ID   EF088798; SV 1; linear; genomic RNA; STD; VRL; 852 BP.
XX
AC   EF088798;
XX
DT   01-JAN-2008 (Rel. 94, Created)
DT   08-MAY-2008 (Rel. 95, Last updated, Version 2)
XX
DE   Sugarcane streak mosaic virus isolate CB86-2 coat protein gene, partial
DE   cds.
XX
KW   .
XX
OS   Sugarcane streak mosaic virus
OC   Viruses; Riboviria; Potyviridae; Poacevirus.
XX
RN   [1]
RP   1-852
RX   DOI; 10.1007/s11262-008-0228-y.
RX   PUBMED; 18427969.
RA   Viswanathan R., Balamuralikrishnan M., Karuppaiah R.;
RT   "Characterization and genetic diversity of sugarcane streak mosaic virus
RT   causing mosaic in sugarcane";
RL   Virus Genes 36(3):553-564(2008).
XX
RN   [2]
RP   1-852
RA   Viswanathan R., Balamuralikrishnan M., Karuppaiah R.;
RT   ;
RL   Submitted (26-OCT-2006) to the INSDC.
RL   Plant Pathology, Sugarcane Breeding Institute, Coimbatore, Tamil Nadu
RL   641007, India
XX
DR   MD5; b4d7701a9163cc648d2cd8743fed79d1.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..852
FT                   /organism="Sugarcane streak mosaic virus"
FT                   /host="Saccharum spp. hybrid cultivar CoJ 86"
FT                   /isolate="CB86-2"
FT                   /mol_type="genomic RNA"
FT                   /country="India"
FT                   /db_xref="taxon:53954"
FT   CDS             <1..852
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /db_xref="GOA:A9XAM8"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:A9XAM8"
FT                   /protein_id="ABO16347.1"
FT                   /translation="GQGTQPPQNQSSSPATTSSTSSTTTSRVDSQTTGNLTNTVSQTMK
FT                   SLYVPPLVKSLKTEAKAKQMMRYTPPQALISSSAASIRQFNDWANTAAEGYGKTIQQFT
FT                   DEILPFWIYWCVVNGATEENKTKPKWTKAVLNLDGADGTEITVDENGPQVEFEMGPMYR
FT                   NAKPGIRAIMRHFGELAYKWVQFSVRSGKPIIPHNAVKAGLTTPEFYPCCIDFVMVNIL
FT                   SPAEIDVRNQVINARTPRMGKPLFRHALRAGGDEDTDLRREDDANYGRTQIGGAQFGRA
FT                   QH"
XX
SQ   Sequence 852 BP; 269 A; 189 C; 213 G; 181 T; 0 other;
     ggacaaggaa cgcagccacc tcagaatcag agtagttcac cagcgacaac atcaagcaca        60
     tcatcaacaa caacgagtcg agttgacagc cagacaacag ggaatttgac taatacagtc       120
     tctcagacca tgaaatccct gtacgttccg ccattggtga aatcgctcaa aacagaagcc       180
     aaggcaaagc agatgatgag gtacacacca ccacaagctc ttatctcttc atcagccgcc       240
     tcaatacgac agttcaatga ttgggcgaat acagcagccg aaggatatgg gaaaactatt       300
     caacaattca cagatgaaat acttccattc tggatttact ggtgtgttgt taatggagcg       360
     acagaagaga acaaaaccaa gcccaagtgg acaaaagctg tgttaaatct ggatggagct       420
     gatgggacag agataactgt tgatgaaaat gggcctcaag tggagttcga aatggggcca       480
     atgtatagaa acgccaaacc tggaattcgc gctatcatga gacactttgg cgaattggcg       540
     tacaagtggg ttcagttctc ggttcgtagc gggaaaccca taataccaca taatgcagta       600
     aaggcaggat taacaactcc agagttttat ccttgctgca ttgattttgt gatggtgaat       660
     atcctctcac cagcagaaat agacgtgcgt aaccaggtga ttaatgcacg cacaccccgg       720
     atgggaaagc ctttattccg tcacgcgctt agagccgggg gagatgagga cacggacctg       780
     cgtagagaag atgatgctaa ttatggaagg acgcagatcg gaggcgctca gtttgggcgt       840
     gctcagcact ga                                                           852
//