ID EF054894; SV 1; circular; genomic DNA; STD; VRL; 2791 BP. XX AC EF054894; XX DT 14-NOV-2006 (Rel. 89, Created) DT 30-DEC-2006 (Rel. 90, Last updated, Version 2) XX DE Tomato yellow leaf curl virus-Mild from Jordan, complete genome. XX KW . XX OS Tomato yellow leaf curl virus - Mild OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2791 RA Anfoka G.H., Haj Ahmad F.W.; RT "Characterization and genome organization of Jordanian isolate of RT TYLCV-Mild"; RL Unpublished. XX RN [2] RP 1-2791 RA Anfoka G.H., Haj Ahmad F.W.; RT ; RL Submitted (10-OCT-2006) to the INSDC. RL Biotechnology, Al-Balqa' Applied University, Al-Salt, Salt 19117, Jordan XX DR MD5; 4d9a0ba56440f52b90065ea72c1b0f47. DR EuropePMC; PMC2224568; 17977971. DR EuropePMC; PMC5796946; 29430354. XX FH Key Location/Qualifiers FH FT source 1..2791 FT /organism="Tomato yellow leaf curl virus - Mild" FT /host="tomato" FT /mol_type="genomic DNA" FT /country="Jordan" FT /db_xref="taxon:220944" FT CDS 148..498 FT /codon_start=1 FT /product="V2" FT /db_xref="GOA:A0MYF7" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:A0MYF7" FT /protein_id="ABK41600.1" FT /translation="MWDPLVNEFPESVHGFRCMLAIKYLQSVEETYEPNTLGHDLIRDL FT ISVVRARDYVEATRRYNHFHARLEGSPKAELRQPIQQPYCCPHCPRHKQATIMDVQAHV FT PKAQNIQNVSKP" FT CDS 308..1084 FT /codon_start=1 FT /product="V1" FT /db_xref="GOA:A0MYF8" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:A0MYF8" FT /protein_id="ABK41599.1" FT /translation="MSKRPGDIIISTPVSKVRRRLNFDSPYSSRTAVPIVQGTNKRRSW FT TYRPMYRKPRIYRMYRSPDVPRGCEGPCKVQSYEQRDDIKHTGIVRCVSDVTRGSGITH FT RVGKRFCVKSIYFLGKVWMDENIKKQNHTNQVMFFLVRDRRPYGSSPMDFGQVFNMFDN FT EPSTATVKNDLRDRFQVMRKFHATVIGGPSGMKEQALVKRFFKINSHVTYNHQEAAKYE FT NHTENALLLYMACTHASNPVYATMKIRIYFYDSISN" FT CDS complement(1081..1485) FT /codon_start=1 FT /product="C3" FT /db_xref="GOA:A0MYF9" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:A0MYF9" FT /protein_id="ABK41597.1" FT /translation="MDSRTGELITAPQAENGVFIWEINNPLYFKITDHSQRQFLMNHDI FT ISIQIRFNHNIRKVLGIHKCFLNFRIWTTLQPQTGRFLRVFRHQVLKYLDSIGVISINN FT IIRAVDHVLYDVLENTIDVTETHDIKYKFY" FT CDS complement(1226..1633) FT /codon_start=1 FT /product="C2" FT /db_xref="GOA:A0MYG0" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:A0MYG0" FT /protein_id="ABK41596.1" FT /translation="MQSSSPSTSHCSQVSIKVQHKIAKKKPIRRKRVDLDCGCSYYLHL FT NCNNHGFTHRGTHHCSSGREWRFYLGDKQSPLFQDNRSQPEAISNEPRHHFHSDKIQPQ FT HQEGIGDSQMFSQLPNLDDITASDWSFLKSI" FT CDS complement(1548..2621) FT /codon_start=1 FT /product="C1" FT /db_xref="GOA:A0MYG1" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:A0MYG1" FT /protein_id="ABK41595.1" FT /translation="MAPPKRFQINCKNYFLTYPHCSLTKEEALSQLKNLETPTNKKYIK FT VCRELHENGEPHLHVLIQFEGKFKCQNQRFFDLVSPSRAAHFHPNIQGAKSSSDVKSYV FT GKDGDTVDWGEFQIDGRSARGGQQSANDAYAAALNSGSKSEALRIIKELVPKAYILQFH FT NLNSNLDRIFQEPPAPYISPFLSSSFNQVPDELEVWVSENVVYSAARPWRPISIVIEGD FT SRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHYKEFMGAQRDW FT QSNTKYGKPIQIKGGIPTIFLCNPGPTSSYREYLDEEKNISLKNWALKNAIFITLYEPL FT FASINQGPTQDSQEETN" FT CDS complement(2162..2464) FT /codon_start=1 FT /product="C4" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:A0MYG2" FT /protein_id="ABK41598.1" FT /translation="MGNHISMCLSNLKGNSSAKIKDSSTWYPQAGQHISTQTFRELNPV FT QTSSLMSVRTETPSTGVSFRSTDDLHVGVSSQPMTLTPQLLTQAVSQRLLESLKN" XX SQ Sequence 2791 BP; 766 A; 543 C; 608 G; 874 T; 0 other; accggatggc cgcgcccttt ctttttatgt ggtccccatg agggttccac agacgtcact 60 gtcaaccaat caaattgcat cctcaaacgt tagataagtg ttcatttgtc tttatatact 120 tggtccccaa gtagtttgtc ttgcaatatg tgggatccac ttgtaaatga atttcctgaa 180 tctgttcacg gatttcgttg tatgttagct attaaatatc tgcagtccgt tgaggaaact 240 tacgagccca atacattggg ccacgattta attagggatc ttatatctgt tgtaagggcc 300 cgtgactatg tcgaagcgac caggcgatat aatcatttcc acgcccgtct cgaaggttcg 360 ccgaaggctg aacttcgaca gcccatacag cagccgtact gctgtcccca ttgtccaagg 420 cacaaacaag cgacgatcat ggacgtacag gcccatgtac cgaaagccca gaatatacag 480 aatgtatcga agccctgatg ttccccgtgg atgtgaaggc ccatgtaaag tccaatctta 540 tgagcaacgg gatgatatta agcacactgg tattgttcgt tgtgttagtg atgttactcg 600 tggatctgga attactcaca gagtgggtaa gaggttctgt gttaaatcga tatatttttt 660 aggtaaagtc tggatggatg aaaatatcaa gaagcagaat cacactaatc aggtcatgtt 720 ctttttggtc cgtgatagaa ggccctatgg aagcagccca atggattttg gacaggtttt 780 taatatgttc gataatgagc ccagtaccgc aaccgtgaag aatgatttgc gtgataggtt 840 tcaagtgatg aggaaatttc atgcaacagt tattggtggt ccctctggaa tgaaggaaca 900 ggcattagtt aagagatttt ttaaaattaa cagtcatgta acttataatc atcaggaggc 960 agccaagtac gagaaccata ctgaaaacgc cttgttattg tatatggctt gtacgcatgc 1020 ctctaatcca gtgtatgcaa ctatgaaaat acgcatctat ttctatgatt caatatcaaa 1080 ttaataaaat ttatatttta tatcatgagt ttctgttaca tctattgtgt tttcaagtac 1140 atcatacaat acatgatcaa ctgctctgat tatattgtta attgaaatta caccaatact 1200 atctaaatac ttaagaactt gatgtctaaa tactcttaag aaacgaccag tctgaggctg 1260 taatgtcgtc caaattcgga agttgagaaa acatttgtga atccccaata ccttcctgat 1320 gttgtggttg aatcttatct gaatggaaat gatgtcgtgg ttcattagaa attgcctctg 1380 gctgtgatct gttatcttga aatagagggg attgtttatc tcccagataa aaacgccatt 1440 ctctgcctga ggagcagtga tgagttcccc tgtgcgtgaa tccatgattg ttgcagttga 1500 ggtggaggta gtatgagcag ccacagtcta ggtctacacg cttacgccta attggtttct 1560 tcttggctat cttgtgttgg accttgattg atacttgcga acagtggctc gtagagggtg 1620 atgaagattg cattcttgag agcccaattt ttcaaggata tgtttttttc ttcgtctaga 1680 tattccctat atgaggaggt aggtcctgga ttgcagagga agatagtggg aattccccct 1740 ttaatttgaa tgggcttccc gtactttgtg ttgctttgcc agtccctctg ggcccccatg 1800 aattccttgt agtgctttaa ataatgcggg tctacgtcat caatgacgtt gtaccacgca 1860 tcattactgt acacctttgg gcttaggtct agatgtccac ataaataatt atgtgggcct 1920 agagacctgg cccacattgt tttgcccgtt ctgctatcac cctcaatgac aatacttatg 1980 ggtctccatg gccgcgcagc ggaatacacg acgttctcgg acacccatac ttcaagttca 2040 tctggaactt gattaaaaga tgaagataaa aagggagaaa tataaggagc cggaggctcc 2100 tgaaaaattc tatctaaatt actatttaaa ttatgaaact gtaaaatata agcttttggt 2160 actaattctt taatgattct aagagcctct gacttactgc ctgagttaag agctgcggcg 2220 taagcgtcat tggctgactg ctgaccccca cgtgcagatc gtccgtcgat ctgaaactca 2280 ccccagtcga cggtgtctcc gtccttaccg acataagact tgacgtctga actggattta 2340 gctccctgaa tgtttgggtg gaaatgtgct gccctgcttg gggataccag gtcgaagaat 2400 ctttgatttt ggcacttgaa tttcccttca aattggataa gcacatggag atgtggttcc 2460 ccattctcgt ggagttctct gcaaactttg atgtattttt tatttgttgg tgtttctagg 2520 ttttttaatt gggaaagtgc ttcttctttt gttaaggagc aatgaggata tgtgaggaaa 2580 taatttttgc aatttatttg gaagcgctta ggaggagcca tatggtcaat gagtaccgat 2640 tgaccaagat ttttacactt atccctggtg tatcggtact caatatatag tgagtaccga 2700 atggcatttt ggtaattaca taaaagtaca ttgcaattca aaaatcaaaa ttcaaaaatc 2760 aaatcattaa agcggccatc cgtataatat t 2791 //