ID EF101929; SV 1; circular; genomic DNA; STD; VRL; 2781 BP. XX AC EF101929; XX DT 04-DEC-2006 (Rel. 90, Created) DT 08-JAN-2008 (Rel. 94, Last updated, Version 2) XX DE Tomato yellow leaf curl virus - [Tunisia], complete sequence. XX KW . XX OS Tomato yellow leaf curl virus - [Tunisia] OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2781 RX DOI; 10.1111/j.1439-0434.2007.01224.x. RX AGRICOLA; IND43899955. RA Gharsallah Chouchane S., Gorsane F., Nakhla M.K., Maxwell D.P., RA Marrakchi M., Fakhfakh H.; RT "First Report of Tomato Yellow Leaf Curl Virus-Israel Species Infecting RT Tomato, Pepper and Bean in Tunisia"; RL J. Phytopathol. 155(4):236-240(2007). XX RN [2] RP 1-2781 RA Gharsallah Chouchane S., Gorsane F., Nakhla M.K., Maxwell D.P., RA Marrakchi M., Fakhfakh H.; RT ; RL Submitted (26-OCT-2006) to the INSDC. RL Biology, Faculty of Sciences of Tunis, Tunis 2092, Tunisia XX DR MD5; d7386dee907a72c532311ca0bbb6998f. DR EuropePMC; PMC2224568; 17977971. XX FH Key Location/Qualifiers FH FT source 1..2781 FT /organism="Tomato yellow leaf curl virus - [Tunisia]" FT /mol_type="genomic DNA" FT /country="Tunisia:Sahel region" FT /db_xref="taxon:413710" FT gene 148..498 FT /gene="V1" FT CDS 148..498 FT /codon_start=1 FT /gene="V1" FT /product="pre-coat protein" FT /db_xref="GOA:A1E2T1" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:A1E2T1" FT /protein_id="ABK96895.1" FT /translation="MWDPLLNEFPESVHGFRCMLAIKYLQSVEETYEPNTLGHDLIRDL FT ISVVRARDYVEATRRYNHFHARLEGSPKAELRQPIQQPCCCPHCPRHKQATIMDVQAHV FT PKAQNIQNVSKP" FT gene 308..1084 FT /gene="CP" FT CDS 308..1084 FT /codon_start=1 FT /gene="CP" FT /product="coat protein" FT /db_xref="GOA:A1E2T2" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:A1E2T2" FT /protein_id="ABK96896.1" FT /translation="MSKRPGDIIISTPVSKVRRRLNFDSPYSSRAAVPIVQGTNKRRSW FT TYRPMYRKPRIYRMYRSPDVPRGCEGPCKVQSYEQRDDIKHTGIVRCVSDVTRGSGITH FT RVGKRFCVKSIYFLGKVWMDENIKKQNHTNQVMFFLVRDRRPYGNSPMDFGQVFNMFDN FT EPSTATVKNDLRDRFQVMRKFHATVIGGPSGMKEQALVKRFFKINSHVTYNHQEAAKYE FT NHTENALLLYMACTHASNPVYATMKIRIYFYDSISN" FT gene complement(1081..1485) FT /gene="C3" FT CDS complement(1081..1485) FT /codon_start=1 FT /gene="C3" FT /product="C3 protein" FT /db_xref="GOA:A1E2T3" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:A1E2T3" FT /protein_id="ABK96897.1" FT /translation="MDSRTGELITAPQAENGVFIWEINNPLYFKITEHSQRPFLMNHDI FT ISIQIRFNHNIRKVLGIHKCFLNFRIWTTLQPQTGRFLRVFRYEVLKYLDSLGVISINN FT VIRAVDHVLYDVLENTINVTEAHDIKYKCY" FT gene complement(1226..1633) FT /gene="C2" FT CDS complement(1226..1633) FT /codon_start=1 FT /gene="C2" FT /product="C2 protein" FT /db_xref="GOA:A1E2T4" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:A1E2T4" FT /protein_id="ABK96898.1" FT /translation="MQPSSPSTSHCSQVSIKVQHKIAKKKPIRRKRVDLDCGCSYYLHL FT NCNNHGFTHRGTHHCSSGREWRFYLGDKQSPLFQDNRTQPAAISNEPRHHFHSDKIQPQ FT HQEGIGDSQMFSQLPNLDDITASDWSFLKSI" FT gene complement(1542..2615) FT /gene="Rep" FT CDS complement(1542..2615) FT /codon_start=1 FT /gene="Rep" FT /product="replication associated protein" FT /db_xref="GOA:A1E2T5" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:A1E2T5" FT /protein_id="ABK96899.1" FT /translation="MPRLFKIYAKNYFLTYPNCYLSKEEALSQLKNLETPTNKKYIKVC FT REFHENGEPHLHVLIQFEGKYQCKNQRFFDLVSPNRSAHFHPNIQAAKSSTDVKTYVEK FT DGEFIDFGVFQIDGRSARGGQQSANDAYAEALNSGSKSEALNILKEKAPKDYILQFHNL FT SSNLDRIFSPPLEVYVSPFLSSSFNQVPDELEEWVAENVVSSAARPWRPISIVIEGDSR FT TGKTMWARSLGPHNYLCGHLDLSPKVYNNDVWYNVIDDVDPHYLKHFKEFMGAQRDWQS FT NTKYGKPIQIKGGIPTIFLCNPGPTSSYREYLDEEKNISLKNWSLKNATFVTLYEPLFA FT SINQGPTQDSQEETNKA" FT gene complement(2171..2464) FT /gene="C4" FT CDS complement(2171..2464) FT /codon_start=1 FT /gene="C4" FT /product="C4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:A1E2T6" FT /protein_id="ABK96900.1" FT /translation="MGNHISMCLSNSKANTNVKTNGSSTWYPQTGQHISIRTFRQLRAQ FT QMSRPTWRKTENSLILEFSKSMADQLEEVSNLPTTHMPKHSIQAVNPRPSIY" XX SQ Sequence 2781 BP; 756 A; 541 C; 606 G; 878 T; 0 other; accggatggc cgcgcctttt ccttttatgt ggtccccacg agggttacac agacgtcact 60 gtcaaccaat caaattgcat cctcaaacgt tagataagtg ttcatttgtc tttatatact 120 tggtccccaa gtattttgtc ttgcaatatg tgggaccctc ttctaaatga atttcctgaa 180 tctgttcacg gatttcgttg tatgttagct attaaatatt tgcagtccgt tgaggaaact 240 tacgagccca atacattggg ccacgattta attagggatc ttatatctgt tgtaagggcc 300 cgtgactatg tcgaagcgac ccggcgatat aatcatttcc acgcccgtct cgaaggttcg 360 ccgaaggctg aacttcgaca gcccatacag cagccgtgct gctgtcccca ttgtccaagg 420 cacaaacaag cgacgatcat ggacgtacag gcccatgtac cgaaagccca gaatatacag 480 aatgtatcga agccctgatg ttccccgtgg atgtgaaggc ccatgtaaag tgcagtctta 540 tgagcaacgg gatgatatta agcataccgg tattgttcgt tgtgtcagtg atgttactcg 600 tggatctgga attactcaca gagtgggtaa gaggttctgt gttaaatcga tatatttttt 660 aggtaaagtc tggatggatg aaaacatcaa gaagcagaat cacactaatc aggtcatgtt 720 cttcttggtc cgtgatagga ggccctatgg aaacagccca atggattttg gacaggtttt 780 taatatgttc gataatgagc ccagtaccgc aaccgtgaag aatgatttgc gtgataggtt 840 tcaagtgatg aggaaatttc atgctacagt tattggtggg ccctctggaa tgaaggaaca 900 ggcattagtt aagagatttt ttaaaattaa cagtcatgta acttataatc atcaggaggc 960 agccaagtat gagaaccata ctgaaaacgc cttgttattg tatatggcat gtacgcatgc 1020 ctctaatcct gtgtatgcaa ctatgaaaat acgcatctat ttctatgatt caatatcaaa 1080 ttaataacat ttatatttta tatcatgagc ttctgttaca tttattgtgt tttcaagtac 1140 atcatacaat acatgatcaa ctgctctgat tacattgtta atggaaatta caccaagact 1200 atctaaatac ttaagaactt catatctaaa tactcttaag aaacgaccag tctgaggctg 1260 taatgtcgtc caaattcgga agttgagaaa acatttgtga atccccaata ccttcctgat 1320 gttgtggttg aatcttatct gaatggaaat gatgtcgtgg ttcattagaa atggccgctg 1380 gctgtgttct gttatcttga aatagagggg attgtttatc tcccagataa aaacgccatt 1440 ctctgcctga ggagcagtga tgagttcccc tgtgcgtgaa tccatgattg ttgcagttga 1500 ggtggaggta gtatgagcag ccacagtcta ggtctacacg cttacgcctt attggtttct 1560 tcttggctat cttgtgttgg accttgattg atacttgcga acagtggctc gtagagggtg 1620 acgaaggttg cattcttgag agaccaattt ttcaaggata tgtttttttc ttcatctaga 1680 tattccctat atgaggaggt aggtcctgga ttgcagagga agatagtggg aattccccct 1740 ttaatttgaa tgggcttccc gtactttgtg ttgctttgcc agtccctctg ggcccccatg 1800 aattccttga agtgctttaa ataatgcggg tctacgtcat caatgacgtt gtaccacaca 1860 tcgttattgt acacctttgg gcttaggtct agatgtccac ataaataatt atgtgggcct 1920 agagacctgg cccacattgt cttgcccgtt ctgctatcac cctcaatgac aatacttatg 1980 ggtctccatg gccgcgcagc ggaagatacg acgttctcgg cgacccactc ttcaagttca 2040 tctggaactt gattaaaaga agaagaaaga aatggagaaa cataaacttc taaaggagga 2100 ctaaaaatcc tatctaaatt tgaacttaaa ttatgaaatt gtaaaatata gtcctttggg 2160 gccttctctt ttaatatatt gagggcctcg gatttactgc ctgaattgag tgcttcggca 2220 tatgcgtcgt tggcagattg ctgacctcct ctagctgatc tgccatcgat ttggaaaact 2280 ccaaaatcaa tgaattctcc gtctttctcc acgtaggtct tgacatctgt tgagctctta 2340 gctgcctgaa tgttcggatg gaaatgtgct gacctgtttg gggataccag gtcgaagaac 2400 cgttggtttt tacattggta tttgccttcg aattggataa gcacatggag atgtggttcc 2460 ccattctcgt ggaattctct gcaaactttg atgtattttt tatttgttgg ggtttctagg 2520 ttttttaatt gggaaagtgc ttcctcttta gagagataac aattgggata tgtcaggaaa 2580 taatttttgg catatatttt aaataaacga ggcatgttga aatgaatcgg tgtccctcaa 2640 agctctatgg caatcggtgt attggtgtct tacttatacc tggacaccta atggctatat 2700 ggtaatttca taaatgttta ttgcaattca aaattcaaac ttcaaaaatc aaatcattaa 2760 agcggccatc cgtataatat t 2781 //