ID EF110891; SV 1; circular; genomic DNA; STD; VRL; 2781 BP. XX AC EF110891; XX DT 02-DEC-2007 (Rel. 94, Created) DT 02-DEC-2007 (Rel. 94, Last updated, Version 1) XX DE Tomato leaf curl Sudan virus from Yemen, complete genome. XX KW . XX OS Tomato leaf curl Sudan virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2781 RA Isakeit T., Idris A., Brown J.; RT "Tomato yellow leaf curl virus in tomato (Lycopersicon esculentum) in RT Texas, originating from transplant facilities"; RL Unpublished. XX RN [2] RP 1-2781 RA Idris A., Brown J.; RT ; RL Submitted (09-NOV-2006) to the INSDC. RL Plant Sciences, University of Arizona, Tucson, AZ 85721, USA XX DR MD5; 98fef899c2470464f57542a72977f3b3. XX FH Key Location/Qualifiers FH FT source 1..2781 FT /organism="Tomato leaf curl Sudan virus" FT /chromosome="DNA-A" FT /mol_type="genomic DNA" FT /country="Yemen" FT /db_xref="taxon:270146" FT CDS 151..501 FT /codon_start=1 FT /product="V2" FT /db_xref="GOA:A9P494" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:A9P494" FT /protein_id="ABQ42709.1" FT /translation="MWDPLINEFPESVHGFRCMLAIKYLQAVEQTYEPNTLGHDLIRDL FT ISVIRARDYVEASRRYNHFHARLEGSPKAELRQPIQQPCCCPHCPRHKQASIMDVQAHV FT PKAQNIQNVSNP" FT CDS 311..1084 FT /codon_start=1 FT /product="coat protein" FT /note="V1" FT /db_xref="GOA:A9P495" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:A9P495" FT /protein_id="ABQ42710.1" FT /translation="MSKRPGDIIISTPVSKVRRRLNFDSPYSSRAAAPIVQGTNKRRSW FT TYRPMYRKPKIYRMYRTPDVPRGCEGPCKVQSFDKRHDLKHTGEVLCVSDVTRGNGLTH FT RVGKRFCIKSIYIVGKVWMDENIKVKNHTNTCMFWLVRDRRPVTTPYGFGELFNMYDNE FT PSTATIKNDLRDRCQVLKRFTASLSGGQYASKEQCVIRRFYKVYNHIVYNHQEQGKYEN FT HTENALLLYMACTHASNPVYATLKIRVYFYDSISN" FT CDS complement(1081..1485) FT /codon_start=1 FT /product="C3" FT /db_xref="GOA:A9P496" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:A9P496" FT /protein_id="ABO31312.1" FT /translation="MDSRTGEPITAHQAQSGVFIWEIKNPLYFKITDHSQRPFLMNHDI FT ISMQIRFNHNIRKELGIHKCFLNFQIWTNLQPQTGRFLRVVRYQVLKYLDNLGVISINN FT VIRAVHHVLYNVIAKTIDVTENHDIKYKIY" FT CDS complement(1226..1633) FT /codon_start=1 FT /product="C2" FT /db_xref="GOA:A9P497" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:A9P497" FT /protein_id="ABO31311.1" FT /translation="MRHSSPSPSRCSQVPIKVQHRTAKTKTVRRKRIDLNCGCSYYLHL FT NCINHGFTHRGTHHCSSSPEWRFYLGDKKSPVFQDNRPQSEAISNEPRHHFNANKIQSQ FT HQEGTGDSQMFSELPNLDELTASDWSFLKSS" FT CDS complement(1542..2621) FT /codon_start=1 FT /product="rep-associated protein" FT /note="C1" FT /db_xref="GOA:A9P498" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:A9P498" FT /protein_id="ABO31310.1" FT /translation="MAPPKRFQINCKNYFLTYPQCSLTKEEALSQLKNINTPTNKKYIK FT VCRELHENGEPHLHVLIQFEGKFKCQNQRFFDLVSPSRAAHFHPNIQGAKSSSDVKSYI FT DKDGDTLDWGEFQIDGRSARGGQQSANDAYAAAINSGSKSEALRVLRELAPRDYILQFH FT NLNSNLDRIFQEPPAPYISPFLSSSFNQVPEELEVWVSENVMPSAARPWRPNSIVIEGD FT SRTGKTMWARSLGPHNYLCGHLDLSPKVYSNNAWYNVIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPIQIKGGIPTIFLCNPGPTSSYREYLDEERNISLKNWALKNATFVTLSEPL FT FSSANQGPTPNGEDEDSQT" XX SQ Sequence 2781 BP; 740 A; 556 C; 603 G; 882 T; 0 other; accggatggc ccgcgcccct gcttttatgt ggtccccatc acgtgggttc cacacatgtc 60 gctatcatcc aatgaaattc aagcctgaaa cgttaattaa ttgtcctttt gtctttatat 120 acttggtccc caagtagttt ctcttgcaat atgtgggacc ctctgattaa cgagtttcct 180 gaatcagttc acggatttcg ttgtatgcta gccataaaat atttgcaggc cgttgagcaa 240 acatacgagc ccaatactct gggccacgat ttaattaggg atcttatttc tgttataagg 300 gcccgtgact atgtcgaagc gtcccggcga tataatcatt tccacgcccg tctcgaaggt 360 tcgccgaagg ctgaacttcg acagcccata cagcagccgt gctgctgccc ccattgtcca 420 aggcacaaac aagcgtcgat catggacgta caggcccatg taccgaaagc ccaaaatata 480 cagaatgtat cgaacccctg atgttccccg tggatgtgaa ggcccttgta aggtccaatc 540 gtttgacaag cgccatgatt tgaagcatac gggtgaggta ttgtgtgttt cagatgtaac 600 acgtggtaat ggccttactc atcgtgttgg gaaacgtttt tgtatcaagt ctatttacat 660 tgtgggcaaa gtgtggatgg atgagaacat taaggttaag aatcatacta acacttgtat 720 gttctggctt gttcgggatc gtcgtccagt taccactcca tatggatttg gggagttgtt 780 taatatgtat gataatgagc catctacagc gactattaag aatgatttgc gggatcgttg 840 tcaggttctc aagaggttta ctgctagtct gagtggtggt caatatgcct ctaaagagca 900 atgtgtgatt aggcgatttt ataaggttta taatcatatt gtgtataacc atcaagagca 960 agggaagtat gagaatcata ctgagaacgc tctattattg tatatggcat gtactcatgc 1020 ttctaatcca gtgtatgcta cacttaaaat aagggtgtat ttctatgatt caatatcaaa 1080 ttaataaatt ttatatttta tatcatgatt ttctgttaca tctattgtct ttgcaattac 1140 attatacaat acatgatgaa ctgctctaat tacattgtta atggaaatta cacccaaatt 1200 atctaaatat ttaagaacct gatacctaac tactcttaag aaacgaccag tctgaggctg 1260 taagttcgtc cagatttgga agttcagaaa acatttgtga atccccagtt ccttcctgat 1320 gttgtgattg aatcttattt gcattgaaat gatgtcgtgg ttcattagaa atggcctctg 1380 actgtggtct gttatcttga aatacagggg attttttatc tcccagataa aaacgccact 1440 ctgggcttga tgagcagtga tgggttcccc ggtgcgtgaa tccatggttg atgcagttga 1500 ggtggagata gtacgagcac ccgcaattta ggtcaatgcg cttacgtctg actgtcttcg 1560 tcttcgccgt tcggtgttgg accttgattg gcacttgaga acaacggctc ggagagggtg 1620 acgaatgtcg cattctttag agcccaattt ttcagagata tgtttctttc ttcatccaga 1680 tattctctat atgaggaggt aggtcctgga ttgcatagga agatagtggg aattccccct 1740 ttaatttgaa tgggcttccc atactttgtg ttgctttgcc agtccctctg ggcccccatg 1800 aattccttaa agtgctttaa ataatgcggg tctacgtcat caatgacgtt gtaccatgca 1860 ttattactgt aaacttttgg actcaggtcc agatgtccac acaaataatt gtgtggtcct 1920 agagacctgg cccacattgt tttgccggtt ctactatcac cctcgatgac aatactatta 1980 ggtctccatg gccgcgcagc ggaaggcatg acgttctccg acacccaaac ctcaagttcc 2040 tctggaactt gattaaaaga agaagataga aaaggagaaa tatacggagc cggaggctcc 2100 tgaaaaatcc tatctaaatt actatttaaa ttatgaaatt gtaaaatata atctctggga 2160 gctaattccc taagtactct aagagcctct gacttactgc ctgagttaat tgctgcggcg 2220 taagcatcgt ttgcagattg ttgaccccct cttgcagacc ttccatcgat ctgaaactct 2280 ccccagtcga gagtgtctcc gtccttatcg atgtaggact tgacgtcgga acttgattta 2340 gctccctgaa tgtttggatg gaaatgtgct gccctgcttg gggataccag gtcgaagaat 2400 cgctgatttt ggcacttgaa tttgccttcg aactgtataa gcacatggag atgtggctcc 2460 ccattctcgt gaagttctct gcaaactttg atatattttt tatttgttgg ggtatttatg 2520 ttttttaatt gggaaagtgc ctcttctttt gttaaggagc attgaggata tgtaaggaaa 2580 taatttttgc aatttatttg aaaacgcttg ggaggagcca tatggtcaat gagtaccgat 2640 tgaccaagat ttcatttatc ccttgtatat cggtactcaa tatatagtga gtaccaaatg 2700 gcatattggt aattatgtaa aggtacattt attttcaaaa tttaaaattg aaattcataa 2760 agcggccatc cgtataatat t 2781 //