ID   EF026043; SV 1; linear; genomic RNA; STD; VRL; 1605 BP.
XX
AC   EF026043;
XX
DT   06-JUL-2007 (Rel. 92, Created)
DT   06-JUL-2007 (Rel. 92, Last updated, Version 1)
XX
DE   Melaka orthoreovirus segment S1, complete sequence.
XX
KW   .
XX
OS   Melaka orthoreovirus
OC   Viruses; Riboviria; Reoviridae; Spinareovirinae; Orthoreovirus;
OC   unclassified Orthoreovirus.
XX
RN   [1]
RP   1-1605
RX   DOI; 10.1073/pnas.0701372104.
RX   PUBMED; 17592121.
RA   Chua K.B., Crameri G., Hyatt A., Yu M., Tompang M.R., Rosli J.,
RA   McEachern J., Crameri S., Kumarasamy V., Eaton B.T., Wang L.F.;
RT   "A previously unknown reovirus of bat origin is associated with an acute
RT   respiratory disease in humans";
RL   Proc. Natl. Acad. Sci. U.S.A. 104(27):11424-11429(2007).
XX
RN   [2]
RP   1-1605
RA   Yu M., Chua K.B., Wang L.-F.;
RT   ;
RL   Submitted (26-SEP-2006) to the INSDC.
RL   Australian Animal Health Laboratory, CSIRO Livestock Industries, 5
RL   Portarlington Road, Geelong, VIC 3220, Australia
XX
DR   MD5; 99a51bc2def8609d4e5f4a2d6c134a55.
DR   EuropePMC; PMC1899191; 17592121.
DR   EuropePMC; PMC4264558; 25433675.
DR   EuropePMC; PMC4762779; 26901882.
XX
CC   GenBank Accession Numbers EF026043-EF026046 represent the S
CC   segments of the Melaka orthoreovirus genome.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1605
FT                   /organism="Melaka orthoreovirus"
FT                   /segment="S1"
FT                   /mol_type="genomic RNA"
FT                   /country="Malaysia"
FT                   /note="S-class"
FT                   /db_xref="taxon:419697"
FT   CDS             30..317
FT                   /codon_start=1
FT                   /product="P10"
FT                   /note="membrane fusion protein"
FT                   /db_xref="GOA:A6Y7R1"
FT                   /db_xref="InterPro:IPR009854"
FT                   /db_xref="UniProtKB/TrEMBL:A6Y7R1"
FT                   /protein_id="ABM67655.1"
FT                   /translation="MSGDCAGLVSVFGSVHCQSSKNKAGGDLQATSILTTYWPHLAVGG
FT                   GIILVIFLLGLFYCCYLKWKTSHIRRTYHKELVALTRGYVRPISADVTSV"
FT   CDS             280..708
FT                   /codon_start=1
FT                   /product="P17"
FT                   /db_xref="InterPro:IPR009897"
FT                   /db_xref="UniProtKB/TrEMBL:A6Y7R2"
FT                   /protein_id="ABM67656.1"
FT                   /translation="MSGRSRRTLPVSDCSFYGPWIISGTYPVVSLICFREITYYINVDI
FT                   PLDHPQRVSLPHIATDPVVWHVQLVGRRAADSSKPYFCELDCVLIRVTPLTNHNRSHVI
FT                   IHYSPFAQSPAAKRSYRFDHDDDPEHKRFAIRSICSSR"
FT   CDS             584..1570
FT                   /codon_start=1
FT                   /product="sigma C"
FT                   /note="cell attachment protein"
FT                   /db_xref="UniProtKB/TrEMBL:A6Y7R3"
FT                   /protein_id="ABM67657.1"
FT                   /translation="MSSFTIHHSLNPQQRREVIALIMTMTQSISASRSDLSALRDELAS
FT                   LRTKVTDVSSQLALASSTITQLSTQCSALSAELASYSDTLSTLSSTIASHTDKLSELST
FT                   SLTSTSSRLDATADSVTQLSSDYASLRTDVTNLKSSLSTLAAQVNSLETKLNDTTQTVP
FT                   KQVLSPLAINDGTLTLNMNPRFCRDSAGLASYSSQTLLQTFSANLASSIPNTNLATTII
FT                   VHSHGSVSTFNLTSQHAFEPNAAKTQLTLDIRQFQPTPTDWSVLLAQPAFQASDFLGYA
FT                   WASVAGIWAPITLVGRVDSNPKVITLQLGTPSMDRITGLVLTFSIDT"
XX
SQ   Sequence 1605 BP; 364 A; 429 C; 337 G; 475 T; 0 other;
     gcttattttt tttgttctcg agtgtcgcta tgagtggtga ttgtgccggt ctggtttccg        60
     tgtttgggag tgtccattgt caatcatcta agaataaggc aggtggagat ttacaggcta       120
     cgtctatctt gactacttat tggcctcatc ttgctgttgg tggtggtatt atcctggtca       180
     tctttctgct cgggctgttc tactgctgtt acctcaagtg gaagacatct catattagac       240
     gtacttacca caaggagttg gttgcgctaa ctcgcggata tgtcaggccg atctcggcgg       300
     acgttaccag tgtctgattg ttcattttat ggaccctgga tcatctccgg cacttacccc       360
     gttgtaagcc ttatttgctt ccgcgagatc acttattaca tcaacgttga cattccacta       420
     gaccaccctc agcgtgttag tttgccgcac attgcaacgg atccagtggt ttggcacgtg       480
     cagctcgttg gtcgtcgtgc ggctgacagt tctaaaccct acttctgtga gctcgattgt       540
     gtccttattc gcgtgactcc tttaacaaat cacaatagat ctcatgtcat cattcactat       600
     tcaccattcg ctcaatcccc agcagcgaag agaagttatc gctttgatca tgacgatgac       660
     ccagagcata agcgcttcgc gatcagatct atctgctctt cgcgatgagt tagcatcttt       720
     gcgcacgaaa gtcactgatg tgtcttcgca gctggcattg gcttcttcaa ccatcacaca       780
     gctatctacg caatgtagcg ctctttcggc cgaattagcg tcctactctg acactcttag       840
     tacattgtct tcaaccatcg cctcccacac tgacaagctt tccgagcttt ccacttcact       900
     cactagtact tcctcaaggt tagacgccac tgccgactca gttactcaac tgtcatcaga       960
     ctacgcgtcc ttgaggactg atgttaccaa cctgaagtct agtttatcaa cgttggccgc      1020
     ccaagttaat tcattagaga ctaaactaaa tgatacaacc cagactgtgc cgaagcaagt      1080
     actgtctcca ttggcaatta acgatggaac tctgacactt aatatgaacc ctagattttg      1140
     tcgcgatagt gcaggtttgg cgtcttactc atctcagaca ctgctccaaa cattctcagc      1200
     gaacctggca tctagtattc ccaacactaa cttggccaca accatcattg ttcactccca      1260
     tgggagcgtg tctacgttta atttaacgag tcaacatgct tttgaaccta acgctgcgaa      1320
     aactcagctg actctcgata tcagacagtt ccagccaacg ccgactgact ggtccgtcct      1380
     actggctcaa ccagctttcc aggctagcga ttttctgggt tacgcatggg ctagtgttgc      1440
     tggtatctgg gctccaatta ctttagtagg ccgtgtcgat tccaatccta aagtaatcac      1500
     tcttcagctt ggcacaccct caatggaccg tattacaggt ctggtactca ctttctcaat      1560
     cgacacgtag ggggtggctc ccgccgtcga gaacagctat tcatc                      1605
//