ID   EF155967; SV 1; linear; genomic RNA; STD; VRL; 1578 BP.
XX
AC   EF155967;
XX
DT   31-DEC-2012 (Rel. 115, Created)
DT   30-DEC-2016 (Rel. 131, Last updated, Version 2)
XX
DE   Sweet potato chlorotic fleck virus isolate 4MBL coat protein (CP) and
DE   putative nucleic acid binding protein (NB) genes, complete cds.
XX
KW   .
XX
OS   Sweet potato chlorotic fleck virus
OC   Viruses; Riboviria; Tymovirales; Betaflexiviridae; Quinvirinae; Carlavirus.
XX
RN   [1]
RC   Publication Status: Online-Only
RP   1-1578
RX   PUBMED; 28005969.
RA   Tugume A.K., Mukasa S.B., Valkonen J.P.;
RT   "Mixed Infections of Four Viruses, the Incidence and Phylogenetic
RT   Relationships of Sweet Potato Chlorotic Fleck Virus (Betaflexiviridae)
RT   Isolates in Wild Species and Sweetpotatoes in Uganda and Evidence of
RT   Distinct Isolates in East Africa";
RL   PLoS One 11(12):E0167769-E0167769(2016).
XX
RN   [2]
RP   1-1578
RA   Tugume A.K., Cuellar W.J., Mukasa S.B., Valkonen J.P.T.;
RT   ;
RL   Submitted (30-NOV-2006) to the INSDC.
RL   Department of Applied Biology, University of Helsinki, P.O. Box 27
RL   (Latokartanonkaari 7), Helsinki FIN-00014, Finland
XX
DR   MD5; 23700d1d13cc460cc19fcaa163c321bb.
DR   EuropePMC; PMC5179071; 28005969.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1578
FT                   /organism="Sweet potato chlorotic fleck virus"
FT                   /host="Ipomoea indica (Ipomoea acuminata)"
FT                   /isolate="4MBL"
FT                   /mol_type="genomic RNA"
FT                   /country="Uganda:Mbale"
FT                   /isolation_source="leaf"
FT                   /db_xref="taxon:263004"
FT   gene            29..1141
FT                   /gene="CP"
FT   CDS             29..1141
FT                   /codon_start=1
FT                   /gene="CP"
FT                   /product="coat protein"
FT                   /db_xref="GOA:K9J8U5"
FT                   /db_xref="InterPro:IPR000052"
FT                   /db_xref="InterPro:IPR013569"
FT                   /db_xref="UniProtKB/TrEMBL:K9J8U5"
FT                   /protein_id="ABO92963.1"
FT                   /translation="MFAGESQEQFKERLDKYNRIRREARDEGKSSSEVKALLDLEVEED
FT                   KKRFAHKEPTKNNSPQVFQSHILGAPMAAKEADTMDKVESSKGKEKAGGQTTTLEGLNE
FT                   VKAAQGEISDQQLMRHDALIKWYMENYRPSDVVNPLMQSGDKHVTLSDNLKEDAANIYS
FT                   RPNFNTLLKWNREPVSQSIATAEDIAQIEAMLVGLGIPQERVRTAILDIVLYAAHSSSS
FT                   PQQLYEGDIDFRDANFKEAISRSSVAAVIKDKSTIRKVCRLFAPVVWSYMIINNEPPSG
FT                   WQAKGFPENAKFAAFDTFDFVTNHAAIKPLEGIARPPNSVEYIAAQTSKRILIDKARRN
FT                   EKLSNYEASVTGGQQACEIKTELKGNGKCK"
FT   gene            1125..1526
FT                   /gene="NB"
FT   CDS             1125..1526
FT                   /codon_start=1
FT                   /gene="NB"
FT                   /product="putative nucleic acid binding protein"
FT                   /db_xref="UniProtKB/TrEMBL:K9J8U3"
FT                   /protein_id="ABO92964.1"
FT                   /translation="MGSASERPPNFVATFLYGRGLLCDWDCCLLISSVVSNYNKGMRTY
FT                   KFFACGQSKSAIKRRARRMQICPRCAKYECGKRCEPNTYSQLQVKELVTVGVNRYTTEN
FT                   ITKKGTNVRRHCKNELEFIKYESLKVKPK"
FT   3'UTR           1527..1578
XX
SQ   Sequence 1578 BP; 509 A; 296 C; 401 G; 372 T; 0 other;
     gtctttaggt tgtgagattt aaattgaaat gtttgctggg gagagtcagg aacagtttaa        60
     agaaagattg gacaaatata atagaatcag gagagaggca agagatgagg ggaagagtag       120
     ctctgaggtg aaagcgctgt tagatctaga agtagaagag gacaagaaga gatttgcaca       180
     caaggagcct accaagaaca actcacctca agtgtttcaa agtcacatac ttggagcacc       240
     tatggcggcg aaggaggctg atacaatgga taaagtggaa tcaagcaaag gtaaggagaa       300
     agcgggaggg caaacaacca cacttgaagg actgaatgag gtgaaggccg ctcagggcga       360
     gatatccgat cagcaattaa tgaggcatga tgcattgatc aagtggtaca tggaaaacta       420
     cagaccttct gatgtagtta atcctctcat gcaaagtgga gataagcacg tgacactcag       480
     cgacaatttg aaggaggatg cggctaacat atatagtagg cccaatttca acactcttct       540
     aaagtggaac agggagcccg tgagtcaaag cattgcaaca gctgaagata tagcccaaat       600
     tgaagcgatg cttgttggtt tgggcatacc acaagagaga gtgaggactg ccattctgga       660
     tattgttctc tatgctgctc actcaagctc ctcacctcaa caactgtatg agggtgacat       720
     agattttcgc gatgcgaatt tcaaagaggc catatctaga tcctctgtgg ccgcagtaat       780
     caaggacaaa tccacaatta gaaaagtctg tcgccttttt gcacctgtgg tctggagcta       840
     tatgataatc aacaatgaac ccccatcagg gtggcaggcc aaaggcttcc cagagaatgc       900
     aaagttcgct gccttcgata cttttgactt cgtgacaaac catgccgcta tcaaacccct       960
     tgagggcata gctagacccc cgaattctgt ggaatacata gctgctcaaa caagcaagag      1020
     gatccttatt gacaaggctc gcaggaatga gaagctcagc aactatgagg cgagcgtgac      1080
     aggagggcag caagcatgtg aaatcaagac cgagcttaaa ggtaatggga agtgcaagtg      1140
     agagacctcc aaatttcgta gctacctttc tttatggccg cggactgtta tgtgattggg      1200
     attgttgtct tttgatttct agtgtggtta gtaactacaa taagggcatg agaacctaca      1260
     agttcttcgc ttgtggccaa tcaaaatcgg ccattaagcg gagggctagg aggatgcaaa      1320
     tttgccccag gtgtgctaag tatgagtgtg gtaagaggtg tgaaccaaac acctatagtc      1380
     agcttcaggt gaaggaattg gtcactgttg gtgtgaatag gtacactacc gaaaacatca      1440
     caaagaaagg gaccaatgtc cgacgccatt gtaagaatga attagaattt ataaaatatg      1500
     aaagtcttaa ggtaaagcct aaataataaa taaaccatta ggactataaa ctttgcatgt      1560
     tttaaagtac ttttgagc                                                    1578
//