ID EF141329; SV 1; linear; genomic RNA; STD; VRL; 2476 BP. XX AC EF141329; XX DT 14-JAN-2007 (Rel. 90, Created) DT 05-AUG-2023 (Rel. 144, Last updated, Version 3) XX DE Rice stripe virus isolate JY segment 3, complete sequence. XX KW . XX OS Tenuivirus oryzaclavatae OC Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; OC Ellioviricetes; Bunyavirales; Phenuiviridae; Tenuivirus. XX RN [1] RP 1-2476 RA Dong Z.; RT ; RL Submitted (27-NOV-2006) to the INSDC. RL College of Life Science, Capital Normal University, Xisanhuan Beilu No. RL 105, Haidian District, Beijing, Beijing 100037, China XX DR MD5; 48e91b58f1a6f5c9938dc3d92c7a3e71. XX CC GenBank Accession Numbers EF141327-EF141330 represent the complete CC genome of Rice stripe virus isolate JY. XX FH Key Location/Qualifiers FH FT source 1..2476 FT /organism="Tenuivirus oryzaclavatae" FT /segment="3" FT /isolate="JY" FT /mol_type="genomic RNA" FT /isolation_source="infected rice leaves" FT /db_xref="taxon:3052763" FT gene 66..701 FT /gene="NS3" FT CDS 66..701 FT /codon_start=1 FT /gene="NS3" FT /product="putative replication protein" FT /db_xref="InterPro:IPR007974" FT /db_xref="UniProtKB/TrEMBL:A2I7L7" FT /protein_id="ABM55683.1" FT /translation="MNVFTSSVGSVEFDHPLLLENDLTSLSINCDDVHCSSRALCYIYD FT IHSSRHPSIDEHQFLRLLHGPDDAITLGSFLKTLIWILSHDKNLPEEYRLPTIMMSSSY FT VKFFTEVKPRPPSTNCWTCRMSKDNLPFTVPSVKGFPPDAELYIVPISDHDGKPVKFDN FT RKTLYRSPSKKRHKYVISSDKPPLSARYVKYVDSSALESLPGSSPAVL" FT gene complement(1416..2384) FT /gene="CP" FT CDS complement(1416..2384) FT /codon_start=1 FT /gene="CP" FT /product="coat protein" FT /db_xref="GOA:A2I7L8" FT /db_xref="InterPro:IPR008864" FT /db_xref="InterPro:IPR009522" FT /db_xref="UniProtKB/TrEMBL:A2I7L8" FT /protein_id="ABM55684.1" FT /translation="MGTNKPATLADLQKAINDISKDALSYLTAHKADVVTFAGQIEYAG FT YDAATLIGILKDKGGDTLAKDMTMCITMRYVRGTGFVRDVTKKVKVAAGSTEASTLVSR FT YGIVSSVGTNANAITLGRLAQLSPNVSHEVVRQISGVKMAVGSSDLGLTGCDNLLWDYV FT PQYIKLESETAPYCTTHSLSHILFVVHIIHSFQITKKTMPEGKKKERGLTKDIDMMKYT FT TGLLVITCKSKNLPDKKKEDGRKKVLDEFITNGKVKTTIFDALAGMSVNTISTYGNQTR FT LYLAQQSKLMKILAENTSKTASEVSGLVKEFFEDEAEGADD" XX SQ Sequence 2476 BP; 763 A; 522 C; 429 G; 762 T; 0 other; acacaaagtc ctgggtaaaa tagttatatt tttactatac aatacaattc cgacatcatc 60 taagtatgaa cgtgttcaca tcgtctgtgg gttctgtgga atttgatcat cctctgcttt 120 tagagaatga tctgaccagt ttgagcataa actgtgatga tgtccattgt tcttcaagag 180 ccttatgtta tatatatgac attcattcat ctaggcaccc ttccattgat gagcatcagt 240 ttctgaggct tcttcatggc cctgatgatg ctatcactct aggctccttc ttgaaaactc 300 tgatctggat tctgtcccat gataagaatc tcccagaaga gtacagactt cctactataa 360 tgatgtcatc ctcatatgtg aagttcttca ctgaagtgaa gccaagaccc ccatcaacaa 420 attgctggac atgcagaatg tccaaagaca atttgccctt tactgttcct agtgtcaagg 480 gatttcctcc agatgcagag ctctacattg tgccaatatc tgaccatgat ggaaagcctg 540 tcaaatttga caataggaag actctatata gatcacctag taagaaaagg cataagtatg 600 tcatttcttc tgataaacca cctcttagtg cacgttatgt taagtacgtt gattctagtg 660 cactagaatc cttaccaggc agctctccag ctgtgctgta gaaataaaaa ggaaaaagaa 720 aaaagaaaat aaaacaaaga atcaaaaaaa cacaaaaaaa tcttaaaaaa ggaaaacaaa 780 aaaaccaaaa aaactaaaaa aactaaaaaa catcatgacc taggaaactg cacaccactg 840 attgtctagt gggctctagt tggtagagaa agctatgctt ttgcctaaag ccatgattgg 900 ccaatcctta aaatgtgcta agcacattat ccgaagatgt ctcggatgtt tttttaccta 960 acctaatttt tttgtatttt tatataattt tttgattttt ttgtatttta tatacatatt 1020 tttgtttttt gatttttttg ttttttaata ttttttcttc taattactac attaatatat 1080 ttgattattc atatacttaa aatatatagt atgtattata aaaatagagc aatataataa 1140 agctagtata actacattac aaacatatat ctaaatattt agattgactt atcaaactaa 1200 agactctact agagagtgag taataataat agcaatacat cacacacaaa gcccaaaacc 1260 acacagacaa aataacttat ggaatataat taaaaactaa aatatacaca tataaatata 1320 catattaact tacacctaaa gaaacaacac actgtttgaa gacatgcatc tcccagggag 1380 atatgagatc ccccacaact actgacttgt tcagtctagt catctgcacc ttctgcctca 1440 tcctcgaaga actccttcac caacccgctg acttcagatg ctgtctttga agtgttctca 1500 gcaaggatct tcatcagctt gctctgttga gccaagtaca gccttgtctg attcccataa 1560 gtgctgatcg tattgacaga cataccagcc agcgcatcga agattgtggt cttcactttc 1620 ccattggtga tgaattcatc taagaccttc tttctgccat cttccttctt cttgtcaggc 1680 aggttctttg acttgcatgt gatgaccagg agaccagttg tgtacttcat catgtctatg 1740 tcttttgtca aaccacgctc cttcttctta ccctctggca tggtcttttt ggttatttgg 1800 aaggagtgaa tgatgtgcac aacaaacaaa atgtgactta gggagtgagt tgtgcagtaa 1860 ggagctgttt cactctccag tttgatatat tgtggaacat agtcccacag taagttgtca 1920 catcctgtta gtcccaggtc agaagagccc acagccatct taacaccaga aatttgtctc 1980 acaacttcat gtgagacatt aggggatagc tgagccagcc ttccaagtgt gatggcattg 2040 gcatttgttc ccaccgagga cactatccca taccttgaca ccaaggtcga agcctctgtg 2100 cttccagccg ccactttcac tttcttagtg acatctctca caaagccagt gcctctcaca 2160 tatctcatgg tgatgcacat agtcatatcc ttggccagtg tgtcaccacc tttgtccttc 2220 aatatgccaa tcagagttgc agcatcatag cctgcatact ctatctgacc agcaaaggtc 2280 acaacatcag ctttatgagc agtcaggtaa gacaacgcat ctttggagat gtcattgatt 2340 gccttctgca aatcagctag agtggctggc ttgttggtgc ccattgtagc aagaggtact 2400 ggaggaatgg ttgcggctta gatgaaattt ggaatgtaaa agcaaaatcg aaaattttat 2460 tacccagact ttgtgt 2476 //