ID   EF155968; SV 1; linear; genomic RNA; STD; VRL; 1578 BP.
XX
AC   EF155968;
XX
DT   31-DEC-2012 (Rel. 115, Created)
DT   30-DEC-2016 (Rel. 131, Last updated, Version 2)
XX
DE   Sweet potato chlorotic fleck virus isolate KINT2 coat protein (CP) and
DE   putative nucleic acid binding protein (NB) genes, complete cds.
XX
KW   .
XX
OS   Sweet potato chlorotic fleck virus
OC   Viruses; Riboviria; Tymovirales; Betaflexiviridae; Quinvirinae; Carlavirus.
XX
RN   [1]
RC   Publication Status: Online-Only
RP   1-1578
RX   PUBMED; 28005969.
RA   Tugume A.K., Mukasa S.B., Valkonen J.P.;
RT   "Mixed Infections of Four Viruses, the Incidence and Phylogenetic
RT   Relationships of Sweet Potato Chlorotic Fleck Virus (Betaflexiviridae)
RT   Isolates in Wild Species and Sweetpotatoes in Uganda and Evidence of
RT   Distinct Isolates in East Africa";
RL   PLoS One 11(12):E0167769-E0167769(2016).
XX
RN   [2]
RP   1-1578
RA   Tugume A.K., Cuellar W.J., Mukasa S.B., Valkonen J.P.T.;
RT   ;
RL   Submitted (30-NOV-2006) to the INSDC.
RL   Department of Applied Biology, University of Helsinki, P.O. Box 27
RL   (Latokartanonkaari 7), Helsinki FIN-00014, Finland
XX
DR   MD5; d1d9f0232c4ac7788b9e57fbc17bab85.
DR   EuropePMC; PMC5179071; 28005969.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1578
FT                   /organism="Sweet potato chlorotic fleck virus"
FT                   /host="Ipomoea cairica"
FT                   /isolate="KINT2"
FT                   /mol_type="genomic RNA"
FT                   /country="Uganda:Mpigi"
FT                   /isolation_source="leaf"
FT                   /db_xref="taxon:263004"
FT   gene            29..1141
FT                   /gene="CP"
FT   CDS             29..1141
FT                   /codon_start=1
FT                   /gene="CP"
FT                   /product="coat protein"
FT                   /db_xref="GOA:K9J8W2"
FT                   /db_xref="InterPro:IPR000052"
FT                   /db_xref="InterPro:IPR013569"
FT                   /db_xref="UniProtKB/TrEMBL:K9J8W2"
FT                   /protein_id="ABO92965.1"
FT                   /translation="MFAGESQKQFKERLDKYSRIRREARDEGKSSSEVKALLDLEVEED
FT                   KKRFAHKEPTKNNSPQVFQSHILGAPMAAREADTMDKVESSKGKEKAGGQTTTLEGLNE
FT                   VKAAQGEISDQQLMRHDALIKWYMENYRPSDVVNPLMQSGDKHVTLSDNLKEDAANIYS
FT                   RPNFNTLLKWNREPVSQSIATAEDIAHIEAMLVGLGIPQERVRTAILDIVLYAAHSSSS
FT                   PQQLYEGDIDFRDANFKEAISRSSVAAVIKDKSTIRKVCRLFAPVVWSYMIINNEPPSG
FT                   WQAKGFPENAKFAAFDTFDFVTNNAAIKPLEGIARPPNSVEYIAAQTSKRILIDKARRN
FT                   EKLSNYEASVTGGQQACEIKTELKGNGKCK"
FT   gene            1125..1526
FT                   /gene="NB"
FT   CDS             1125..1526
FT                   /codon_start=1
FT                   /gene="NB"
FT                   /product="putative nucleic acid binding protein"
FT                   /db_xref="UniProtKB/TrEMBL:K9J8V6"
FT                   /protein_id="ABO92966.1"
FT                   /translation="MGSASERPPNFVATFLYGRGLLCDWDCCLLISSVVSNYNKGMRTY
FT                   KFFACGQSKSAIKRRARRMQICPRCAKYECGKRCEPNTYSQFQVKELVTVGVNRYTTEN
FT                   ITKKGTNVRRHCKNELEFIKYESLKVKPK"
XX
SQ   Sequence 1578 BP; 508 A; 293 C; 403 G; 374 T; 0 other;
     gtctttaggt tgtgagactt aaattgaaat gtttgctggg gagagtcaga aacagtttaa        60
     agaaagattg gacaaatata gtaggatcag gagagaggca agagatgagg ggaagagtag       120
     ctctgaggtg aaggcgctgt tagatctaga agtagaagag gacaagaaga gatttgcaca       180
     caaggagcct accaagaaca actcacctca agtgtttcaa agtcacatac ttggagcacc       240
     tatggcggcg agggaggctg atacaatgga taaagtggaa tcaagcaaag gtaaggagaa       300
     agcgggaggg caaacaacca cacttgaagg actgaatgag gtaaaggccg ctcagggcga       360
     gatatccgat cagcaattaa tgaggcatga tgcattgatc aagtggtaca tggaaaacta       420
     cagaccttct gatgtagtta atcctctcat gcaaagtgga gataagcacg tgacactcag       480
     cgacaatttg aaggaggatg cagctaacat atatagcagg cccaatttca acactcttct       540
     aaagtggaac agggagcccg tgagtcaaag cattgcaaca gctgaggata tagcccatat       600
     tgaagcgatg cttgttggtt tgggcatacc acaagagaga gtgaggacag ccattctgga       660
     tattgttctc tatgctgctc actcaagctc ctcacctcaa caactgtatg agggtgacat       720
     agactttcgc gatgcgaact tcaaagaggc tatatctaga tcctctgtgg ccgcagtaat       780
     caaggacaaa tccacaatta gaaaagtctg tcgccttttt gcacctgtgg tttggagcta       840
     tatgataatc aacaatgaac ccccatcagg gtggcaggct aaaggcttcc cagagaatgc       900
     aaagttcgct gccttcgaca cttttgattt cgtgacaaac aatgccgcta tcaaacccct       960
     tgagggcata gctagacccc cgaattctgt ggaatacata gctgctcaaa caagcaagag      1020
     gatccttatt gacaaggctc gtaggaatga gaagctcagc aattatgagg cgagcgtgac      1080
     aggagggcag caagcatgtg aaatcaagac cgagcttaaa ggtaatggga agtgcaagtg      1140
     agagacctcc aaatttcgta gctacctttc tttatggccg cgggctgttg tgtgattggg      1200
     attgttgtct tttgatttct agtgtggtta gtaactacaa taagggcatg agaacctaca      1260
     agttcttcgc ttgtggccaa tcaaaatcgg ccattaagcg gagggctagg aggatgcaaa      1320
     tttgccccag gtgtgctaaa tatgagtgtg gtaagaggtg tgaaccaaac acctatagtc      1380
     agtttcaggt gaaggaattg gtcactgttg gtgtgaatag gtacactacc gaaaacatca      1440
     caaagaaagg gaccaatgtc cgacgccatt gtaaaaatga attagaattt ataaaatatg      1500
     aaagtcttaa ggtaaagcct aaataataaa taaaccatta ggactataaa ctttgcatgt      1560
     tttaaagtac ttttgagc                                                    1578
//