ID EF125190; SV 2; linear; genomic DNA; STD; VRL; 2739 BP. XX AC EF125190; XX DT 19-DEC-2006 (Rel. 90, Created) DT 29-MAR-2009 (Rel. 100, Last updated, Version 4) XX DE Ramie mosaic virus isolate F3 segment A, complete sequence. XX KW . XX OS Ramie mosaic virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2739 RA Yang C.X.; RT "Molecular Identification of Tobacco-infecting Begomovirus"; RL Unpublished. XX RN [2] RP 1-2739 RA Wu Z.J., Xie L.H.; RT ; RL Submitted (18-NOV-2006) to the INSDC. RL Institute of Plant Virology, Fujian Agriculture and Forestry University, RL Kingshan Road, Fuzhou, Fujian 350002, China XX DR MD5; 275e0e5108a6be3f1140a7a59350b8ea. XX CC On Dec 18, 2006 this sequence version replaced gi:119387898. XX FH Key Location/Qualifiers FH FT source 1..2739 FT /organism="Ramie mosaic virus" FT /segment="A" FT /host="Nicotiana tabacum (tobacco)" FT /isolate="F3" FT /mol_type="genomic DNA" FT /country="China:Fujian" FT /collection_date="2006" FT /db_xref="taxon:486809" FT gene 133..501 FT /gene="AV2" FT CDS 133..501 FT /codon_start=1 FT /gene="AV2" FT /product="AV2" FT /db_xref="GOA:A1YR16" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:A1YR16" FT /protein_id="ABL73932.1" FT /translation="MWDPLVNDFPDTVHALRCMLGIKYCQLVANTYDPDTVGYDLIRDL FT ILVIRARNYVEASRRYSDFNTRLQSTPPAELRQPRDQPCRCPHCPRHKQKTGLDLQAHV FT SQAQDVQDVQKPRCSSWL" FT gene 293..1066 FT /gene="AV1" FT CDS 293..1066 FT /codon_start=1 FT /gene="AV1" FT /product="AV1" FT /db_xref="GOA:A1YR17" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:A1YR17" FT /protein_id="ABL84733.1" FT /translation="MSKRPADIVISTPASKVRRRLNFDSPGISRAAAPTVLVTNRRRAW FT TYRPMYRKPKMYRMFRSPDVPRGCEGPCKVQSFEARHDVTHTGKVICISDVTRGGGLTH FT RTGKRFCVKSVYVLGKIWMDENIKVKNHTNTVMFFVVRDRRPYGTPQDFGQVFNMYDNE FT PSTATVKNDLRDRFQVIRRFTSTVTGGQYASKEQALVKKYMKVNAQVVYNHQEAGKYEN FT HTENALLLYMACTHSSNPVYGTLKIRIYFYDSISN" FT gene complement(1063..1467) FT /gene="AC3" FT CDS complement(1063..1467) FT /codon_start=1 FT /gene="AC3" FT /product="AC3" FT /db_xref="GOA:A1YR18" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:A1YR18" FT /protein_id="ABL84734.1" FT /translation="MDSRTGEPITATQAENGVYTWMVRNPLYFKIVRHDVNVFLTRKDI FT ITVQVQFNHNLRKALGIHQCFLTCRIWTRLRPQTWRFLSVFRYQCIKYLNNLGIISINN FT VVRAIRHVLFNVLDGTIDAELSHLIKFNLY" FT gene complement(1208..1642) FT /gene="AC2" FT CDS complement(1208..1642) FT /codon_start=1 FT /gene="AC2" FT /product="AC2" FT /db_xref="GOA:A1YR19" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:A1YR19" FT /protein_id="ABL84735.1" FT /translation="MHLSKGGHYKMQNSSSSPKRSIQVPIKVQHKIAKKAIRRRRVDLP FT CGCTYYFAIECASHGFTHRGTHHCNSGREWRLYLDGQKSPVFQDRPPRRECIPDKEGHH FT HSPGPVQPQPEESIGDSPVFSDLPDLDSFTSSDLAFLKCI" FT gene complement(1515..2600) FT /gene="AC1" FT CDS complement(1515..2600) FT /codon_start=1 FT /gene="AC1" FT /product="AC1" FT /db_xref="GOA:A1YR20" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:A1YR20" FT /protein_id="ABL84736.1" FT /translation="MAPPRRFTINAKNYFLTYPQCPLSKEEALSQLLNLSTPTNKKFIK FT ICRELHEDGSPHLHILIQFEGKYKCQNNRFFDLVSPTRSAHFHPNIQGAKSSSDVKAYM FT EKDGDTAEWGEFQIDGRSARGGQQSANDAYAKAINTGSKLLALNVIKELAPKDYVLQFH FT NLNANLDKIFAPPIEVFNCPFLSSSFDQVPEEIECWVADNIKDAAARPWRPISVVIEGE FT SRTGKTMWARSLGPHNYLCGHLDLSPRVYNNDAWYNVIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPIQIKGGIPTIFLCNPGPTSSYKEYLDEERNASLKRWALQNAKFFFISEAL FT YSSTNQGPTQNSQEGYSQTES" FT gene complement(2246..2443) FT /gene="AC4" FT CDS complement(2246..2443) FT /codon_start=1 FT /gene="AC4" FT /product="AC4" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:A1YR21" FT /protein_id="ABL84737.1" FT /translation="MGALTSIFSFNSRANINARITDSSTWYPQPGQHISIRTFRELSPA FT PMSRHTWRKTATPPNGENFR" XX SQ Sequence 2739 BP; 705 A; 590 C; 638 G; 806 T; 0 other; accggatggc cgcgattttt tttgtaggcg gccccaccac gcactcctgt cccccactca 60 ggacgctccc tcacagttta tttagtgcgt ggtccccttt aaatcacttg ttcaccaagt 120 tgtaggcgca atatgtggga tcccttggta aatgattttc ctgacaccgt acacgctctg 180 cgttgtatgt taggtataaa atactgtcag ttggtagcaa atacatacga tccggatacg 240 gtgggatacg acctcatacg tgatttgata cttgtcatac gtgcacgtaa ttatgtcgaa 300 gcgtcccgcc gatatagtga tttcaacacc cgcctccaaa gtacgccgcc ggctgaactt 360 cgacagcccc gggatcagcc gtgccgctgc ccccactgtc ctcgtcacaa acagaagacg 420 ggcttggacc tacaggccca tgtatcgcaa gcccaagatg tacaggatgt tcagaagccc 480 agatgttcct cgtggctgtg aaggcccatg taaggtccag tcctttgagg cccgtcatga 540 tgtaacccat actggtaagg ttatttgtat ttcagatgtc actcgtggtg gtgggctgac 600 ccaccgaaca ggcaagaggt tctgcgtaaa gtccgtttac gtattgggta agatctggat 660 ggatgagaat attaaggtta agaaccatac aaatacagtc atgttttttg ttgtccgaga 720 caggaggcct tatggaaccc cccaggattt tgggcaggtg ttcaacatgt atgacaatga 780 gcccagtact gccactgtga agaacgatct tagagatcgt tttcaagtta tccgtcgttt 840 tacgtcaact gttactggag gtcaatatgc gagcaaggaa caagcccttg tcaagaagta 900 tatgaaggtt aacgctcagg tggtttataa ccaccaggaa gctgggaaat atgagaatca 960 tactgagaat gctttattat tgtatatggc ttgtacgcat tctagtaatc ccgtgtatgg 1020 aactttgaaa atcaggatct atttttatga ttctatcagt aattaataaa gattgaattt 1080 tattaaatgt gataactcag catcaattgt gccgtcaagt acattgaaca atacatgcct 1140 aatggctcta acaacattgt tgatgctaat aatgcctaaa ttatttaaat acttaataca 1200 ttgatatcta aatacactta agaaacgcca ggtctgagga cgtaaacgag tccagatccg 1260 gcaggtcaga aaacactggt gaatccccaa tgctttcctc aggttgtggt tgaactggac 1320 ctggactgtg atgatgtcct tccttgtcag gaatacattc acgtcgtggc ggacgatctt 1380 gaaatacagg ggatttctga ccatccaggt atagacgcca ttctctgcct gagttgcagt 1440 gatgggttcc cctgtgcgtg aatccatgcg aagcgcattc aattgcaaag taatatgtgc 1500 acccgcaagg aaggtcaact ctccgtctgc gaatagcctt cttggctatt ttgtgttgga 1560 ccttgattgg tacttgaata gagcgcttcg gagatgaaga agaattttgc attttgtaat 1620 gcccaccttt tgagagatgc attccgctcc tcgtccaagt attctttata ggacgaagtt 1680 gggcctggat tgcagaggaa gatagtggga ataccacctt taatttgaat tggtttcccg 1740 tatttggtgt tgctttgcca gtccctttgg gcccccatga actctttaaa gtgctttaag 1800 tagtgggggt cgacatcatc aatcacgttg taccaagcat cattattgta taccctcgga 1860 ctgaggtcta agtgaccaca tagataatta tgtggcccca gcgacctggc ccacattgtt 1920 ttgccagtac gactctcgcc ctcgatgaca acgctaatgg gtctccacgg ccgcgcagcg 1980 gcatctttga tgttatctgc aacccagcat tctatctcct ctgggacttg atcaaaggac 2040 gatgataaga atggacaatt aaatacctct attgggggtg caaatatttt atctaaattg 2100 gcatttaaat tatgaaactg taaaacataa tctttagggg cgagctcctt aattacatta 2160 agagccagta atttactacc ggtgttaatc gcctttgcgt aagcgtcgtt agctgattgc 2220 tgaccccctc ttgcagatct gccatctatc tgaaattctc cccattcggc ggtgtcgccg 2280 tctttctcca tgtatgcctt gacatcggag ctggacttag ctccctgaat gttcggatgg 2340 aaatgtgctg acctggttgg ggataccagg tcgaagaatc tgttattctg gcatttatat 2400 ttgccctcga attgaatgag aatatggagg tgagggctcc catcttcgtg aagctctctg 2460 caaattttaa taaatttttt atttgttggg gttgagaggt ttagtaattg ggaaagtgct 2520 tcctctttgg agagagggca ctgaggatac gtgaggaaat aattttttgc gtttattgtg 2580 aaacgcctgg gaggagccat gttgacttgg tcaatcgggg atcaaccatc tatcccattc 2640 aattggggaa tgggtctcaa tatatacttg agaccctaat ggcataaatg taattttgga 2700 aatattttga aatttcatcg cggccatccg tttaatatt 2739 //