Dbfetch
ID EF043232; SV 1; circular; genomic DNA; STD; VRL; 2693 BP. XX AC EF043232; XX DT 11-DEC-2006 (Rel. 90, Created) DT 11-DEC-2006 (Rel. 90, Last updated, Version 1) XX DE Tomato leaf curl New Delhi virus - [Potato] isolate Meerut segment DNA B, DE complete sequence. XX KW . XX OS Tomato leaf curl New Delhi virus - [Potato] OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2693 RA Sumiya K.V., Malathi V.G.; RT ; RL Submitted (05-OCT-2006) to the INSDC. RL Division of Plant Pathology, Indian Agricultural Research Institute, Pusa RL Campus, New Delhi, Delhi 110012, India XX DR MD5; 39ec261550e9455b0d195039e2ec2d07. DR EuropePMC; PMC3125359; 21676270. XX FH Key Location/Qualifiers FH FT source 1..2693 FT /organism="Tomato leaf curl New Delhi virus - [Potato]" FT /segment="DNA B" FT /host="potato" FT /isolate="Meerut" FT /mol_type="genomic DNA" FT /country="India" FT /collection_date="2005" FT /db_xref="taxon:270145" FT gene 440..1246 FT /gene="BV1" FT CDS 440..1246 FT /codon_start=1 FT /gene="BV1" FT /product="nuclear shuttle protein" FT /db_xref="GOA:A1DRZ8" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR001530" FT /db_xref="UniProtKB/TrEMBL:A1DRZ8" FT /protein_id="ABL09085.1" FT /translation="MAFPSPYATPRRSGYSYNRTYNGNKSFRLWKTRKSQNWNRYRSTH FT SVPRSPTELFGDPISKQYTRKEICETQEGLEYLLHNNRYMTSYVTYPAKTRTGTNNRVR FT SYIKLKGLNISGTFAVRKSDLMTEVVQTNGLYGVMSVVVVRDKSPKIYSTTQPLIPFVE FT LFGSVNACRGSLKVAERHHDRFVLLNQTSIVVNTPYSNAIKKFCIRNCIPRTYTTWVTF FT KDEEEDSCTGLYSNTLRNAIILYYVWLSDVSSQVDLYSNVILNYIG" FT gene complement(1297..2148) FT /gene="BC1" FT CDS complement(1303..2148) FT /codon_start=1 FT /gene="BC1" FT /product="movement protein" FT /db_xref="GOA:A1DRZ9" FT /db_xref="InterPro:IPR000211" FT /db_xref="UniProtKB/TrEMBL:A1DRZ9" FT /protein_id="ABL09086.1" FT /translation="MSITNEGMGMGVGGYIQSARVEYALTNDAAEVTLSFPSMFEQKIS FT QLRNRCMKIDHVVLEYRSQVPINAVGHVVIEIHDMRLTEGDTKQAEFTIPIKCNCNLHY FT YSSSFFSLKDKNPWRVEYRVENTNVVNGVHFCKMLGKLKLSSAKHSTEVEFRPPKIEIH FT TKEFTVNDIDFWSVGSKPQTRRLVDGSRLMGHSSRSLRVPYLAIGPNESWASRSEIGHS FT SVTSRPYKHLNGLDDSAIDPGPSASQAGSITRDDIADIIKKTVEQCIKSNVNAPISKGV FT " XX SQ Sequence 2693 BP; 779 A; 596 C; 503 G; 815 T; 0 other; accgaatggc cgcgaaaatt tttcccccgc atcatgaccg ctgctgcgta atcattgcac 60 gccgatatcc gtccgatttg caacacgtgt attccattaa cagactttat gcaaataaac 120 gtctcatatc cgcgtccaca ttgcatatgt ggtcccatac atcttttcgt acatctaata 180 tgtgcgcttg tggtcccctg cactatctaa agtcatcatg ataaattgta gtgcgttctc 240 tgctgtctta attttgatcg gtcgagatca aaactaaaat gtgcccaaca tatccgtcgt 300 ccgatcttat gagatatgcg ttaattcaaa caatacttgt tagaatttta ttcatgccgt 360 acaatactaa ttcagaaaac tgctacttat atgatattac atgatgctgt tagtgccaga 420 catttcttat cccagctaaa tggcttttcc ttctccttat gcaacacctc gccgttccgg 480 ttactcatac aacagaacat acaacggaaa caagagtttc cgcttgtgga agacccggaa 540 gtcccaaaac tggaatcgct atcggagtac tcattccgtc ccacgttctc caactgaact 600 gtttggcgat ccaatctcta aacaatatac gcgtaaggaa atatgtgaaa cacaggaggg 660 attggagtat ctgctgcaca acaatcgtta catgacgtca tatgtcacgt atccagctaa 720 aacaagaact ggaacgaaca accgcgttcg ctcctatatc aagctaaagg gtctgaacat 780 atctggcaca tttgctgttc gtaaatctga tttgatgacc gaagtagtgc aaactaatgg 840 actatacgga gtgatgtctg tagttgtagt ccgcgataaa tctccaaaga tttattcaac 900 gacccaaccc ttaataccgt ttgttgagct atttggatct gttaatgctt gcaggggaag 960 tttgaaagtt gcagaacgcc accatgaccg tttcgtactg ctgaatcaaa catccatcgt 1020 cgtcaatacc ccatattcta acgctatcaa gaaattctgc attcgtaact gcatcccaag 1080 aacttacaca acttgggtaa cgtttaagga cgaagaagaa gatagctgta ctggactata 1140 ttcaaacacc cttagaaatg caattatatt atattatgta tggttaagcg atgtatcctc 1200 acaagtcgat ctctatagca atgtaatcct caattacatt ggttgatcta agaaaatgca 1260 atactaacat tttatttatg aataaattcg gcttaaaatt tattacacgc cctttgatat 1320 tggagcattt acattagatt ttatacattg ctctacagtc ttcttaatta tatcggcaat 1380 gtcatctctc gtaatactcc ccgcttgtga tgccgatggc cctggatcga ttgccgaatc 1440 gtccaatccg ttcaggtgtt tatagggtct gctggtgacg gacgaatgtc cgatctccga 1500 tctgcttgcc catgattcgt tcggacctat tgccaaatat ggtactcgta acgatcttga 1560 actatgtccc attaaccttg aaccatctac aagacgcctt gtttgtggtt tggaacccac 1620 tgaccaaaaa tcaatatcgt tcacggtgaa ttccttcgtg tgtatttcta tctttggtgg 1680 tcggaattcg acttcagtcg aatgttttgc cgacgacagc ttcaatttcc ctagcatctt 1740 acagaagtgt actccattaa cgacgtttgt gttttccact cggtattcaa ctctccaagg 1800 attcttatcc ttgagagaga agaatgagga agagtagtag tgcaggttgc aattgcattt 1860 gatcggaatt gtgaattctg cttgttttgt gtccccctcc gtcaatctca tgtcgtgtat 1920 ctctatcacg acatgaccaa cagcattaat tggaacctga ctgcgatatt ccagtaccac 1980 gtgatctatt ttcatgcatc tattcctcaa ctggctaatt ttctgctcga acatggacgg 2040 aaatgacaag gtgacttctg cagcatcatt tgtgagcgcg tactcaacgc gcgcagattg 2100 gatataccca cctactccca tacccatccc ttcatttgtt attgacatat tggccgcgca 2160 gcgcaacacc cactgaaacg cagaaagaca gactacgatc aaagaaaccc caaggaagaa 2220 gaaaccctag caaacaacta agttgttttg caaagaactg aggtagatgg ttttataatt 2280 ctttagcatg tcatgtctat gtcataacaa agaccctcaa atgaacggca catatttttg 2340 tacaaaaaag tagttgtgcc tgcatatcga agatctattt attgtaggta tatatggaaa 2400 gcccaattta tgttaattgg gctgaagtat attttcagaa gaagcccatg aaaatggccc 2460 agcatctaag tctatttgat aaaacgacat cgcttgtggt atggtttgtt tataaaaaat 2520 agagagaagc agcagtttct ctctctagaa ctgatctggt gtctctcaac tctctctatg 2580 taattggtgt ctggagtcct atatataggt aagacaccat atggcagaat tgtaattttg 2640 aaaagaaaat tactttaatt caaattccct aaagcggcca ttcgtataat att 2693 //