ID   EF026045; SV 1; linear; genomic RNA; STD; VRL; 1192 BP.
XX
AC   EF026045;
XX
DT   06-JUL-2007 (Rel. 92, Created)
DT   06-JUL-2007 (Rel. 92, Last updated, Version 1)
XX
DE   Melaka orthoreovirus segment S3, complete sequence.
XX
KW   .
XX
OS   Melaka orthoreovirus
OC   Viruses; Riboviria; Reoviridae; Spinareovirinae; Orthoreovirus;
OC   unclassified Orthoreovirus.
XX
RN   [1]
RP   1-1192
RX   DOI; 10.1073/pnas.0701372104.
RX   PUBMED; 17592121.
RA   Chua K.B., Crameri G., Hyatt A., Yu M., Tompang M.R., Rosli J.,
RA   McEachern J., Crameri S., Kumarasamy V., Eaton B.T., Wang L.F.;
RT   "A previously unknown reovirus of bat origin is associated with an acute
RT   respiratory disease in humans";
RL   Proc. Natl. Acad. Sci. U.S.A. 104(27):11424-11429(2007).
XX
RN   [2]
RP   1-1192
RA   Yu M., Chua K.B., Wang L.-F.;
RT   ;
RL   Submitted (26-SEP-2006) to the INSDC.
RL   Australian Animal Health Laboratory, CSIRO Livestock Industries, 5
RL   Portarlington Road, Geelong, VIC 3220, Australia
XX
DR   MD5; 5b34f2449b7ec0c7576993178d362ff4.
XX
CC   GenBank Accession Numbers EF026043-EF026046 represent the S
CC   segments of the Melaka orthoreovirus genome.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1192
FT                   /organism="Melaka orthoreovirus"
FT                   /segment="S3"
FT                   /mol_type="genomic RNA"
FT                   /country="Malaysia"
FT                   /note="S-class"
FT                   /db_xref="taxon:419697"
FT   CDS             29..1132
FT                   /codon_start=1
FT                   /product="sigma NS"
FT                   /note="nonstructural protein"
FT                   /db_xref="GOA:A6Y7R5"
FT                   /db_xref="InterPro:IPR002507"
FT                   /db_xref="UniProtKB/TrEMBL:A6Y7R5"
FT                   /protein_id="ABM67659.1"
FT                   /translation="MERSMRVGVSRNAAGTGSQTILRGFALLRCVLSADSRQATRAVQS
FT                   HFPGLGRMTKCLSPLTALSADRTVRHVNVSTVLSRDVKVLADYALTCHHPGDLPATLTP
FT                   VGLEAAKLVIAKFSERGMDLSHVLPPDASSYSPIVMCHLIARVMSGFVPMRGNDFGLEG
FT                   QIDLLAAELVPFSFMLPFLVNDDASAIAVPTARVEDMLQDISKLNQLDAAFGVESRSDQ
FT                   RMTKDVAEDSSRSLNELPSSENRGRMPWKLMLAFLTFQLKLELDALADQRSELQSQAHV
FT                   TSFGAKLFQQMSLFSTLDSELLSLALAIKDSGLVMNPIQILTKWQSIRTGSDTINPASF
FT                   SVVVRAGNWVLMKGEDAALTVRPGRIA"
XX
SQ   Sequence 1192 BP; 250 A; 305 C; 293 G; 344 T; 0 other;
     gcttaatttt tcctgttgag acgtgatcat ggagcgttct atgcgtgtcg gtgtctcgag        60
     aaacgctgcg ggtactgggt ctcagaccat actacgcggg tttgctctct tacggtgtgt       120
     actatcagct gattcacgtc aagctactcg cgctgttcaa tcccactttc caggtttagg       180
     gcgcatgact aaatgtctgt ctccgttgac tgccttatcc gcagatcgga ctgtccgcca       240
     cgttaacgta tctaccgtgc tttcacgtga tgtcaaggtg ctggctgatt atgctctgac       300
     ttgtcatcat ccgggtgact tgcctgctac tctgactcct gttggcctcg aagctgccaa       360
     actggtcatc gcgaagtttt cagaacgtgg tatggatttg tctcatgtcc tccctccaga       420
     tgcttcttcc tactcgccaa ttgtcatgtg tcacttgatt gctcgtgtaa tgtctgggtt       480
     cgtgccaatg cgaggtaacg atttcgggct agagggtcaa attgatctcc tcgctgctga       540
     gcttgttccc ttcagtttca tgctgccgtt cctcgttaac gatgatgctt cggctattgc       600
     tgtaccgacc gctcgcgtcg aggatatgct tcaggatatc tctaaactga accagttgga       660
     tgccgctttt ggtgtggagt ccagatctga tcaacgcatg actaaagatg ttgctgaaga       720
     ctcgtctaga tcactgaatg agctgcctag cagtgagaac cgtggtagaa tgccctggaa       780
     actcatgctt gcattcttga cattccagtt gaagttggag ttggacgcac tggctgatca       840
     acgttcggaa ctacaatccc aggcacacgt aacttccttt ggtgctaagc tcttccagca       900
     gatgtctttg ttctctacgc tcgacagtga gttgctctca ttagccctag caatcaagga       960
     ctccggattg gtaatgaatc caatacagat cttgaccaag tggcagtcta tccgtaccgg      1020
     ttcagacacc attaacccag cctcattctc agtcgtcgtt cgcgctggta attgggtatt      1080
     gatgaaaggt gaggacgcag ccctaactgt cagaccaggc cgcatcgcat aaatccatga      1140
     tcatgtgagc cacggagcca cacgtggtga gcatcgacag gagctattca tc              1192
//