ID EF068246; SV 1; circular; genomic DNA; STD; VRL; 2740 BP. XX AC EF068246; XX DT 18-JUN-2007 (Rel. 92, Created) DT 18-JUN-2007 (Rel. 92, Last updated, Version 1) XX DE Tomato leaf curl New Delhi virus segment DNA-A, complete sequence. XX KW . XX OS Tomato leaf curl New Delhi virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2740 RA Malathi V.G., Priya J.; RT "Nucleotide sequence of DNA A of Tomato leaf curl New Delhi virus from RT Tomato"; RL Unpublished. XX RN [2] RP 1-2740 RA Malathi V.G., Priya J.; RT ; RL Submitted (17-OCT-2006) to the INSDC. RL Division of Plant Pathology, Indian Agricultural Research Institute, Pusa RL Road, New Delhi, Delhi 110012, India XX DR MD5; f4a975bdebea4310b3c24b1bcdc3ddc1. XX FH Key Location/Qualifiers FH FT source 1..2740 FT /organism="Tomato leaf curl New Delhi virus" FT /segment="DNA-A" FT /host="tomato" FT /mol_type="genomic DNA" FT /db_xref="taxon:223347" FT gene 120..458 FT /gene="AV2" FT CDS 120..458 FT /codon_start=1 FT /gene="AV2" FT /product="pre-coat protein" FT /db_xref="GOA:A6MHR1" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:A6MHR1" FT /protein_id="ABO31249.1" FT /translation="MWDPLLHEFPESVHGLRCMLAVKYLQEIEKNYSPDTVGYDLVRDL FT ILVLRAKNYGEATSRYHHFNARIEGTPTSQLRQPLWSSCSCPHCPRHKSKGLDKQADEQ FT KTQNVQNV" FT gene 280..1053 FT /gene="AV1" FT CDS 280..1050 FT /codon_start=1 FT /gene="AV1" FT /product="coat protein" FT /db_xref="GOA:A6MHR2" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:A6MHR2" FT /protein_id="ABO31248.1" FT /translation="MAKRPADIIISTPASKVRRRLNFDSPYGARAVVPIARVTKAKAWT FT NRPMNRKPRMYRMYRSPDVPRGCEGPCKVQSFESRHDVSHIGKVMCVSDVTRGTGLTHR FT VGKRFCVKSVYVLGKIWMDENTKTKNHTNSVMFFLVRDRRPTGSPQDFGEVFNMFDNEP FT STATVKNMHRDRYQVLRKWHATVTGGTYASKEQALVRKLVRVNNYVVYNQQEAGKYENH FT TENALMLYMACTHASNPVYATLKIRIYFYDSVTN" FT gene complement(310..795) FT /gene="AC5" FT CDS complement(310..795) FT /codon_start=1 FT /gene="AC5" FT /product="AC5 protein" FT /db_xref="InterPro:IPR006892" FT /db_xref="InterPro:IPR013671" FT /db_xref="UniProtKB/TrEMBL:A6MHR3" FT /protein_id="ABO31254.1" FT /translation="MHVLHRCCARFIVKHVKNFPKILGGSRRTTVTDQKKHNTVSMVFR FT LGVFIHPYLPQHIHRFHTKSLSYAMCESSSSSNITNAHDLANMRDIVPGFKGLHLARAF FT TSPWHVGTSIHSVHSGFSVHRPVCPGLCFCDAGNGDNCTSSIGAVEVETSAYLRCGR" FT gene complement(1047..1457) FT /gene="AC3" FT CDS complement(1047..1457) FT /codon_start=1 FT /gene="AC3" FT /product="transcription enhancer protein" FT /db_xref="GOA:A6MHR4" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:A6MHR4" FT /protein_id="ABO31252.1" FT /translation="MITDSRTGEYITADRAESGVYTWEIRNPLYFKILKHDSRPFLTQH FT DIIKVQIQFNHNLRKALGLHKCFLTFQIWTGLRPQIGIFLRVFKTQVLKYLDMLGVIGI FT YNVIRAVYHVLDNVLEQTIDVWTSYDIKLDIY" FT gene complement(1177..1596) FT /gene="AC2" FT CDS complement(1177..1596) FT /codon_start=1 FT /gene="AC2" FT /product="transcription activator protein" FT /db_xref="GOA:A6MHR5" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:A6MHR5" FT /protein_id="ABO31251.1" FT /translation="MQSSSHSKNHSIPVAKTSLPQKKKKSIRRRRVDLPCGCSYYVSIN FT CHDHGFTHRGIHHCGSSREWRIYLGNSKSPLFQNFETRQQALPNTARHNQSSNTIQPQP FT AESTGASQVFSNFPNLDGLTPSDWDFLESLQNPGP" FT gene complement(1499..2584) FT /gene="AC1" FT CDS complement(1499..2584) FT /codon_start=1 FT /gene="AC1" FT /product="replication initiation protein" FT /db_xref="GOA:A6MHR6" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:A6MHR6" FT /protein_id="ABO31250.1" FT /translation="MAPPSRFRINAKNYFLTYPKCSLTKEEALSQLQTLETPTSKKFIK FT ICRELHEDGTPHIHVLIQFEGKFQCKNNRFFDLVSPSRSAHFHPNIQGAKSASDVKAYI FT DKDGDVLEWGVFQIDGRSARGGQQTANDAYAQAINTGNKEDAMKLLKELAPKDYVLQFH FT NLITNLDRIFQTRSEVYVSPFSISSFDRVPPELVDWVTSNVVCAAARPFRPISVVIEGD FT SRTGKTMWARCLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPVMIKGGIPTIFLCNKGPNSSYKEYLDEEKNAALKQWAIKNAVFITLKEPL FT YSGRENIAPAEEEEEHSQEAS" FT gene complement(2251..2427) FT /gene="AC4" FT CDS complement(2251..2427) FT /codon_start=1 FT /gene="AC4" FT /product="AC4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:A6MHR7" FT /protein_id="ABO31253.1" FT /translation="MGLRISMFLSNSKENSNAKITDSSTWCPQVGQHISIRTFRELNQH FT RTSKHTSTKMETF" XX SQ Sequence 2740 BP; 749 A; 587 C; 612 G; 792 T; 0 other; accgaatggc cgcgcaaatt tttatgtggg accgcgacga atgaaattca agctacatgg 60 cttctttaat gcgtagggac ctttaaatag acttgctcac caagtttgga tccacaaaca 120 tgtgggatcc attattgcac gaatttccag aaagcgttca tggtctaagg tgcatgctag 180 ctgtaaaata tctccaagag attgaaaaga actactcccc agacacagtc ggatacgatc 240 ttgtccgaga tctcatcctt gttctccgag caaagaacta tggcgaagcg accagcagat 300 atcatcattt caacgcccgc atcgaaggta cgccgacgtc tcaacttcga cagcccctat 360 ggagctcgtg cagttgtccc cattgcccgc gtcacaaaag caaaggcctg gacaaacagg 420 ccgatgaaca gaaaacccag aatgtacaga atgtatagaa gtcccgacgt gccaagggga 480 tgtgaaggcc cttgcaaggt gcagtccttt gaatccaggc acgatgtctc tcatattggc 540 aaggtcatgt gcgttagtga tgttactcga ggaactggac tcacacatcg cgtaggaaag 600 cgattttgtg tgaaatctgt gtatgtgctg gggaagatat ggatggatga aaacaccaag 660 acgaaaaacc atactaacag tgttatgttt tttttggtcc gtgaccgtcg tccgacggga 720 tccccccaag attttgggga agtttttaac atgtttgaca atgaaccgag cacagcaacg 780 gtgaagaaca tgcatcgtga tcgttatcaa gtgttacgga agtggcatgc gactgtgacg 840 ggaggaactt atgcatcgaa ggagcaagca ttagttagga agcttgttag ggttaataat 900 tatgttgttt ataatcaaca agaggccggc aagtatgaga atcatactga aaatgcgtta 960 atgttgtata tggcctgtac tcacgcatca aatcctgtat atgctacttt gaaaatccgg 1020 atctatttct atgattcggt cacaaattaa taaatatcga gttttatatc atatgaagtc 1080 catacatcaa tcgtctgttc caatacatta tccaatacat gataaactgc tcgtattaca 1140 ttataaattc ctatgacacc taacatatcc aggtacttaa ggacctgggt tttgaagact 1200 ctcaagaaaa tcccaatctg agggcgtaag cccgtccaga tttggaaagt tagaaaacac 1260 ttgtgaagcc ccagtgcttt ccgcaggttg tggttgaatt gtatttgaac tttgattatg 1320 tcgtgctgtg ttaggaaggg cctgctgtcg tgtttcaaaa ttttgaaata gaggggattt 1380 cgaatttccc aggtatatac gccactctct gctcgatccg cagtgatgta ttcccctgtg 1440 cgtgaatccg tgatcatggc agtttatcga cacgtaatac gaacaaccac acggaagatc 1500 aactcgcctc ctgcgaatgc tcttcttctt cttctgcggg agcgatgttt tcgcgaccgg 1560 aatagagtgg ttctttgagt gtgatgaaga ctgcattctt gattgcccac tgcttcaatg 1620 ctgcattctt ctcttcgtcc aaatattcct tatagctgct gtttggacct ttattgcaga 1680 ggaagatagt gggaattcca cctttaatca tgaccggctt tccgtacttc gtgttgcttt 1740 gccagtcacg ctgggccccc atgaattctt taaagtgctt tagatagtgg ggatcaacgt 1800 catcaatgac gttgtaccaa gcatcattgc tatacacctt tgggctgaga tctagatgtc 1860 cacacaagta attgtgtggt cctaagcaac gagcccacat tgttttgccc gtcctactat 1920 ccccctctat gactacactt attggcctaa aaggccgcgc agcggcacac acaacattcg 1980 acgtgaccca atcgacgagt tctggcggaa ctctgtcgaa ggaagaaatt gaaaatggag 2040 agacataaac ctcagaacgt gtttgaaaaa tgcgatctaa atttgtaatc aaattgtgaa 2100 actgcagaac ataatccttt ggtgcaagtt ctttcaataa tttcatggca tcttctttat 2160 ttcctgtgtt tatcgcctga gcatatgcat cgtttgctgt ttgctgacca ccacgagcag 2220 atcgtccatc gatctggaaa acaccccatt ctagaacgtc tccatctttg tcgatgtatg 2280 ctttgacgtc cgatgctgat ttagctccct gaatgttcgg atggaaatgt gctgaccgac 2340 ttggggacac caagtcgaag aatctgttat ttttgcattg gaattttcct tcgaattgga 2400 taagaacatg gatatgcgga gtcccatctt cgtgaagctc tcgacagatc ttgatgaatt 2460 tcttcgaagt tggggtttct agggtttgta attgggaaag tgcctcttcc ttcgtaagag 2520 agcactttgg atacgtgagg aaatagtttt tcgcatttat tctaaaacga cttggcggag 2580 ccataaaaca ttgtcgtttc gatccggtgt ctctcaactt ttctatgtaa ttggtgtctg 2640 gagtcccata tataggtaag acaccatatg gcagaattgt aattttgaga agaaaattac 2700 tttaattcaa aatccctaaa gcggccattc gtataatatt 2740 //