ID EF107520; SV 1; circular; genomic DNA; STD; VRL; 2784 BP. XX AC EF107520; XX DT 12-DEC-2006 (Rel. 90, Created) DT 12-DEC-2006 (Rel. 90, Last updated, Version 1) XX DE Tomato yellow leaf curl virus isolate TYLCV-Nob, complete genome. XX KW . XX OS Tomato yellow leaf curl virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2784 RA Abdallah N.A., Fauquet C.M., Beachy R.N., Madkour M.A.; RT "Cloning and constructing infectious clones of an Egyptian isolate of RT tomato yellow leaf curl virus"; RL Arab J. Biotechnol. 3(1):35-54(2000). XX RN [2] RP 1-2784 RA Abdallah N.A., Fauquet C.M., Beachy R.N., Madkour M.A.; RT ; RL Submitted (07-NOV-2006) to the INSDC. RL Genetics, Cairo University, 13 Gamaa St., Giza, Cairo 12613, Egypt XX DR MD5; 390b33ba4970457a425122dc2d41f479. XX FH Key Location/Qualifiers FH FT source 1..2784 FT /organism="Tomato yellow leaf curl virus" FT /isolate="TYLCV-Nob" FT /mol_type="genomic DNA" FT /country="Egypt:Nobaria" FT /db_xref="taxon:10832" FT gene 317..667 FT /gene="v2" FT CDS 317..667 FT /codon_start=1 FT /gene="v2" FT /product="pre-coat protein" FT /db_xref="GOA:A1E4B8" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:A1E4B8" FT /protein_id="ABL60922.1" FT /translation="MWDPLLNEFPESVHGFRCMLAIKYLQSVEETYDANTLGHDLIRDL FT ISVVRARDYVEATRRYNHFHARLEGSPKAELRQPIQQPCCCPHCPRHKQATIMDVQAHV FT SKAQNIQNVSKP" FT gene 477..1253 FT /gene="cp" FT CDS 477..1253 FT /codon_start=1 FT /gene="cp" FT /product="coat protein" FT /db_xref="GOA:A1E4B9" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:A1E4B9" FT /protein_id="ABL60923.1" FT /translation="MSKRPGDIIISTPVSKVRRRLNFDSPYSSRAAVPTVQGTNKRRSW FT TYRPMYRKPRIYRMYRSPDVPRGCEGPCKVQSYEQRDDIKHTGIVRCVSDVTRGSGITH FT RVGKRFCVKSIYFLGKVWMDENIKKQNHTNQVMFFLVRDRRPYGSSPMDFGQVFNMFDN FT EPSTATVKNDLRDRFQVMRKFHATVIGGPSGMKEQVLVKRFFKINSHVTYNHQEAAKYE FT NHTENALLLYMACTHASNPVYATMKIRIYFYDSISN" FT gene complement(1250..1654) FT /gene="c3" FT CDS complement(1250..1654) FT /codon_start=1 FT /gene="c3" FT /product="C3" FT /db_xref="GOA:A1E4C0" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:A1E4C0" FT /protein_id="ABL60926.1" FT /translation="MDSRTGELITAPQAENGVFIWEINNPLYFKITEHSQRPFLMNHDI FT ISIQIRFNHNIRKVMGIHKCFLNFRIWTTLQPQTGRFLRVFRYEVLKYLDSLGVISINN FT VIRAVDHVLYDVLVNTINVTETHDIKYKFY" FT gene complement(1395..1802) FT /gene="c2" FT CDS complement(1395..1802) FT /codon_start=1 FT /gene="c2" FT /product="C2" FT /db_xref="GOA:Q6PMS4" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:Q6PMS4" FT /protein_id="ABL60925.1" FT /translation="MQPSSPSTSHCSQVSIKVQHKIAKKKPIRRKRVDLDCGCSYYLHL FT NCNNHGFTHRGTHHCSSGREWRFYLGDKQSPLFQDNRTQSEAISNEPRHHFHSDKIQPQ FT HQEGNGDSQMFSQLPNLDDITASDWSFLKSI" FT gene complement(1711..2784) FT /gene="rep" FT CDS complement(1711..2784) FT /codon_start=1 FT /gene="rep" FT /product="Rep" FT /db_xref="GOA:Q00GD8" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:Q00GD8" FT /protein_id="ABL60924.1" FT /translation="MPRLFKIYAKNYFLTYPNCSLSKEEALSQLKNLETPTNKKYIKVC FT RELHENGEPHLHVLIQFEGKYQCKNQRFFDLVSPNRSAHFHPNIQAAKSSTDVKTYVEK FT DGDFIDFGVFQIDGRSARGGQQSANDAYAEALNSGSKSEALNILKEKAPKDYILQFHNL FT SSNLDRIFSPPLEVYVSPFLSSSFNQVPDELEEWVAENVVSSAARPWRPISIVIEGDSR FT TGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDWQS FT NTKYGKPIQIKGGIPTIFLCNPGPTSSYREYLDEEKNISLKNWALKNATFVTLYEPLFA FT SINQGPTQDSQEETNKA" FT gene complement(2340..2633) FT /gene="c4" FT CDS complement(2340..2633) FT /codon_start=1 FT /gene="c4" FT /product="C4" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:A1E4C3" FT /protein_id="ABL60927.1" FT /translation="MGNHISMCLSNSKANTNVRTNGSSTWYPQTGQHISIQTFRQLRAQ FT QMSRPTWRKTETSLILEFSKSMADQLEEVSNLPTTHMPKHSIQAVNPRPSIY" XX SQ Sequence 2784 BP; 756 A; 538 C; 608 G; 882 T; 0 other; gttgaaatga atcggtgtcc ctcaaagctc tatggcaact cggtgtatcg gtgtcttact 60 tataccttgg acacctaatg gctatttggt aatttcataa atgttcattg caattcaaaa 120 ttcaaaattc aaaaatcaaa tcattaaagc ggccatccgt ataatatttc cggatggccg 180 cgccttttcc ttttatgtgg tccccagtga aaattccaca gacgtcactg tcaaccaatc 240 aaattgcatc ctcaaacgtt agataagtgt tcatttgtct ttatatactt ggtccccaag 300 tattttgtct tgcaatatgt gggacccact tctaaatgaa tttcctgaat ctgttcacgg 360 atttcgttgt atgttagcta ttaaatattt gcagtccgtt gaggaaactt acgacgccaa 420 tacattgggc cacgatttaa ttagggatct tatatctgtt gtaagggccc gtgactatgt 480 cgaagcgacc aggcgatata atcatttcca cgcccgtctc gaaggttcgc cgaaggctga 540 acttcgacag cccatacagc agccgtgctg ctgtccccac tgtccaaggc acaaacaagc 600 gacgatcatg gacgtacagg cccatgtatc gaaagcccag aatatacaga atgtatcgaa 660 gccctgatgt tccccgtgga tgtgaaggcc catgtaaagt ccagtcttat gagcaacggg 720 atgatattaa gcatactggt attgttcgtt gtgttagtga tgttactcgt ggatctggaa 780 ttactcacag agtgggtaag aggttctgtg ttaaatcgat atatttttta ggtaaagtct 840 ggatggatga aaatatcaag aagcagaatc acactaatca ggtcatgttc ttcttggtcc 900 gtgatagaag gccctatgga agcagcccaa tggattttgg gcaggttttt aatatgttcg 960 ataatgagcc cagtaccgca accgtgaaga acgatttgcg ggataggttt caagtgatga 1020 ggaaatttca tgctacagtt attggtgggc cctctggaat gaaggaacag gtcttagtta 1080 agagattttt taaaattaac agtcatgtaa cttataatca tcaggaggca gccaagtacg 1140 agaaccatac tgaaaacgcc ttgttattgt atatggcatg tacgcatgcc tctaatccag 1200 tgtatgcaac tatgaaaata cgcatctatt tttatgattc aatatcaaat taataaaatt 1260 tatattttat atcatgagtt tctgttacat ttattgtgtt tacaagtaca tcgtacaata 1320 catgatcaac tgctctgatt acattgttaa tggaaattac accaagacta tctaaatatt 1380 taagaacttc atatctaaat actcttaaga aacgaccagt ctgaggctgt aatgtcgtcc 1440 aaattcggaa gttgagaaaa catttgtgaa tccccattac cttcctgatg ttgtggttga 1500 atcttatctg aatggaaatg atgtcgtggt tcattagaaa tggcctctga ctgtgttctg 1560 ttatcttgaa atagagggga ttgtttatct cccagataaa aacgccattc tctgcctgag 1620 gagcagtgat gagttcccct gtgcgtgaat ccatgattgt tgcagttgag gtggaggtag 1680 tatgagcagc cacagtctag gtctacacgc ttacgcctta ttggtttctt cttggctatc 1740 ttgtgttgga ccttgattga tacttgcgaa cagtggctcg tagagggtga cgaaggttgc 1800 attcttgaga gcccaatttt tcaaggatat gtttttttct tcgtctagat attccctata 1860 tgaggaggta ggtcctggat tgcagaggaa gatagtggga attccccctt taatttgaat 1920 gggcttcccg tattttgtgt tgctttgcca gtccctctgg gcccccatga attccttgaa 1980 gtgctttaaa taatgcgggt ctacgtcatc aatgacgttg taccacgcat cattactgta 2040 cacctttggg cttaggtcta gatgtccaca taaataatta tgtgggccta gagacctggc 2100 ccacattgtt ttgcctgttc tactatcacc ctcaatgaca atgcttatgg gtctccatgg 2160 ccgcgcagcg gaagacacga cgttctcggc gacccactct tcaagttcat ctggaacttg 2220 attaaaagaa gaagaaagaa atggagaaac ataaacttct aaaggaggac taaaaatcct 2280 atctaaattt gaacttaaat tatgaaattg taaaatatag tcctttgggg ccttctcttt 2340 taatatattg agggcctcgg atttactgcc tgaattgagt gcttcggcat atgcgtcgtt 2400 ggcagattgc tgacctcctc tagctgatct gccatcgatt tggaaaactc caaaatcaat 2460 gaagtctccg tctttctcca cgtaggtctt gacatctgtt gagctcttag ctgcctgaat 2520 gtttggatgg aaatgtgctg acctgtttgg ggataccagg tcgaagaacc gttggttctt 2580 acattggtat ttgccttcga attggataag cacatggaga tgtggttccc cattctcgtg 2640 gagttctctg caaactttga tgtatttttt atttgttggg gtttctaggt tttttaattg 2700 ggaaagtgct tcctctttag agagagaaca attgggatat gttaggaaat aattcttggc 2760 atatatttta aataaacgag gcat 2784 //