ID EF141328; SV 1; linear; genomic RNA; STD; VRL; 3514 BP. XX AC EF141328; XX DT 14-JAN-2007 (Rel. 90, Created) DT 05-AUG-2023 (Rel. 144, Last updated, Version 3) XX DE Rice stripe virus isolate JY segment 2, complete sequence. XX KW . XX OS Tenuivirus oryzaclavatae OC Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; OC Ellioviricetes; Bunyavirales; Phenuiviridae; Tenuivirus. XX RN [1] RP 1-3514 RA Dong Z.; RT ; RL Submitted (27-NOV-2006) to the INSDC. RL College of Life Science, Capital Normal University, Xisanhuan Beilu No. RL 105, Haidian District, Beijing, Beijing 100037, China XX DR MD5; b5b0e7e7aa204bbbe20f85aea48ae6b6. XX CC GenBank Accession Numbers EF141327-EF141330 represent the complete CC genome of Rice stripe virus isolate JY. XX FH Key Location/Qualifiers FH FT source 1..3514 FT /organism="Tenuivirus oryzaclavatae" FT /segment="2" FT /isolate="JY" FT /mol_type="genomic RNA" FT /isolation_source="infected rice leaves" FT /db_xref="taxon:3052763" FT CDS 81..680 FT /codon_start=1 FT /product="NS2" FT /note="putative movement protein" FT /db_xref="GOA:Q89717" FT /db_xref="InterPro:IPR007974" FT /db_xref="UniProtKB/Swiss-Prot:Q89717" FT /protein_id="ABM55681.1" FT /translation="MALLLFNDHYYGFLHKYKRHTGSYDNLFNLRCSKEDHYLNSLDAI FT WLMGCCEEFTDPALRAHALAIATESNIGLVNNNAVISDERLKCWLCKKPSHQQTEHLKL FT ILLPNLVNGFQFATESYHICLKDHSGDDPTQYLSEFSFPTGLRAYYKPHQKMEHKHIVV FT TNGIPISKNFNEIALPDPSPSDDYVLVGAHECPILM" FT CDS complement(980..3484) FT /codon_start=1 FT /product="NSvc2" FT /db_xref="GOA:A2I7L6" FT /db_xref="InterPro:IPR009547" FT /db_xref="UniProtKB/TrEMBL:A2I7L6" FT /protein_id="ABM55682.1" FT /translation="MHFKSYFIYTTIFNMAWDAPIPFPDTHSWMRNREREPSEIVKVPC FT SARAPPCKLTYELNGYFIENGLICYNRASVNYFETCYTGNYDYKLPLHPSFSKFGGHVY FT LSCDDAILQNVSLVGIQQTDYTSSPLLITNSNSEKISYSNLKTGFLGIVYAVETRACIQ FT PDQAKKPEEIINHGVAIKPSCTDGVLYYINSACEVNVSDQTFSIPSCESVKLPTYDDTI FT EVCDKGGCQNVTCHPGEICDKYERMDMIMRIKNYQCSHIYRYSLYPIILFFVIVIIFTL FT ITIMNILFFLKPAFWLLKKVLYSMVGLCHRRPVVDEVSVDMSTVRVVDEAEEGLLVVED FT SIAPNTNVSEKVKRKGRKVENGLIFIPYVLMILLLVCSAESCQDLVSSISNIERCTNNS FT CDFISKMKLTLLNTPQDFCFKTSTDVYKIRFNSVRVMCLSVPLYYTNSFKRVISREEWK FT CFEGEGCRTDGTHSIWGESTSLSFDYCVTDFHIFSYCPAYHYNWKRIEYEPTSSRACTI FT MKCMDTKFEIVGYIQKNGHVLKELGGITSKYDSPLVSISLSNYNSARMPREYAECDGKA FT YLRTANDLGSFDKELLGNIQCPTKEDAVVLSSKCKTKILSNEDLPVIRYIERDGVDMLE FT HVKSEPLKDVLVSSSGISLSTLDLFPVELNLQFKEAITSIITSKISLNGTSCKITGIER FT KFKKTTVSIESSNKVYLSDILACEGLAVCPMILNNIKKGTCITTTYYSVTIGSMIKCKF FT IYSGDTLMCKYDVSPLEITVISPSLDVSSFEAVKTSTTNWMELLAGIVKDNPKLSLVAS FT IIPIGLILKTIRSFLDDIRQVD" XX SQ Sequence 3514 BP; 1060 A; 739 C; 643 G; 1072 T; 0 other; acacaaagtc ctgggtatat aagccacata tatcatataa atctaacaga agtcgtccac 60 ggagaatctc gtcttcagca atggcattac tccttttcaa tgatcactac tatggttttc 120 tccataagta taaaagacac actggatcat atgataatct cttcaatttg aggtgctcta 180 aagaagacca ctatttgaac tctcttgatg ccatctggct catgggatgc tgtgaggagt 240 tcacagatcc agctcttaga gcacatgctc tcgccatagc aactgaatcc aacataggtt 300 tggttaacaa taatgccgtg atatctgatg agaggctgaa gtgctggctc tgtaaaaaac 360 catctcatca acagactgag catctgaaac tgatcttgct acccaatttg gtcaacgggt 420 ttcagtttgc tacagagtca tatcatatat gcctgaagga tcactctgga gatgacccta 480 cacaatatct tagtgagttc tcctttccca caggattaag agcctactac aagccacatc 540 agaagatgga gcataaacat atagttgtga ccaatggaat acccatctca aagaatttca 600 acgaaattgc tctccctgac ccatctccaa gtgatgacta tgtcttggtc ggagcacatg 660 agtgccctat tctaatgtga acttggaaga tgatattgac tgtggcctac aggcacatac 720 acacactggc ctcaaacact aaaatggtgc tatgcatcaa tttataatct tatatcctcg 780 aaatggtgct acgcaccaca tccggatggt gagcctagct cactttgatt attgagtaaa 840 ttaatgaaaa caaacaagta taattgtaac tataatagct ttcttattat tatgtgatca 900 atacgcttaa aactacacac ttaagcttaa gagaagatta ctaatagaaa tatgagaata 960 cataagtgaa cctattggct taatcaacct gtctgatgtc atctagaaaa ctcctaatgg 1020 tcttcaaaat gagtcctatt ggtattattg aagccactag agataacttt gggttatcct 1080 tgactatccc ggctagcaat tccatccaat tggtggtgct ggtcttcaca gcttcaaaag 1140 agctcacatc aaggctcggc gatatcacgg tgatttccag tggtgaaaca tcatacttgc 1200 acataagagt atcgccagag tatatgaatt tgcatttgat catggaacca attgtgaccg 1260 aatagtaagt tgttgttatg catgtgcctt ttttaatgtt gttcagtatc atagggcaaa 1320 ctgccaatcc ctcgcaggcc aagatatcac tgagatagac tttgtttgaa gattcaatgc 1380 ttacagttgt cttcttaaat ttcctctcta taccagttat cttgcatgag gtcccattga 1440 gggatatctt actagttatt atactggtga tcgcttcctt gaattgcaag ttcagctcta 1500 ctggaaacag atccagagtg cttagagata taccagagct agagaccaac acatccttta 1560 agggttcact tttcacatgc tctagcatgt ccactccatc cctctctata tacctaataa 1620 ctggcaaatc ttcatttgaa agtatcttag ttttacactt actgctaaga acaacagcat 1680 cttctttagt tggacactgt atgttgccta gtaactcttt gtcaaaagac cccagatcat 1740 ttgcggtcct taaataagct ttcccatcac actctgcata ttctctaggc attctggcac 1800 tattatagtt tgacaatgat atagaaacta aagggctatc atacttacta gtaatgcctc 1860 ctagttcttt caacacatgt ccattttttt gaatataccc aactatttca aacttagtat 1920 ccatgcactt cataatggtg catgctctag aagatgttgg ttcatattct attctcttcc 1980 aattgtagtg gtatgctggg caataggaaa agatgtggaa atcagtgaca caataatcaa 2040 agctcagact agtggattcc ccccatatcg agtgtgttcc atcagttctg caaccttccc 2100 cttcaaagca cttccattcc tctctagaga tcaccctttt gaaactgttg gtataataca 2160 gaggcactga taagcacata actcgaacac tattaaaacg tattttgtag acatcagtcg 2220 atgtcttgaa gcagaaatcc tgaggagtgt ttagtagggt cagtttcatt ttagagatga 2280 agtcacaact attatttgtg cacctctcta tattggaaat gcttgagaca aggtcttgac 2340 aggattctgc agaacacact aatagtaaga tcatcaatac atatggtatg aatatcagtc 2400 cattctccac ttttctacct ttccttttca ctttctcaga aacattagtg ttaggtgcaa 2460 tggagtcttc tacaactaat aggccctcct ctgcttcatc cactactcta actgttgaca 2520 tatctacaga tacttcatct acaacaggtc tcctatgaca tagcccaacc attgaatata 2580 gcaccttctt tagcagccaa aatgcaggtt ttaggaaaaa taagatattc attatggtga 2640 tgagagtgaa tattattact atgacaaaga acaagattat agggtacaat gaatatctat 2700 agatgtggga gcattgataa ttctttattc tcattatcat gtccattctc tcatacttgt 2760 cacaaatctc tcctgggtga caagttacat tttgacaacc acccttatca caaacttcaa 2820 tagtatcatc ataagttgga agtttgactg attcacaaga agggatagaa aatgtttggt 2880 cactcacatt gacctcacat gcagaattga tgtaatacag cacaccatct gtgcaagagg 2940 gcttgattgc aacaccatga tttatgattt cttctggttt cttagcttgg tcaggttgaa 3000 tgcatgccct agtctcaaca gcatacacta ttcccaagaa accagttttg agatttgagt 3060 atgaaatctt ttcagaattg gaattggtta tcaatagagg gcttgatgtg tagtctgttt 3120 gctgtatgcc taccagagac acattctgca gaatggcatc atcgcaactg agatagacgt 3180 gaccaccgaa cttagagaaa gaaggatgga gaggcagctt gtaatcgtag tttccagtgt 3240 agcatgtctc aaagtaattc acactagccc tgttgtaaca aatcagacca ttttcaatga 3300 aatacccatt cagctcataa gttaatttgc agggaggggc tctggcactg caagggacct 3360 tgacaatctc agatggttcc ctctccctgt tcctcatcca agaatgggtg tcagggaaag 3420 ggattggtgc atcccacgcc atattaaaga ttgtggtgta gatgaaatat gatttaaaat 3480 gcatcttcga agaagttata cccagacttt gtgt 3514 //