ID EF035482; SV 2; linear; genomic DNA; STD; VRL; 2740 BP. XX AC EF035482; XX DT 03-JAN-2007 (Rel. 90, Created) DT 05-AUG-2007 (Rel. 92, Last updated, Version 2) XX DE Tomato leaf curl New Delhi virus AV3 protein (AV3), pre-coat protein (AV2), DE and coat protein (AV1) genes, complete cds. XX KW . XX OS Tomato leaf curl New Delhi virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2740 RA Venkataramana R., Jalali S., Krishnareddy M.; RT "Molecular characterization and genetic diversity of Begomoviruses RT infecting Okra in India"; RL Unpublished. XX RN [2] RP 1-2740 RA Venkataramana R., Jalali S., Krishnareddy M.; RT ; RL Submitted (03-OCT-2006) to the INSDC. RL Division of Plant Pathology, Indian Institute of Horticultural Research, RL Hessaraghatta Lake PO, Bangalore, Karnataka 560089, India XX RN [3] RC Sequence update by submitter RP 1-2740 RA Venkataravanappa V., Jalali S., Krishnareddy M.; RT ; RL Submitted (02-AUG-2007) to the INSDC. RL Division of Plant Pathology, Indian Institute of Horticultural Research, RL Hessaraghatta Lake PO, Bangalore, Karnataka 560089, India XX DR MD5; 12bfc7c91e77d16515a9d1abe1537313. DR EuropePMC; PMC3125359; 21676270. XX CC On Aug 2, 2007 this sequence version replaced gi:120431221. XX FH Key Location/Qualifiers FH FT source 1..2740 FT /organism="Tomato leaf curl New Delhi virus" FT /segment="A" FT /host="okra cultivar Parbhani Kranthi" FT /lab_host="tomato" FT /isolate="OY142" FT /mol_type="genomic DNA" FT /country="India:Udayapur, Rajasthan" FT /isolation_source="leaf" FT /db_xref="taxon:223347" FT gene 41..427 FT /gene="AV3" FT CDS 41..427 FT /codon_start=1 FT /gene="AV3" FT /product="AV3 protein" FT /db_xref="UniProtKB/TrEMBL:A1YJD5" FT /protein_id="ABM21599.2" FT /translation="MKFGLHGFYNAYGAINRLAHQVWIHKHVGSIIARISRKRSWSKVH FT ASCKISSRDREELFPRHSRLRSCPRSDSCSSSKELCRSDQQISSFQRPHRKYADVSTST FT APMELVQLSPLPASQKQSHGPTGR" FT gene 120..458 FT /gene="AV2" FT CDS 120..458 FT /codon_start=1 FT /gene="AV2" FT /product="pre-coat protein" FT /db_xref="GOA:A1YJD6" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:A1YJD6" FT /protein_id="ABM21600.2" FT /translation="MWDPLLHEFPESVHGLRCMLAVKYLQEIEKNYSPDTVGYDLVRDL FT ILVLRAKNYVEATSRYRHFNARIESTPTSQLRQPLWSSCSCPHCPRHKSKVMDQQADEQ FT KTQNVQNV" FT gene 280..1053 FT /gene="AV1" FT CDS 280..1050 FT /codon_start=1 FT /gene="AV1" FT /product="coat protein" FT /db_xref="GOA:A1YJD7" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:A1YJD7" FT /protein_id="ABM21601.1" FT /translation="MSKRPADIVISTPASKVRRRLNFDSPYGARAVVPIARVTKAKSWT FT NRPMNRKPRMYRMYRSPDVPRGCEGPCKVQSFESRHDVSHIGKVMCVSDVTRGTGLTHR FT VGKRFCVKSVYLQGKIWMDENIKTKNHTNSVMFFLVRDRRPTGTPQDFGEVFNMFDNEP FT STATVKNMHRDRYQVLRKWHATVTGGTYASREQALVRKFVRVNNYVVYNQQEAGKYENH FT TENALMLYMACTHASNPVYATLKIRIYFYDSVTN" XX SQ Sequence 2740 BP; 758 A; 584 C; 600 G; 798 T; 0 other; accgaatggc cgcgcaaatt tttaggtggg acctcaacca atgaaattcg ggctacatgg 60 cttctataat gcatatggag caataaatag acttgctcac caagtttgga tccacaaaca 120 tgtgggatcc attattgcac gaatttccag aaagcgttca tggtctaagg tgcatgctag 180 ctgtaaaata tcttcaagag atagagaaga actattcccc agacacagtc ggttacgatc 240 ttgtccgaga tctgattctt gttcttcgag caaagaacta tgtcgaagcg accagcagat 300 atcgtcattt caacgcccgc atcgaaagta cgccgacgtc tcaacttcga cagcccctat 360 ggagctcgtg cagttgtccc cattgcccgc gtcacaaaag caaagtcatg gaccaacagg 420 ccgatgaaca gaaaacccag aatgtacaga atgtatagaa gtcccgacgt gccaaggggc 480 tgtgaaggcc cctgcaaagt gcagtctttt gaatcgaggc acgatgtatc tcatatcggt 540 aaagttatgt gtgttagtga tgttacccga ggaaccggac tcacacatcg cgtagggaag 600 cgattttgtg tgaaatctgt ctatctgcag ggaaagattt ggatggatga aaacatcaag 660 acgaaaaacc atactaatag tgtcatgttt tttttagttc gtgaccgtcg tcctacagga 720 acccctcaag atttcgggga agtgtttaat atgtttgaca atgaaccgag cacagcaacg 780 gtgaagaaca tgcatcgtga tcgttatcaa gtcttacgga agtggcatgc aactgtgacc 840 ggaggaacat acgcatctag ggagcaagca ttagttagga agtttgttag ggttaataat 900 tatgttgttt ataatcaaca agaggccggc aagtatgaga atcatactga aaacgcatta 960 atgttgtata tggcctgtac tcacgcatca aatcctgtgt atgctacttt gaaaatccgg 1020 atctactttt atgattcggt cacaaattaa taaatatcta gttttatatc atatgaagtc 1080 catacatcaa ttgttcgctc caatacatta tccaatacat gataaactgc tcttattaca 1140 ttataaattc ctatgacacc taacatatcc aggtacttaa ggacctgggt tttgaagact 1200 ctcaagaaaa tcccaatctg agggcgtaag cccgtccaga ttttgaaagt tagaaaacac 1260 ttgtgaagtc ccagggcttt ccgcaggttg tggttgaact gtatttgaat cttgattatg 1320 tcgtgctgtg ttaggaaggg ccggctgtcg tgtttcaaaa ttttgaaata caggggattt 1380 cgaatttccc aggtatatac gccactctct gctcgatcca cagtgatgta ttcccctgtg 1440 cgtgaatccg tgatcatggc agttgatcga tgtgtaatac gaacaaccac acggtagatc 1500 aactcgcctc ctgcgaatgc tcttcttctt cttctggggg agcgatgatt tcgcgaccgg 1560 aatagagtgg ttcctcgagt gtgatgaaga ctgcattctt gattgtccac tgcttcagtg 1620 ctgcattttt ttcttcatcc agatattcct tatagctgct gtttggacct ttattgcaca 1680 ggaagatagt gggaattcca cctttaatca tgaccggctt tccgtacttc gtattgcttt 1740 gccagtcacg ctgggccccc atgaattctt taaaatgctt tagatagtgg ggatcgacgt 1800 catcaatgac gttgtaccat gcatcattgc tatacacctt tgggctcaga tctagatgtc 1860 cacacaagta attgtgtggt cctaagcaac gagcccacat tgttttgccc gtcctactat 1920 ccccctctat gactacactt attggtctaa aaggccgcgc agcggcacac actacattcg 1980 acgagaccca atcgacgagt tctggcggaa ctctgtcgaa ggataaaatt gaaaatggag 2040 aaacataaat ctcggaacga ggttgaaaaa tgcgatctaa atttgtaatt aaattgtgaa 2100 actgcagaac ataatccttt ggtgcaaatt cctttaatac tttcaaggca tcatctttat 2160 ttcctgtgtt aatcgcctga gcatatgcat cgtttgctgt tttctgacca ccacgagcag 2220 atcgtccatc gatctggaaa acaccccact ctacgacgtc tccgtctttg tcgatgtacg 2280 ctttgacgtc cgatgctgat ttagctccct gaatgttcgg atggaaatgt gctgaccgac 2340 ttggggacac caagtcgaag aatctgttat tcttgcattg gaattttccc tcgaattgga 2400 taagaacatg gatatgcggt gacccatcct catgaagctc tggacagatc ttgatgaatt 2460 tcttcgaagt gggggtttct agggtttgca attgggaaag tgcctcttcc tttgtaagag 2520 agcactttgg atatgtgagg aagtagtttt ttgcatttat tctaaaacga cttggcggag 2580 ccataaaact tgtcgtttcg atccggtgtc tctcaacttt ctctatgtaa ttggtgtctg 2640 gagtcccata tataggtaag acaccatatg gcataattgt aatttcagaa aagaaattac 2700 tttaattcaa attcactaaa gcggccattc gtataatatt 2740 //