ID EF060196; SV 1; circular; genomic DNA; STD; VRL; 2781 BP. XX AC EF060196; XX DT 15-NOV-2006 (Rel. 89, Created) DT 23-APR-2008 (Rel. 95, Last updated, Version 2) XX DE Tomato yellow leaf curl virus isolate Moroccan, complete genome. XX KW . XX OS Tomato yellow leaf curl virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2781 RA Boukhatem N., Jdaini S., Muhovski Y., Jacquemin J.M., Del Rincone C.L., RA Diez M.J., Bouali A.; RT "Molecular characterizatoin of Tomato yellow leaf curl virus Alm[Ma:Bk:02] RT in Morocco: complete sequence and genome organization"; RL J. Plant Pathol. 90(1):109-112(2008). XX RN [2] RP 1-2781 RA Boukhatem N., Jdaini S., Bouali A., Jacquemin J.M., Muhovski Y., Diez M.J., RA Del Rincone C.L.; RT ; RL Submitted (12-OCT-2006) to the INSDC. RL Biologie, Faculte des Sciences Oujda, Morocco, Bvd Mohamed VI, BP 524, RL Oujda 60 000, Morocco XX DR MD5; 1c038d77edf169c7e2fec4c79f4b24bf. DR EuropePMC; PMC2224568; 17977971. DR EuropePMC; PMC6164481; 30177671. XX FH Key Location/Qualifiers FH FT source 1..2781 FT /organism="Tomato yellow leaf curl virus" FT /isolate="Moroccan" FT /mol_type="genomic DNA" FT /country="Morocco:Berkane, northeast region" FT /note="Israeli type" FT /db_xref="taxon:10832" FT gene 155..505 FT /gene="V2" FT CDS 155..505 FT /codon_start=1 FT /gene="V2" FT /product="V2 protein" FT /note="precoat protein" FT /db_xref="GOA:A0N094" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:A0N094" FT /protein_id="ABK54300.1" FT /translation="MWDPLLNEFPESVHGFRCMLAIKYLQSVEETYEPNTLGHDLIRDL FT ISVVRARDYVEATRRYNHFHARLEGSPNAELRQPIQQPCCCPHCPRHKQATIMDVQAHV FT PKAQNIQNVSKP" FT gene 315..1091 FT /gene="V1" FT CDS 315..1091 FT /codon_start=1 FT /gene="V1" FT /product="V1 protein" FT /note="coat protein" FT /db_xref="GOA:A0N095" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:A0N095" FT /protein_id="ABK54301.1" FT /translation="MSKRPGDIIISTPVSKVRRTLNFDSPYSSRAAVPIVQGTNKRRSW FT TYRPMYRKPKIYRMYRSPDVPRGCEGPCKVQSYEQRDDIKHTGIVRCVSDVTRGSGITH FT RVGKRFCVKSIYFLGKVWMDENIKKQNHTNQVMFFLVRDRRPYGSSPMDFGQVFNMFDN FT EPSTATVKNDLRDRFQVMRKFHATVIGGPSGMKEQALVKRFFKINSHVTYNHQEAAKYE FT NHTENALLLYMACTHASNPVYATMKIRIYFYDSISN" FT gene complement(1088..1492) FT /gene="C3" FT CDS complement(1088..1492) FT /codon_start=1 FT /gene="C3" FT /product="C3 protein" FT /db_xref="GOA:A0N096" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:A0N096" FT /protein_id="ABK54304.1" FT /translation="MDSRTGELITAPQAENGVFIWEINNPLYFKITEHSQRPFLMNHDI FT ISIQIRFNHNIRKVMGIHKCFLNFRIWRPFQPQTGHFLRVFRYEVLKYLDSLGVISINN FT VIRAVDHVLYDVLENTINVTETHDIKYKFY" FT gene complement(1233..1640) FT /gene="C2" FT CDS complement(1233..1640) FT /codon_start=1 FT /gene="C2" FT /product="C2 protein" FT /db_xref="GOA:A0N097" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:A0N097" FT /protein_id="ABK54303.1" FT /translation="MQPSSPSTSHCSQVSIKVQHKIAKKKPIRRKRVDLDCGCSYYLHL FT NCNNHGFTHRGTHHCSSGREWRFYLGDKQSPLFQDNRTQPAAISNEPRHHFHSDKIQPQ FT HQEGNGDSQMFSQLPNLEAISASDWSFLKSI" FT gene complement(1549..2622) FT /gene="C1" FT CDS complement(1549..2622) FT /codon_start=1 FT /gene="C1" FT /product="C1 protein" FT /note="rep protein" FT /db_xref="GOA:A0N098" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:A0N098" FT /protein_id="ABK54302.1" FT /translation="MPRLFKIYAKNYFLTYPNCSLSKEEALSQLKNLETPTNKKYIKVC FT RELHENGEPHLHVLIQFEGKYQCKNQRFFDLVSPSRAAHFHPNIQGAKSSTDVKTYVEK FT DGDFIDFGVFQIDGRSARGGQQSANDAYAEALNSGNKSEALNILKEKAPKDYILQFHNL FT SSNLDRIFSPPLEVYVSPFLSSSFNQVPDELEEWVAENVVSSAARPWRPISIVIEGDSR FT TGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDWQS FT NTKYGKPIQIKGGNPTIFLCNPGHTSSYREYLDEEKNISLKNWALKNATFVTLYEPLFA FT SINQGPTQDSQEETNKA" FT gene complement(2178..2471) FT /gene="C4" FT CDS complement(2178..2471) FT /codon_start=1 FT /gene="C4" FT /product="C4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:A0N099" FT /protein_id="ABK54305.1" FT /translation="MGNHISMCLSNSKANTNVRTNGSSTWYPQAGQHISIQTFRELRAQ FT QMSRPTWRKTETSLILEFSKSMADQLEEVSNLPTTHMPKHSIQAINPRPSIY" XX SQ Sequence 2781 BP; 763 A; 543 C; 599 G; 876 T; 0 other; taatattacc ggatggccgc gccttttcct tttatgtggt ccccacgagg gttccacaga 60 cgtcactatc aaccaatcaa attgcatact caaacgttaa ataagtgttc atttgtcttt 120 atatacttgg tccccaagta ttttgtcttg caatatgtgg gacccacttc taaatgaatt 180 tcctgaatct gttcacggat ttcgttgtat gctagctatt aaatatttgc agtccgttga 240 ggaaacttac gagcccaata cattgggcca cgatttaatt agggatctta tatccgttgt 300 aagggcccgt gactatgtcg aagcgaccag gcgatataat catttccacg cccgtctcga 360 aggttcgccg aacgctgaac ttcgacagcc catacagcag ccgtgctgct gtccccattg 420 tccaaggcac aaacaagcga cgatcatgga cgtacaggcc catgtaccga aagcccaaaa 480 tatacagaat gtatcgaagc cctgatgttc cccgtggatg tgaaggccca tgtaaagtcc 540 agtcttatga gcaacgggat gatattaagc acactggtat tgttcgttgt gttagtgatg 600 ttactcgtgg atctggaatt actcacagag tgggtaagag gttctgtgtt aaatcgatat 660 attttttagg taaagtctgg atggatgaaa atatcaagaa gcagaatcac actaatcagg 720 tcatgttctt tttggtccgt gatagaaggc cctatggaag cagcccaatg gattttggac 780 aggtttttaa tatgttcgat aatgagccca gtaccgcaac cgtgaagaat gatttgcgtg 840 ataggtttca agtgatgaga aaatttcatg caacagttat tggtgggccc tctggaatga 900 aggaacaggc attagttaag agatttttta aaattaacag tcatgtaact tataatcatc 960 aggaggcagc caagtacgag aaccatactg aaaacgcctt gttattgtat atggcatgta 1020 cgcatgcctc taatccagtg tatgcaacta tgaaaatacg catctatttc tatgattcaa 1080 tatcaaatta ataaaattta tattttatat catgagtttc tgttacattt attgtgtttt 1140 caagtacatc atacaataca tgatcaactg ctctgattac attgttaatg gaaattacac 1200 caagactatc caaatactta agaacttcat atctaaatac tcttaagaaa tgaccagtct 1260 gaggctgaaa tggcctccaa attcggaagt tgagaaaaca tttgtgaatc cccattacct 1320 tcctgatgtt gtggttgaat cttatctgaa tggaaatgat gtcgtggttc attagaaatg 1380 gccgctggct gtgttctgtt atcttgaaat agaggggatt gtttatctcc caaataaaaa 1440 cgccattctc tgcctgagga gcagtgatga gttcccctgt gcgtgaatcc atgattgttg 1500 cagttgaggt ggaggtagta tgagcagcca cagtctaggt ctacacgctt acgccttatt 1560 ggtttcttct tggctatctt gtgttggacc ttgattgata cttgcgaaca gtggctcgta 1620 gagggtgacg aaggttgcat tcttgagcgc ccaatttttc aaggatatat ttttttcttc 1680 gtctagatat tccctatatg aggaggtatg tcctggattg cagaggaaga tagtgggatt 1740 tcccccttta atttgaatgg gcttcccgta ctttgtgttg ctttgccagt ccctctgggc 1800 ccccatgaat tccttgaagt gctttaaata atgcgggtct acgtcatcaa tgacgttgta 1860 ccacgcatca ttactgtaca cctttgggct taggtctaga tgtccacata aataattatg 1920 tgggcctaga gacctggccc acattgtttt gcctgttctg ctatcaccct caattacaat 1980 acttatgggt ctccatggcc gcgcagcgga agacacgacg ttctcagcga cccactcttc 2040 aagttcatct ggaacttgat taaaagaaga agaaagaaat ggagaaacat aaacttctaa 2100 aggaggacta aaaatcctat ctaaatttga acttaaatta tgaaattgta aaatatagtc 2160 ctttggggcc ttctctttta atatattgag ggcctcggat ttattgcctg aattgagtgc 2220 ttcggcatat gcgtcgttgg cagattgctg acctcctcta gctgatctgc catcgatttg 2280 gaaaactcca aaatcaatga agtctccgtc tttctccacg taggtcttga catctgttga 2340 gctcttagct ccctgaatgt ttggatggaa atgtgctgcc ctgcttgggg ataccaggtc 2400 gaagaaccgt tggttcttac attggtattt gccttcgaat tggataagca catggagatg 2460 tggttcccca ttctcgtgga gttctctgca aactttgatg tattttttat ttgttggggt 2520 ttctaggttt tttaattggg aaagtgcttc ctctttagag agagaacaat tgggatatgt 2580 taggaaataa tttttggcat atattttaaa taaacgaggc atgttgaaat gaatcggtgt 2640 ccctcaaagc tctatggcaa tcggtgtatt ggtgtcttat ttatacctgg acacctaatg 2700 gctatttggt aatttcgtaa aagtacattg caattcaaaa ttcaaaattc aaaaatcaaa 2760 tcattaaagc ggccatccgt a 2781 //