ID   EF141330; SV 1; linear; genomic RNA; STD; VRL; 2157 BP.
XX
AC   EF141330;
XX
DT   14-JAN-2007 (Rel. 90, Created)
DT   05-AUG-2023 (Rel. 144, Last updated, Version 3)
XX
DE   Rice stripe virus isolate JY segment 4, complete sequence.
XX
KW   .
XX
OS   Tenuivirus oryzaclavatae
OC   Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina;
OC   Ellioviricetes; Bunyavirales; Phenuiviridae; Tenuivirus.
XX
RN   [1]
RP   1-2157
RA   Dong Z.;
RT   ;
RL   Submitted (27-NOV-2006) to the INSDC.
RL   College of Life Science, Capital Normal University, Xisanhuan Beilu No.
RL   105, Haidian District, Beijing, Beijing 100037, China
XX
DR   MD5; 93d125bb705fbaad34cd39409f5866f3.
XX
CC   GenBank Accession Numbers EF141327-EF141330 represent the complete
CC   genome of Rice stripe virus isolate JY.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2157
FT                   /organism="Tenuivirus oryzaclavatae"
FT                   /segment="4"
FT                   /isolate="JY"
FT                   /mol_type="genomic RNA"
FT                   /isolation_source="infected rice leaves"
FT                   /db_xref="taxon:3052763"
FT   CDS             55..591
FT                   /codon_start=1
FT                   /product="major non-capsid protein"
FT                   /note="disease-specific protein"
FT                   /db_xref="InterPro:IPR006960"
FT                   /db_xref="UniProtKB/TrEMBL:A2I7L9"
FT                   /protein_id="ABM55685.1"
FT                   /translation="MQDVQRTIEVSVGPIVGLDYTLLYDTLPETVSDNITLPDLKDPER
FT                   VTEDTKKPILKGCVYIAYHHPLETDTLFIKVHKHIPEFCHSFLSHLLGGEDDDNALIDI
FT                   GLFFNMLQPSLGGWITKNFLRHPNRMSKDQIKMLLDQIIKMAKAESSDTEEYEKVWKKM
FT                   PTYFESIIQPLLHKT"
FT   CDS             complement(1247..2107)
FT                   /codon_start=1
FT                   /product="VCP4"
FT                   /note="putative 30K movement protein; 32 kDa protein"
FT                   /db_xref="GOA:A2I7M0"
FT                   /db_xref="InterPro:IPR004980"
FT                   /db_xref="UniProtKB/TrEMBL:A2I7M0"
FT                   /protein_id="ABM55686.1"
FT                   /translation="MALSRLLSTSKSKVLYDDLSEESQKRVDNKNRKSLALSKRPLNQG
FT                   RVTIDQAATMLGLEPFSFSDVKVNKYDMFIAKQDYSVKAHRKATFNILVDPYWFHQPLT
FT                   HYPFFRVATFAMVWIGIKGRASGITTLRIIDKSYVNPSDQIEVEVRYPISKNFAVLGSL
FT                   ANFLALEDKHNLQVSVSVDDSSVQNCVISRTLWFWGIERTDLPVSMKTNDTVMFEFEPL
FT                   EDKAINHLSSFSNFTTNVVQKAVGGAFTSKSFPELDTEKEFGVVKQPKKIPITKKSKSE
FT                   VSVIM"
XX
SQ   Sequence 2157 BP; 693 A; 444 C; 405 G; 615 T; 0 other;
     acacaaagtc cagggcattt gtacaacgat ccagcaattt aatcagaatc gaagatgcaa        60
     gacgtacaaa ggacaataga agtttctgta ggtcctattg taggcctaga ttacactcta       120
     ttgtatgaca ctctgcccga gactgttagc gacaacatta ctctacctga tttgaaagat       180
     ccagagagag tcacggaaga tactaagaag ccaatactca aaggctgtgt ttacatagca       240
     tatcatcacc ccttggaaac tgacaccctt ttcatcaaag ttcacaaaca tataccagag       300
     ttttgtcact cattcctatc acacctttta ggaggtgaag atgatgacaa tgctcttata       360
     gacattggtc tgtttttcaa catgttgcaa ccctctttgg gtggttggat aaccaagaat       420
     tttcttagac accctaacag gatgtctaag gaccaaatta aaatgcttct ggatcagatt       480
     atcaagatgg ctaaggctga gagctcagac acagaagagt atgagaaagt gtggaagaag       540
     atgccaactt attttgaatc aattatccaa cctcttctac acaagacata gtttattgca       600
     tatcacattt tccacccacg agtgcttgca ttctagaagt ggagccagtt tgggttgacc       660
     atcttgtgtg aaaatacgag tatattatag tctaaacaat atacatgatg tttgtccact       720
     taatcttgac agtttgtaaa taattgtgtg tggttgtgcg tgtgagtata tatgttaata       780
     tataactgtg cacaggtgtg tggatataaa cacttgaaac aaatacatta aaataatcct       840
     atcaactcat atacatactt gtgagtctta gctcctctat atacacacat agaaacatga       900
     gagtatcata caagacccat tacaaaaata ctaacaactt tgtttttgca atgtcaaaac       960
     taaaaactga aataccaaaa acatgagaaa atagaaaatc aaaaacaatg aatggtgcta      1020
     agcaccacat ccggatgtgg tgcgtagcac cattgtcata acattaatct ataacctact      1080
     tgtagcaaaa acacccatat gcatgaagtg catagcactc tcttatagat tgactactat      1140
     gattacgtga atgcatagca ttctcctggg gaaaaagcag agcagaacag accacatcaa      1200
     gtgcgtagca ctagatgtta gcatactccg gaactggtta tctcacctac atgatgacag      1260
     aaacttcaga ttttgatttc tttgtgatgg gtatcttctt tggctgcttc accacaccga      1320
     actccttctc agtgtctagc tcagggaagc tcttgctggt gaaagcacct ccaacagctt      1380
     tctgaacaac attagtagta aaattactga agcttgacaa atggtttata gccttatctt      1440
     ctagtggttc aaattcaaac atcacagtgt cattggtctt catggacact ggcagatcgg      1500
     tcctctcaat cccccagaac caaagagttc tagagatgac acagttctgc actgagctgt      1560
     catcaacaga tacggacact tgaagattat gcttatcctc caaagccaga aaattcgcta      1620
     gagaacccaa gacagcaaaa ttcttgctaa ttgggtagcg aacctctacc tcaatttgat      1680
     ctgaggggtt cacataggac ttgtctatta tgcggagagt ggttattcca ctagctctac      1740
     ccttaattcc aatccaaacc atagcaaaag ttgccactct aaagaatggg taatgggtga      1800
     gaggttgatg gaaccaatat ggatcaacaa gtatgttgaa agttgctttc ctatgggcct      1860
     tcacagaata gtcctgtttg gctatgaaca tatcatactt gttcaccttg acatctgaga      1920
     agctgaaggg ttccaatcca agcattgtag cagcttggtc aatcgtaacc ctaccctggt      1980
     tcagaggcct cttggagaga gctagagatt tcctattctt attatcaact ctcttttggg      2040
     actcctcact aaggtcatca tagagtacct tactttttga agtggacaaa agtcgagaca      2100
     aagccataat taaagtatat attagcttaa tctcaaaaga tatgccatga cttgtgt         2157
//