgc aagtgtaata tgccatttag tgaatgaagc agacggtagg 960 acaagtgatt catatggcat tggatatggc ggtctaatca tcacgaatag acatctattc 1020 aagcgtaata atggaactct cacaatacgc tcgcgacatg gagaattcgt gattaagaac 1080 accactcagc tgggtatgaa accatgtgct gaacgtgaca tattgataat aaagatgccc 1140 aaagacatcc caccttttcc acagagactt cagtttaggg ttcccaagga gaatgagcgc 1200 atttgtctag taggttcaaa ctttcaagac aaatctatca caagcactgt ctctgaaacg 1260 agtgtcacat gtcacgtatc aaactcacat ttttggaagc attggataga tacaaaagac 1320 gggcattgtg gcttacctct tgtaagcaca gttgatggag cgattctggg ggttcatagt 1380 ttgtcaaatc tcacaaacac ccaaaacttc ttcgcagctg tcccagcaaa ttttgagatt 1440 gattatttaa aaacgcccga ggcgacagaa tggattaaga aatggagtta caacccgagc 1500 gaaatctgtt gggggacttt ggagcttaag acaggacaac cagtttcacc ttttaaagtc 1560 accaagttga taacagatct tgacagtgtg caagtgtatg ctcaagcacg ctcagacaaa 1620 tgggtgttag acaggttgta tgggaatttg aaagctgtgg gacagtgtcc agcgcagctt 1680 gttacaaaac acgttgtgaa gggaaagtgt atgctctttg atttgtatct acaacaagat 1740 catgatgtta gaagcttttt caaacctttg atgggagcat atgggaagag tagattgaac 1800 aaggaagcat acaacaagga tttattcaag tatgcaactc caatcaatgc aggggatgtg 1860 tgtcacaaaa catttgagca ggcagagcta gcagttgtcg agatgctcaa agcaaatggt 1920 tttcataagt gtaactacat cacagatccg gaggaaattg tcaaggcact caacatgaaa 1980 gcagctgtcg gagcaatgta tagtggaaag aagaaagact attttgatgg tatgagcgac 2040 aaggatatcg aaaatcttct ctttcacagc tgtaagcggt tgtacatggg gcagaaagga 2100 ctttggaatg gttccttaaa ggctgagctc aggcccatgg caaaagttga attgaacaag 2160 acaagaactt ttacagcggc cccacttgac actcttttgg gtggtaaaac atgtgttgat 2220 gatttcaaca acatgtttta caataaccat ctcaagtgcc catggacagt aggcattaca 2280 aaattctatc aaggatggga tcgattgtta acatctttac ctgaaaattg gatttattgt 2340 gatgcagatg gttcgcaatt tgacagctct ctgtcaccct accttattaa tgctgtcctc 2400 aatatacgaa gggaattcat ggaagagtgg gacatagggg accaaatgct ccgaaatttg 2460 tacacagaga ttgtatatac gcctattcta acaccagatg gaaccatagt gaagaagttt 2520 aaaggaaata acagtgggca gccatcaacc gtcgtagaca atacacttat ggttgtgttg 2580 gccgtctatt acactttgtt gaaattgggt gtttcagagt tcgagatcag tgaacggtgt 2640 gtattctttg caaatgggga tgatctactg atagctatga gaccagatac agcccatctt 2700 ttggatagct tcggtgagtg ctttgctgag cttgggctta actatgactt ctcatcaagg 2760 acaaccaaga aagaggaatt atggttcatg tctcattgtg gaatcaaacg agatggaatg 2820 tacattccca aactcgagcc tgaacgaata gtatctattc ttgaatggga tagatcacat 2880 gagcctgtac acagacttga ggcaatttgt gctgcaatgg tggaagcgtg gggctacgat 2940 gaacttctcc accaaattag aaaattttat gcatgggtct taggacaagc accatacagt 3000 gaactagcac gaactggaaa ggccccatat attgctgaaa ctgcacttaa atctctgtac 3060 actggagtac aacctagcac tgacgatctc agcgagtaca cgcgtgttct taacgagatg 3120 tatgatgata gccttctcca agacaatgac ttatcggtat atcatcaatc tggcaacccc 3180 cctgaattta aagatgcggg cgcaaaccca ccagcaccaa aaccaaaagg ggcatataca 3240 gcaccagaaa tcacagaggt tactgagccg gaggatccca aacaagctgc gcttcgtgaa 3300 gctagacaga aacaacctgc tgtcatacct gaatcatacg gtagagacac aggtgagaaa 3360 tctatgcgct ctgtttcacc acaaagggtg aaagacaagg atgtcaacgt tggcacgaca 3420 ggcacatttg tggtgccacg agttaaactc catactagca aaatgcggca acctagagtt 3480 aatggaatct ctgtagtaaa tttacaacac ctcgcaactt atgaacctga gcaacataac 3540 attgggaata cacgctcaac tcaggaacag tttcgagcat ggtatgaagg tgttaagggt 3600 gattatggtg ttgatgatgc tggaatggca atcttgttga atggattgat ggtatggtgc 3660 atagagaatg gaacatctcc gaatataaat ggcgtttgga cgatgatgga tggggatgaa 3720 caagtgacgt accccataaa gccattactg gatcatgcag tgcctacttt caggcaaatc 3780 atgacacact tcagtgacgt tgctgaagcg tatatagaaa tgagaaatcg caccaaggca 3840 tatatgccta ggtatggatt acaacgtaac ttgactgata tgagtcttgc gcgatatgca 3900 tttgatttct atgagctgca ctcaacaaca cctgcacgtg ctaaagaggc acacatgcag 3960 atgaaagcag ctgcacttaa gaatgcgcat aatcggttgt ttggtttgga tggaaacgtc 4020 tccacgcaag aagaggatac ggagaggcac acagcgactg atgttactag aaatatacat 4080 aacctcttag gaatgagggg tgtgcagtag gtgaaacttt gcactgtatt tatttactta 4140 tgtggtttta gtatgccttt atttaaattc gtgtccttca gtcccgacag agatggttga 4200 gtgtatcggc agagtgggct tttagcctgg tctatgcact tgagaagttt ctggtctatt 4260 acgtatcata agggactctt aaaagtgagg agtacctcgt aagaaaagcc tttttggttc 4320 gtgatcgagc c 4331 //