ID EF043231; SV 1; circular; genomic DNA; STD; VRL; 2740 BP. XX AC EF043231; XX DT 11-DEC-2006 (Rel. 90, Created) DT 11-DEC-2006 (Rel. 90, Last updated, Version 1) XX DE Tomato leaf curl New Delhi virus - [Potato] isolate Meerut segment DNA A, DE complete sequence. XX KW . XX OS Tomato leaf curl New Delhi virus - [Potato] OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2740 RA Sumiya K.V., Malathi V.G.; RT ; RL Submitted (05-OCT-2006) to the INSDC. RL Division of Plant Pathology, Indian Agricultural Research Institute, Pusa RL Campus, New Delhi, Delhi 110012, India XX DR MD5; fc15a4bf2fb8e58ff5ad114263d0cd21. DR EuropePMC; PMC3125359; 21676270. XX FH Key Location/Qualifiers FH FT source 1..2740 FT /organism="Tomato leaf curl New Delhi virus - [Potato]" FT /segment="DNA A" FT /host="potato" FT /isolate="Meerut" FT /mol_type="genomic DNA" FT /country="India" FT /collection_date="2005" FT /db_xref="taxon:270145" FT gene 120..461 FT /gene="AV2" FT CDS 120..458 FT /codon_start=1 FT /gene="AV2" FT /product="pre-coat protein" FT /db_xref="GOA:A1DRZ1" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:A1DRZ1" FT /protein_id="ABL09097.1" FT /translation="MWDPLLHEFPESVHGLRCMLAVKYLQEIEKNYSPDTVGYDLVRDL FT ILVLRAKNYGEATSRYHLFNARIESTPTSQLRQPLWSSCSCPHCPRHKSKGLDQQADEQ FT KTQNVQNV" FT gene 280..1053 FT /gene="AV1" FT CDS 280..1050 FT /codon_start=1 FT /gene="AV1" FT /product="coat protein" FT /db_xref="GOA:A1DRZ2" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:A1DRZ2" FT /protein_id="ABL09096.1" FT /translation="MVKRPADIIFSTPVSKVRRRLNFDSPFGARAVVPIARVTKAKAWT FT NRPMNRKPRMYRMYSSPDVPRGCEGPCKVQSFESRHDVSHIGKVMCVSDVTRGSGLTHR FT VGKRFCVKSVYVLGKIWMDENIKTKNHTNSVMFFLVRDRRPTGSPRDFGEVFNMFDNEP FT STATVKNMHRDRYQVLRKWHATVTGGTYASKEQALVRKFVRVNNYVVYNQQEAGKYENH FT TESALMLYMACTHASNPVYATLKIRIYFYDSVTN" FT gene complement(310..795) FT /gene="AC5" FT CDS complement(310..795) FT /codon_start=1 FT /gene="AC5" FT /product="AC5 protein" FT /db_xref="InterPro:IPR006892" FT /db_xref="InterPro:IPR013671" FT /db_xref="UniProtKB/TrEMBL:A1DRZ3" FT /protein_id="ABL09102.1" FT /translation="MHVLHRCCARFIVKHVKNFPKISWRSCRTTVTDQKKHDTVSMVFC FT LDVFIHPYLPQHIDRFHTKSLPYAMCESRSSGNITNTHDFANMRDIVPRFKGLHLTRAF FT TAPWHVGTTIHSVHSGFSVHRPVGPGLCFCDAGNGDNCTSSKGAVEVETSAYFRYGR" FT gene complement(1177..1596) FT /gene="AC2" FT CDS complement(1177..1596) FT /codon_start=1 FT /gene="AC2" FT /product="transcriptional activator protein" FT /db_xref="GOA:A1DRZ4" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:A1DRZ4" FT /protein_id="ABL09099.1" FT /translation="MQSLSHSKNHSIPVAKTSLPQKKKKSIRRRRVDLQCGCTYYISIN FT YHDHGFTHRGVHHCGSSREWRIYLGNSKSPVFQNFETQQQTLPKTARHHQYSNIIQPQP FT AESPGTSQVFSNFQNLDGLTPSDWDFLESLQNTGP" FT gene complement(1299..1457) FT /gene="AC3" FT CDS complement(1299..1457) FT /codon_start=1 FT /gene="AC3" FT /product="replication enhancer protein" FT /db_xref="GOA:A1DRZ5" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:A1DRZ5" FT /protein_id="ABL09100.1" FT /translation="MITDSRTGESITADRAESGVYTWEIRNPLYFKILKHNSRPFLRQH FT DIISIQI" FT gene complement(1499..2584) FT /gene="AC1" FT CDS complement(1499..2584) FT /codon_start=1 FT /gene="AC1" FT /product="replication initiator protein" FT /db_xref="GOA:A1DRZ6" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:A1DRZ6" FT /protein_id="ABL09098.1" FT /translation="MAPPRRFRINAKNYFLTYPKCSLTKEDALSQLQTLETPTAKKFIK FT ICRELHEDGSPHIHVLIQFEGKFQCKNNRFFDLVSPSRSAHFHPNIQGAKSASDVKQYI FT DKDGDVLEWGVFQIDGRSARGGQQTANDAYAQAINTGNKDDALKVLKELAPKDYVLQFH FT NLNTNLDRIFQPPSEIYVSPFSISSFDRVPPELVDWVSSNVVCAAARPFRPISIVIEGD FT SRTGKTMWARCLGPHNYLCGHLDLSPKVYSNEAWYNVIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPVMIKGGIPTIFLCNKGPNTSYKEYLDEEKNAALKQWAIKNAVFITLEEPL FT YSGRENITPTEEEEEHSQEAS" FT gene complement(2251..2427) FT /gene="AC4" FT CDS complement(2251..2427) FT /codon_start=1 FT /gene="AC4" FT /product="AC4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:A1DRZ7" FT /protein_id="ABL09101.1" FT /translation="MGLRISMFSSNSKGNSSAKITDSSTWFPQVGQHISIRTFRELNQH FT RTSNSTSTKMETF" XX SQ Sequence 2740 BP; 738 A; 583 C; 614 G; 805 T; 0 other; accgaatggc cgcgcaaatt tttaagtggg tcctcaacca atgaaattcg agctacatgg 60 cttctttgct gcgtggggac caataaatag acttactcac caagtttgga tccacaaaca 120 tgtgggatcc attattgcac gaatttccag aaagcgttca tggtctaagg tgcatgttag 180 ctgtaaaata tctccaagag atagaaaaga actattcccc agacacagtc ggctacgatc 240 ttgtccgaga tctcattctt gttcttcgag caaagaacta tggtgaagcg accagcagat 300 atcatctttt caacgcccgt atcgaaagta cgccgacgtc tcaacttcga cagccccttt 360 ggagctcgtg cagttgtccc cattgcccgc gtcacaaaag caaaggcctg gaccaacagg 420 ccgatgaaca gaaaacccag aatgtacaga atgtatagta gtcccgacgt gccaaggggc 480 tgtgaaggcc cttgtaaggt gcagtccttt gaatctaggc acgatgtctc tcatattggc 540 aaagtcatgt gtgttagtga tgttacccga ggatctggac tcacacatcg cgtagggaag 600 cgattttgtg tgaaatctgt ctatgtgctg gggaagatat ggatggatga aaacatcaag 660 acaaaaaacc atactaacag tgtcatgttt tttttggtcc gtgaccgtcg tcctacagga 720 tctccacgag attttgggga agtttttaac atgtttgaca atgaaccgag cacagcaacg 780 gtgaagaaca tgcatcgtga tcgttatcaa gtcttacgga agtggcatgc tactgtgacg 840 ggaggaacat atgcatctaa ggagcaagca ttagttagga agtttgttag ggttaataat 900 tatgttgtct ataaccaaca agaggccggc aagtatgaga atcatactga gagcgcatta 960 atgttgtata tggcctgtac tcatgcatca aatcctgtgt atgctacttt gaaaatccgg 1020 atctatttct atgattcggt aacaaattaa taaatatcga gttttatatc atatgaagtc 1080 catacatcaa tcgtttgttc cattacatta tccaaaacat gataaactgc tcttattaca 1140 ttataaattc ctattacacc aagcctatcc aggtacctaa ggacctgtgt tttgaagact 1200 ctcaagaaaa tcccaatctg agggcgtaag cccgtccaga ttttgaaagt tagaaaacac 1260 ttgtgaagtc ccagggcttt ccgcaggttg tggttgaatt atatttgaat actgatgatg 1320 tcgtgctgtc ttaggaaggg tctgctgttg tgtttcaaaa ttttgaaata caggggattt 1380 cgaatttccc aggtatatac gccactctct gctcgatccg cagtgatgga ctcccctgtg 1440 cgtgaatccg tgatcatggt agtttatgga tatgtaatac gtacacccac actgcagatc 1500 aactcgcctc ctgcgaatgc tcttcttctt cttctgtggg agtgatgttt tcgcgaccgg 1560 aatagagtgg ttcttcgagt gtgataaaga ctgcattctt gattgcccac tgcttcagtg 1620 ctgcgttttt ttcttcgtcc agatattcct tatagctggt gtttggacct ttattgcaca 1680 ggaagatagt gggaattcca cctttaatca tgactggctt tccgtacttc gtgttgcttt 1740 gccagtcacg ctgggccccc atgaattctt taaaatgctt tagatagtgt ggatcaacgt 1800 catcaatgac gttgtaccag gcctcattgc tatagacctt tgggctcaga tcaagatgtc 1860 cacacaagta attgtggggt cctaaacaac gagcccacat tgttttgccc gttctactat 1920 ccccctctat gactatgctt atgggcctga aaggccgcgc agcggcacac accacattgg 1980 acgagaccca atcgacgagt tctggcggaa ctctgtcgaa ggatgaaatt gaaaatggag 2040 aaacataaat ctcagaagga ggttgaaaaa tgcgatctaa attggtgttt aaattgtgaa 2100 actgcagaac ataatccttt ggggctaatt cctttagtac cttcaacgca tcgtctttat 2160 ttcccgtgtt aatcgcctga gcatatgcat cgttcgccgt ttgttgacca ccacgagcag 2220 atcgtccatc gatctggaaa acaccccatt ctagaacgtc tccatctttg tcgatgtact 2280 gtttgacgtc cgatgctgat ttagctccct gaatgttcgg atggaaatgt gctgaccgac 2340 ttggggaaac caagtcgaag aatctgttat ttttgcactg gaatttccct tcgaattgga 2400 tgagaacatg gatatgcgga gacccatcct cgtgaagctc tctacagatc ttaatgaatt 2460 ttttcgcagt tggggtttct agggtttgca gttgggaaag tgcgtcctcc ttagttagag 2520 agcacttcgg atatgtgagg aaatagtttt tggcatttat tctaaaacga cgtggcggag 2580 ccataaaact tgtcgttttg atccggcgtc cctcatcttc ttctatgtaa ttggtgtctg 2640 gagtcccata tataggtaag acaccatatg gcagaattgt aattttgaaa agaaaattac 2700 tttaattcaa attccctaaa gcggccattc gtataatatt 2740 //