ID   EF026046; SV 1; linear; genomic RNA; STD; VRL; 1184 BP.
XX
AC   EF026046;
XX
DT   06-JUL-2007 (Rel. 92, Created)
DT   06-JUL-2007 (Rel. 92, Last updated, Version 1)
XX
DE   Melaka orthoreovirus segment S4, complete sequence.
XX
KW   .
XX
OS   Melaka orthoreovirus
OC   Viruses; Riboviria; Reoviridae; Spinareovirinae; Orthoreovirus;
OC   unclassified Orthoreovirus.
XX
RN   [1]
RP   1-1184
RX   DOI; 10.1073/pnas.0701372104.
RX   PUBMED; 17592121.
RA   Chua K.B., Crameri G., Hyatt A., Yu M., Tompang M.R., Rosli J.,
RA   McEachern J., Crameri S., Kumarasamy V., Eaton B.T., Wang L.F.;
RT   "A previously unknown reovirus of bat origin is associated with an acute
RT   respiratory disease in humans";
RL   Proc. Natl. Acad. Sci. U.S.A. 104(27):11424-11429(2007).
XX
RN   [2]
RP   1-1184
RA   Yu M., Chua K.B., Wang L.-F.;
RT   ;
RL   Submitted (26-SEP-2006) to the INSDC.
RL   Australian Animal Health Laboratory, CSIRO Livestock Industries, 5
RL   Portarlington Road, Geelong, VIC 3220, Australia
XX
DR   MD5; 380d897d251fb5c2fc5e5307e69ceb5b.
DR   EuropePMC; PMC1899191; 17592121.
XX
CC   GenBank Accession Numbers EF026043-EF026046 represent the S
CC   segments of the Melaka orthoreovirus genome.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1184
FT                   /organism="Melaka orthoreovirus"
FT                   /segment="S4"
FT                   /mol_type="genomic RNA"
FT                   /country="Malaysia"
FT                   /note="S-class"
FT                   /db_xref="taxon:419697"
FT   CDS             30..1115
FT                   /codon_start=1
FT                   /product="sigma 2"
FT                   /note="major outer capsid protein"
FT                   /db_xref="GOA:A6Y7R6"
FT                   /db_xref="InterPro:IPR000153"
FT                   /db_xref="InterPro:IPR023634"
FT                   /db_xref="UniProtKB/TrEMBL:A6Y7R6"
FT                   /protein_id="ABM67660.1"
FT                   /translation="MEVRTPNFHSFVESAYSSYLTRPDTWNPSTLWETGQFVTPDVIRL
FT                   GNAYCCAQCCGVLYYGYRPINLYPFPHHRCHQLHRRETSPLLKVVRVGRTTDMVREHYA
FT                   VWLQSLVDHLSDEKNIQDKEPMSSRVASEVLRNDVAISGDFWRGTLDLSPHDSARSIHD
FT                   SMDKLSEVAGTHGLLPDCLLNVATHDHTALKMTAPVLNIYDQLDNARRSVLSATVTQMP
FT                   KETADAHKLQGHVTKEVAAAALLKPEHVIVTPIMAGLPVLARSHQPSLRVGMPLVESTQ
FT                   KASLYRSLPHQLAHGYHSDTFRTMFGLSANEAESRLIGHHRTMLCTLPAIETSPTAVAR
FT                   ATTSPLSIVSSDKVTMHECSG"
XX
SQ   Sequence 1184 BP; 257 A; 335 C; 278 G; 314 T; 0 other;
     gcttattttg tcttggcgcg caagcccaga tggaggtgag aacgcccaac ttccactcgt        60
     tcgttgaatc agcttattcc agttacttga ctagaccaga tacgtggaat ccatcaaccc       120
     tatgggagac aggtcaattc gtcacacctg acgtcatccg cctcggtaat gcgtactgct       180
     gcgctcagtg ctgtggagtc ttatactatg gatatagacc catcaacctg tatccgtttc       240
     cacatcatcg ctgtcatcag ctgcatcgac gtgaaaccag cccgctcttg aaggtcgttc       300
     gtgtgggacg caccacggat atggttcgcg aacattacgc tgtgtggctt cagtctctgg       360
     ttgatcatct gtcagatgag aaaaatatcc aggataagga acctatgtct tctcgtgtgg       420
     ccagtgaggt gctgcgtaat gatgtggcta tttccggtga cttttggcgc ggcactttgg       480
     atttatcgcc acatgactcc gctcggtcca tccacgactc tatggataag ctgtctgagg       540
     ttgctggcac ccatggtctt ctgcctgact gtctgctaaa cgttgctact catgaccaca       600
     cggctttgaa gatgaccgca ccagtactta acatctatga tcagttggat aacgcccgtc       660
     gttcagtgct ctccgctaca gtcactcaga tgcctaagga aacagccgac gcgcacaagc       720
     tgcaaggaca cgtgactaag gaagttgctg ctgctgcttt gttaaagcct gaacatgtca       780
     ttgtcactcc gattatggca ggtttgccag ttttggctcg ctcacaccag ccctctctgc       840
     gcgtaggcat gccgctcgtg gaatccactc agaaagcctc actgtatcgc tcactgcccc       900
     atcagttagc tcatggttac cactctgaca ctttccgcac catgtttggc ctttctgcta       960
     acgaagctga gagtcgtcta atcggtcacc atcgcactat gctctgcacc ctcccagcca      1020
     ttgagacgtc tcccacagct gtcgcgcgag ctacgacatc accactctcg atcgtgtctt      1080
     ctgataaggt taccatgcat gagtgttcag ggtagatcac ctcctgacct aaatggtccc      1140
     ttgaccccac ttgggacagg gttagccgag acatggtatt catc                       1184
//