ID EF153735; SV 1; linear; genomic RNA; STD; VRL; 2386 BP. XX AC EF153735; XX DT 10-JAN-2007 (Rel. 90, Created) DT 26-JAN-2009 (Rel. 99, Last updated, Version 2) XX DE Tomato aspermy virus isolate Kolkata segment RNA3, complete sequence. XX KW . XX OS Tomato aspermy virus OC Viruses; Riboviria; Bromoviridae; Cucumovirus. XX RN [1] RP 1-2386 RA Raj S.K., Kumar S., Choudhari S.; RT "Identification of Tomato aspermy virus as the cause of yellow mosaic and RT flower deformation on chrysanthemums in India"; RL Australas. Plant Dis. Notes 0:0(2007). XX RN [2] RP 1-2386 RX DOI; 10.1111/j.1439-0434.2008.01476.x. RX AGRICOLA; IND44147337. RA Raj S.K., Kumar S., Choudhari S., Verma D.K.; RT "Biological and Molecular Characterization of Three Isolates of Tomato RT aspermy virus Infecting Chrysanthemums in India"; RL J. Phytopathol. 157(2):117-125(2009). XX RN [3] RP 1-2386 RA Raj S.K., Choudhari S., Kumar S., Pratap D.; RT ; RL Submitted (30-NOV-2006) to the INSDC. RL Molecular Virology, National Botanical Research Institute, Rana Pratap RL Marg, Lucknow, U.P. 226 001, India XX DR MD5; d2f9997ace6312e075a82f2b3f8abc1a. DR EuropePMC; PMC3550809; 23730005. DR RFAM; RF01084; TLS-PK3. XX FH Key Location/Qualifiers FH FT source 1..2386 FT /organism="Tomato aspermy virus" FT /segment="RNA3" FT /host="Chrysanthemum morifolium" FT /isolate="Kolkata" FT /mol_type="genomic RNA" FT /country="India" FT /note="synonym: Chrysanthenum aspermy virus" FT /db_xref="taxon:12315" FT CDS 192..932 FT /codon_start=1 FT /product="movement protein" FT /note="3a" FT /db_xref="InterPro:IPR000603" FT /db_xref="UniProtKB/TrEMBL:Q8UZ39" FT /protein_id="ABM46609.1" FT /translation="MATKCDLGRHHWMRADNAVCVRPLVPETTSNLLTRWFVSGYEAGE FT LPSKGYMSVPQVLCAVTRTVTSDAEGSLRIYLADLGDKERAPIDAQVVSLHNRDLPAIV FT SFHPTYDCPMEQLNGVGRCFALVIERYGYIGHNGTTASVCSNWQPKFSSKNNNYKPAAA FT GKTLVLPYDRLSELSGPSAVARLLKSQLNMSASPYFQLPGIPVAQRAIGSESEDLEKST FT GGQPNARVDSEPQVFSKPVVVNGI" FT CDS 1228..1884 FT /codon_start=1 FT /product="coat protein" FT /note="CP; encapsidation of virus" FT /db_xref="GOA:Q88619" FT /db_xref="InterPro:IPR000247" FT /db_xref="InterPro:IPR023800" FT /db_xref="InterPro:IPR037137" FT /db_xref="UniProtKB/TrEMBL:Q88619" FT /protein_id="ABM46610.1" FT /translation="MAQNGTGGGSRRPRRGRRNNNNNNSTARDKALLALTQQVNRLANI FT ASSSAPSLQHPTFIASKKCRAGYTYTSLDVRPTRTEKDKSFGQRLIIPVPVSEYPKKKV FT SCVQVRLNPSPKFNSTIWVSLRRLDETTLLTSENVFKLFTDGLAAVLIYQHVPTGIQPN FT NKITFDMSNVGAEIGDMGKYALIVYSKDDVLEADEMVIHIDIEHQRIPSASTLPV" XX SQ Sequence 2386 BP; 589 A; 556 C; 555 G; 686 T; 0 other; gtttaccaac caaccaacca ctactatcta tctatctgtg tgtgtgtgtg tgtgtgtgtg 60 tgtgtgtgtt gtgtgtgtgt aatcctccta tggtattttc aggtaccagt cggactttaa 120 cacaacagtc ctctgcggca tcaactgatg agctacataa catattattt agccgcagag 180 ccatccaaga gatggcgaca aaatgcgatc tcggtcgcca ccactggatg cgcgccgata 240 atgcggtgtg tgtgcgaccc ctcgttccag aaaccacgtc caatctactg acgcggtggt 300 tcgtctccgg gtatgaagct ggagagttac catccaaggg atatatgagc gtccctcaag 360 ttctttgcgc cgtcaccaga acagtcactt cagatgctga aggttccctt cgcatatatc 420 tagctgatct tggtgataag gaacgtgcac ctatcgatgc acaagtcgtc agcttacata 480 accgcgatct ccctgccatt gtctccttcc atcctactta tgactgtcct atggaacagt 540 tgaatggagt cggtaggtgt tttgcacttg ttatagaaag atacggttat attggacata 600 acggaactac cgcgagcgtg tgtagtaact ggcaaccgaa gttttcttcg aagaataaca 660 attacaagcc agccgccgca ggtaagactc tagtactacc ctatgacaga ttatctgagc 720 tttcgggacc atcagccgta gccagattac tgaaatcgca gctcaatatg tcagcatccc 780 cgtatttcca gttacctggg ataccggtgg ctcaacgtgc gataggtagt gagtctgagg 840 atcttgagaa atcgacagga ggccaaccta acgctagggt tgattctgaa ccgcaggtgt 900 tttcaaagcc ggttgtggtg aacggtattt gagcctgttg ttatatatat atgtgtattt 960 gtgttatgtg tatagtatat atatacaagt gtaaatcgtt gtgttgtaga ttgatcactt 1020 gagttccatg gattgggaag ggtacacatc tggtttatca aagcccgtga cattactttt 1080 tgggttcaat tcccattagt ccctgtcagg ttcctttatc ttcacggatg cttctccatg 1140 atgtagcgtt taagtatcaa tctgttgttg tttgtgctta aatttttcac ttattgttag 1200 tgtttcacca ctgtcacaca ctctagaatg gcccaaaacg gtacgggagg aggaagccga 1260 cgtccacgtc gtggtcgtcg taataataac aacaacaact cgactgctcg tgataaagct 1320 cttttggctt tgacgcagca agtcaatcgc ttagcgaata tagcttcctc tagtgcgcca 1380 tcccttcaac atccgacttt tattgctagc aagaagtgtc gcgcaggtta tacttacact 1440 tcgttggatg ttcgaccgac tagaactgag aaggacaaga gtttcggtca aaggttaatt 1500 atccctgtac ccgtgtctga atatcctaag aagaaggtct catgtgtgca agtgagactg 1560 aacccatccc caaagttcaa ttctacgatt tgggtctcgc ttcgtcgtct ggacgaaacg 1620 actcttctta cttctgaaaa cgtgtttaaa ttgttcaccg acggccttgc ggccgtcctt 1680 atctatcaac acgttcccac cggtattcaa cctaacaata agatcacctt cgacatgtct 1740 aatgtcggtg ctgagatcgg cgatatgggt aaatatgccc taatagtcta ttctaaagac 1800 gatgtcctcg aagccgatga aatggtgatc cacatcgata tagagcacca gcgtattcct 1860 tccgcttcaa cgctcccggt gtgattcgac acgcatgcac gacgtccgaa gacgttaaac 1920 tacgcttgaa ccgtgttcga gtgtctgagt tggtagtatt gctctaaact acctgaagtc 1980 actaaatgct tatgcagtga acgggttgtc catccagcta acggctaaaa tggtcagtca 2040 tatcgtgaga tatgccgtcg gtctacgtcc gaagacgtta aactacgctt gaaccgtgtt 2100 cgagtgtctg agttggtagt attgctctaa actacctgaa gtcactaaat gcttatgcag 2160 tgaacgggtt gtccatccag ctaacggcta aaatggtcag tcatatcgtg agatatgccg 2220 tcggtctttg atcgatgaga tgcctttgaa ccctttatcc cggggttctt cggaaggtga 2280 gacttgaatt ccatgtagag tctcgccgtg cacggtatca caccgatgat accttcagag 2340 tgcaggcatc gcctacggtt ttccgtaggt ccccctaggg gtccca 2386 //